data_1XHL
#
_model_server_result.job_id            VwBJoesJXFYFBi0JRXUIfQ 
_model_server_result.datetime_utc      '2025-03-06 08:37:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1xhl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1279}' 
#
_entry.id    1XHL 
#
_exptl.entry_id    1XHL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              139.195 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            8-METHYL-8-AZABICYCLO[3,2,1]OCTAN-3-ONE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1XHL 
_cell.length_a            109.589 
_cell.length_b            109.589 
_cell.length_c            162.591 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1XHL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_465 y-1,x+1,-z 0 1 0 1 0 0 0 0 -1 -109.589 109.589 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
_chem_comp.formula           'C8 H13 N O' 
_chem_comp.formula_weight    139.195 
_chem_comp.id                TNE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              8-METHYL-8-AZABICYCLO[3,2,1]OCTAN-3-ONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     TROPINONE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 TNE sing 388 n n 
C1 C7 TNE sing 389 n n 
C1 N8 TNE sing 390 n n 
C1 H1 TNE sing 391 n n 
C2 C3 TNE sing 392 n n 
C2 H21 TNE sing 393 n n 
C2 H22 TNE sing 394 n n 
C3 O3 TNE doub 395 n n 
C3 C4 TNE sing 396 n n 
C4 C5 TNE sing 397 n n 
C4 H41 TNE sing 398 n n 
C4 H42 TNE sing 399 n n 
C5 C6 TNE sing 400 n n 
C5 N8 TNE sing 401 n n 
C5 H5 TNE sing 402 n n 
C6 C7 TNE sing 403 n n 
C6 H61 TNE sing 404 n n 
C6 H62 TNE sing 405 n n 
C7 H71 TNE sing 406 n n 
C7 H72 TNE sing 407 n n 
N8 C9 TNE sing 408 n n 
C9 H91 TNE sing 409 n n 
C9 H92 TNE sing 410 n n 
C9 H93 TNE sing 411 n n 
#
_atom_sites.entry_id                     1XHL 
_atom_sites.fract_transf_matrix[1][1]    0.009125 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009125 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00615 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NDP A 1 1278 1278 NDP NDP . 
D 3 TNE A 1 1279 1279 TNE TNE . 
E 2 NDP B 1 2278 2278 NDP NDP . 
F 3 TNE B 1 2279 2279 TNE TNE . 
G 4 HOH A 1 1280 4 HOH HOH . 
G 4 HOH A 2 1281 5 HOH HOH . 
G 4 HOH A 3 1282 6 HOH HOH . 
G 4 HOH A 4 1283 9 HOH HOH . 
G 4 HOH A 5 1284 14 HOH HOH . 
G 4 HOH A 6 1285 15 HOH HOH . 
G 4 HOH A 7 1286 17 HOH HOH . 
G 4 HOH A 8 1287 18 HOH HOH . 
G 4 HOH A 9 1288 20 HOH HOH . 
G 4 HOH A 10 1289 21 HOH HOH . 
G 4 HOH A 11 1290 26 HOH HOH . 
G 4 HOH A 12 1291 27 HOH HOH . 
G 4 HOH A 13 1292 29 HOH HOH . 
G 4 HOH A 14 1293 32 HOH HOH . 
G 4 HOH A 15 1294 35 HOH HOH . 
G 4 HOH A 16 1295 36 HOH HOH . 
G 4 HOH A 17 1296 38 HOH HOH . 
G 4 HOH A 18 1297 40 HOH HOH . 
G 4 HOH A 19 1298 41 HOH HOH . 
G 4 HOH A 20 1299 45 HOH HOH . 
G 4 HOH A 21 1300 46 HOH HOH . 
G 4 HOH A 22 1301 47 HOH HOH . 
G 4 HOH A 23 1302 49 HOH HOH . 
G 4 HOH A 24 1303 52 HOH HOH . 
G 4 HOH A 25 1304 53 HOH HOH . 
G 4 HOH A 26 1305 54 HOH HOH . 
G 4 HOH A 27 1306 55 HOH HOH . 
G 4 HOH A 28 1307 57 HOH HOH . 
G 4 HOH A 29 1308 60 HOH HOH . 
G 4 HOH A 30 1309 61 HOH HOH . 
G 4 HOH A 31 1310 63 HOH HOH . 
G 4 HOH A 32 1311 66 HOH HOH . 
G 4 HOH A 33 1312 68 HOH HOH . 
G 4 HOH A 34 1313 74 HOH HOH . 
G 4 HOH A 35 1314 78 HOH HOH . 
G 4 HOH A 36 1315 80 HOH HOH . 
G 4 HOH A 37 1316 84 HOH HOH . 
G 4 HOH A 38 1317 86 HOH HOH . 
G 4 HOH A 39 1318 87 HOH HOH . 
G 4 HOH A 40 1319 89 HOH HOH . 
G 4 HOH A 41 1320 90 HOH HOH . 
G 4 HOH A 42 1321 91 HOH HOH . 
G 4 HOH A 43 1322 93 HOH HOH . 
G 4 HOH A 44 1323 96 HOH HOH . 
G 4 HOH A 45 1324 97 HOH HOH . 
G 4 HOH A 46 1325 102 HOH HOH . 
G 4 HOH A 47 1326 103 HOH HOH . 
G 4 HOH A 48 1327 107 HOH HOH . 
G 4 HOH A 49 1328 108 HOH HOH . 
G 4 HOH A 50 1329 110 HOH HOH . 
G 4 HOH A 51 1330 111 HOH HOH . 
G 4 HOH A 52 1331 113 HOH HOH . 
G 4 HOH A 53 1332 117 HOH HOH . 
G 4 HOH A 54 1333 118 HOH HOH . 
G 4 HOH A 55 1334 119 HOH HOH . 
G 4 HOH A 56 1335 121 HOH HOH . 
G 4 HOH A 57 1336 122 HOH HOH . 
G 4 HOH A 58 1337 125 HOH HOH . 
G 4 HOH A 59 1338 126 HOH HOH . 
G 4 HOH A 60 1339 127 HOH HOH . 
G 4 HOH A 61 1340 128 HOH HOH . 
G 4 HOH A 62 1341 134 HOH HOH . 
G 4 HOH A 63 1342 137 HOH HOH . 
G 4 HOH A 64 1343 140 HOH HOH . 
G 4 HOH A 65 1344 143 HOH HOH . 
G 4 HOH A 66 1345 144 HOH HOH . 
G 4 HOH A 67 1346 147 HOH HOH . 
G 4 HOH A 68 1347 148 HOH HOH . 
G 4 HOH A 69 1348 149 HOH HOH . 
G 4 HOH A 70 1349 154 HOH HOH . 
G 4 HOH A 71 1350 156 HOH HOH . 
G 4 HOH A 72 1351 157 HOH HOH . 
G 4 HOH A 73 1352 158 HOH HOH . 
G 4 HOH A 74 1353 160 HOH HOH . 
G 4 HOH A 75 1354 168 HOH HOH . 
G 4 HOH A 76 1355 169 HOH HOH . 
G 4 HOH A 77 1356 170 HOH HOH . 
G 4 HOH A 78 1357 172 HOH HOH . 
G 4 HOH A 79 1358 176 HOH HOH . 
G 4 HOH A 80 1359 178 HOH HOH . 
G 4 HOH A 81 1360 179 HOH HOH . 
G 4 HOH A 82 1361 182 HOH HOH . 
G 4 HOH A 83 1362 183 HOH HOH . 
G 4 HOH A 84 1363 185 HOH HOH . 
G 4 HOH A 85 1364 186 HOH HOH . 
G 4 HOH A 86 1365 187 HOH HOH . 
G 4 HOH A 87 1366 193 HOH HOH . 
G 4 HOH A 88 1367 198 HOH HOH . 
G 4 HOH A 89 1368 199 HOH HOH . 
G 4 HOH A 90 1369 200 HOH HOH . 
G 4 HOH A 91 1370 204 HOH HOH . 
G 4 HOH A 92 1371 205 HOH HOH . 
G 4 HOH A 93 1372 207 HOH HOH . 
G 4 HOH A 94 1373 208 HOH HOH . 
G 4 HOH A 95 1374 211 HOH HOH . 
G 4 HOH A 96 1375 217 HOH HOH . 
G 4 HOH A 97 1376 220 HOH HOH . 
G 4 HOH A 98 1377 224 HOH HOH . 
G 4 HOH A 99 1378 225 HOH HOH . 
G 4 HOH A 100 1379 227 HOH HOH . 
G 4 HOH A 101 1380 229 HOH HOH . 
G 4 HOH A 102 1381 230 HOH HOH . 
G 4 HOH A 103 1382 231 HOH HOH . 
G 4 HOH A 104 1383 234 HOH HOH . 
G 4 HOH A 105 1384 235 HOH HOH . 
G 4 HOH A 106 1385 237 HOH HOH . 
G 4 HOH A 107 1386 238 HOH HOH . 
G 4 HOH A 108 1387 240 HOH HOH . 
G 4 HOH A 109 1388 242 HOH HOH . 
G 4 HOH A 110 1389 246 HOH HOH . 
G 4 HOH A 111 1390 249 HOH HOH . 
G 4 HOH A 112 1391 251 HOH HOH . 
H 4 HOH B 1 2280 7 HOH HOH . 
H 4 HOH B 2 2281 8 HOH HOH . 
H 4 HOH B 3 2282 10 HOH HOH . 
H 4 HOH B 4 2283 11 HOH HOH . 
H 4 HOH B 5 2284 12 HOH HOH . 
H 4 HOH B 6 2285 13 HOH HOH . 
H 4 HOH B 7 2286 16 HOH HOH . 
H 4 HOH B 8 2287 22 HOH HOH . 
H 4 HOH B 9 2288 23 HOH HOH . 
H 4 HOH B 10 2289 24 HOH HOH . 
H 4 HOH B 11 2290 25 HOH HOH . 
H 4 HOH B 12 2291 28 HOH HOH . 
H 4 HOH B 13 2292 30 HOH HOH . 
H 4 HOH B 14 2293 31 HOH HOH . 
H 4 HOH B 15 2294 33 HOH HOH . 
H 4 HOH B 16 2295 34 HOH HOH . 
H 4 HOH B 17 2296 37 HOH HOH . 
H 4 HOH B 18 2297 39 HOH HOH . 
H 4 HOH B 19 2298 42 HOH HOH . 
H 4 HOH B 20 2299 43 HOH HOH . 
H 4 HOH B 21 2300 44 HOH HOH . 
H 4 HOH B 22 2301 48 HOH HOH . 
H 4 HOH B 23 2302 50 HOH HOH . 
H 4 HOH B 24 2303 51 HOH HOH . 
H 4 HOH B 25 2304 56 HOH HOH . 
H 4 HOH B 26 2305 58 HOH HOH . 
H 4 HOH B 27 2306 59 HOH HOH . 
H 4 HOH B 28 2307 62 HOH HOH . 
H 4 HOH B 29 2308 64 HOH HOH . 
H 4 HOH B 30 2309 65 HOH HOH . 
H 4 HOH B 31 2310 69 HOH HOH . 
H 4 HOH B 32 2311 70 HOH HOH . 
H 4 HOH B 33 2312 71 HOH HOH . 
H 4 HOH B 34 2313 72 HOH HOH . 
H 4 HOH B 35 2314 73 HOH HOH . 
H 4 HOH B 36 2315 75 HOH HOH . 
H 4 HOH B 37 2316 76 HOH HOH . 
H 4 HOH B 38 2317 77 HOH HOH . 
H 4 HOH B 39 2318 79 HOH HOH . 
H 4 HOH B 40 2319 81 HOH HOH . 
H 4 HOH B 41 2320 85 HOH HOH . 
H 4 HOH B 42 2321 88 HOH HOH . 
H 4 HOH B 43 2322 92 HOH HOH . 
H 4 HOH B 44 2323 94 HOH HOH . 
H 4 HOH B 45 2324 95 HOH HOH . 
H 4 HOH B 46 2325 98 HOH HOH . 
H 4 HOH B 47 2326 99 HOH HOH . 
H 4 HOH B 48 2327 100 HOH HOH . 
H 4 HOH B 49 2328 101 HOH HOH . 
H 4 HOH B 50 2329 104 HOH HOH . 
H 4 HOH B 51 2330 105 HOH HOH . 
H 4 HOH B 52 2331 106 HOH HOH . 
H 4 HOH B 53 2332 114 HOH HOH . 
H 4 HOH B 54 2333 116 HOH HOH . 
H 4 HOH B 55 2334 120 HOH HOH . 
H 4 HOH B 56 2335 123 HOH HOH . 
H 4 HOH B 57 2336 124 HOH HOH . 
H 4 HOH B 58 2337 129 HOH HOH . 
H 4 HOH B 59 2338 130 HOH HOH . 
H 4 HOH B 60 2339 132 HOH HOH . 
H 4 HOH B 61 2340 133 HOH HOH . 
H 4 HOH B 62 2341 135 HOH HOH . 
H 4 HOH B 63 2342 136 HOH HOH . 
H 4 HOH B 64 2343 138 HOH HOH . 
H 4 HOH B 65 2344 139 HOH HOH . 
H 4 HOH B 66 2345 142 HOH HOH . 
H 4 HOH B 67 2346 145 HOH HOH . 
H 4 HOH B 68 2347 150 HOH HOH . 
H 4 HOH B 69 2348 151 HOH HOH . 
H 4 HOH B 70 2349 152 HOH HOH . 
H 4 HOH B 71 2350 153 HOH HOH . 
H 4 HOH B 72 2351 155 HOH HOH . 
H 4 HOH B 73 2352 159 HOH HOH . 
H 4 HOH B 74 2353 161 HOH HOH . 
H 4 HOH B 75 2354 165 HOH HOH . 
H 4 HOH B 76 2355 166 HOH HOH . 
H 4 HOH B 77 2356 167 HOH HOH . 
H 4 HOH B 78 2357 171 HOH HOH . 
H 4 HOH B 79 2358 173 HOH HOH . 
H 4 HOH B 80 2359 174 HOH HOH . 
H 4 HOH B 81 2360 175 HOH HOH . 
H 4 HOH B 82 2361 177 HOH HOH . 
H 4 HOH B 83 2362 180 HOH HOH . 
H 4 HOH B 84 2363 181 HOH HOH . 
H 4 HOH B 85 2364 184 HOH HOH . 
H 4 HOH B 86 2365 188 HOH HOH . 
H 4 HOH B 87 2366 189 HOH HOH . 
H 4 HOH B 88 2367 190 HOH HOH . 
H 4 HOH B 89 2368 191 HOH HOH . 
H 4 HOH B 90 2369 192 HOH HOH . 
H 4 HOH B 91 2370 194 HOH HOH . 
H 4 HOH B 92 2371 195 HOH HOH . 
H 4 HOH B 93 2372 196 HOH HOH . 
H 4 HOH B 94 2373 197 HOH HOH . 
H 4 HOH B 95 2374 201 HOH HOH . 
H 4 HOH B 96 2375 202 HOH HOH . 
H 4 HOH B 97 2376 203 HOH HOH . 
H 4 HOH B 98 2377 206 HOH HOH . 
H 4 HOH B 99 2378 209 HOH HOH . 
H 4 HOH B 100 2379 210 HOH HOH . 
H 4 HOH B 101 2380 212 HOH HOH . 
H 4 HOH B 102 2381 213 HOH HOH . 
H 4 HOH B 103 2382 214 HOH HOH . 
H 4 HOH B 104 2383 216 HOH HOH . 
H 4 HOH B 105 2384 218 HOH HOH . 
H 4 HOH B 106 2385 221 HOH HOH . 
H 4 HOH B 107 2386 222 HOH HOH . 
H 4 HOH B 108 2387 223 HOH HOH . 
H 4 HOH B 109 2388 226 HOH HOH . 
H 4 HOH B 110 2389 228 HOH HOH . 
H 4 HOH B 111 2390 232 HOH HOH . 
H 4 HOH B 112 2391 233 HOH HOH . 
H 4 HOH B 113 2392 236 HOH HOH . 
H 4 HOH B 114 2393 239 HOH HOH . 
H 4 HOH B 115 2394 241 HOH HOH . 
H 4 HOH B 116 2395 243 HOH HOH . 
H 4 HOH B 117 2396 244 HOH HOH . 
H 4 HOH B 118 2397 245 HOH HOH . 
H 4 HOH B 119 2398 247 HOH HOH . 
H 4 HOH B 120 2399 248 HOH HOH . 
H 4 HOH B 121 2400 250 HOH HOH . 
H 4 HOH B 122 2401 252 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 TNE . . . D 3 6.979 119.837 17.631 1 67.49 ? C1 TNE 1279 A 1 
HETATM 2 C C2 TNE . . . D 3 6.08 120.087 18.913 1 66.65 ? C2 TNE 1279 A 1 
HETATM 3 C C3 TNE . . . D 3 5.967 118.754 19.815 1 66.39 ? C3 TNE 1279 A 1 
HETATM 4 O O3 TNE . . . D 3 5.16 118.691 20.746 1 65.98 ? O3 TNE 1279 A 1 
HETATM 5 C C4 TNE . . . D 3 6.917 117.496 19.478 1 66.99 ? C4 TNE 1279 A 1 
HETATM 6 C C5 TNE . . . D 3 7.655 117.67 18.103 1 67.7 ? C5 TNE 1279 A 1 
HETATM 7 C C6 TNE . . . D 3 8.941 118.514 18.331 1 67.28 ? C6 TNE 1279 A 1 
HETATM 8 C C7 TNE . . . D 3 8.496 119.971 18.008 1 67.09 ? C7 TNE 1279 A 1 
HETATM 9 N N8 TNE . . . D 3 6.793 118.438 17.174 1 67.64 ? N8 TNE 1279 A 1 
HETATM 10 C C9 TNE . . . D 3 7.253 118.28 15.748 1 68.55 ? C9 TNE 1279 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#