data_1XLO # _model_server_result.job_id 7JBiIh5FFlfzZOgVBBwCTQ _model_server_result.datetime_utc '2025-07-17 23:49:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xlo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":107}' # _entry.id 1XLO # _exptl.entry_id 1XLO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.82 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE2/S2 (INORGANIC) CLUSTER' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1XLO _cell.length_a 50.098 _cell.length_b 75.097 _cell.length_c 108.108 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XLO _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 39 A CYS 39 1_555 C FE1 FES . A FES 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc2 A SG CYS 45 A CYS 45 1_555 C FE1 FES . A FES 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc3 A SG CYS 48 A CYS 48 1_555 C FE2 FES . A FES 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc4 A SG CYS 86 A CYS 86 1_555 C FE2 FES . A FES 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc5 B SG CYS 39 B CYS 39 1_555 D FE1 FES . B FES 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc6 B SG CYS 45 B CYS 45 1_555 D FE1 FES . B FES 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc7 B SG CYS 48 B CYS 48 1_555 D FE2 FES . B FES 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc8 B SG CYS 86 B CYS 86 1_555 D FE2 FES . B FES 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? # _chem_comp.formula 'Fe2 S2' _chem_comp.formula_weight 175.82 _chem_comp.id FES _chem_comp.mon_nstd_flag . _chem_comp.name 'FE2/S2 (INORGANIC) CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S1 FES sing 83 n n FE1 S2 FES sing 84 n n FE2 S1 FES sing 85 n n FE2 S2 FES sing 86 n n # _atom_sites.entry_id 1XLO _atom_sites.fract_transf_matrix[1][1] 0.019961 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013316 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00925 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FES A 1 107 107 FES FES . D 2 FES B 1 107 107 FES FES . E 3 HOH A 1 108 3 HOH HOH . E 3 HOH A 2 109 5 HOH HOH . E 3 HOH A 3 110 8 HOH HOH . E 3 HOH A 4 111 15 HOH HOH . E 3 HOH A 5 112 16 HOH HOH . E 3 HOH A 6 113 18 HOH HOH . E 3 HOH A 7 114 21 HOH HOH . E 3 HOH A 8 115 28 HOH HOH . E 3 HOH A 9 116 31 HOH HOH . E 3 HOH A 10 117 35 HOH HOH . E 3 HOH A 11 118 37 HOH HOH . E 3 HOH A 12 119 39 HOH HOH . E 3 HOH A 13 120 42 HOH HOH . E 3 HOH A 14 121 45 HOH HOH . E 3 HOH A 15 122 46 HOH HOH . E 3 HOH A 16 123 49 HOH HOH . E 3 HOH A 17 124 54 HOH HOH . E 3 HOH A 18 125 57 HOH HOH . E 3 HOH A 19 126 64 HOH HOH . E 3 HOH A 20 127 72 HOH HOH . E 3 HOH A 21 128 73 HOH HOH . E 3 HOH A 22 129 79 HOH HOH . E 3 HOH A 23 130 83 HOH HOH . E 3 HOH A 24 131 89 HOH HOH . E 3 HOH A 25 132 91 HOH HOH . E 3 HOH A 26 133 92 HOH HOH . E 3 HOH A 27 134 95 HOH HOH . E 3 HOH A 28 135 99 HOH HOH . E 3 HOH A 29 136 102 HOH HOH . E 3 HOH A 30 137 105 HOH HOH . E 3 HOH A 31 138 106 HOH HOH . E 3 HOH A 32 139 107 HOH HOH . E 3 HOH A 33 140 111 HOH HOH . E 3 HOH A 34 141 114 HOH HOH . E 3 HOH A 35 142 118 HOH HOH . E 3 HOH A 36 143 119 HOH HOH . E 3 HOH A 37 144 120 HOH HOH . E 3 HOH A 38 145 121 HOH HOH . E 3 HOH A 39 146 122 HOH HOH . E 3 HOH A 40 147 123 HOH HOH . E 3 HOH A 41 148 125 HOH HOH . E 3 HOH A 42 149 126 HOH HOH . E 3 HOH A 43 150 127 HOH HOH . E 3 HOH A 44 151 128 HOH HOH . E 3 HOH A 45 152 147 HOH HOH . E 3 HOH A 46 153 148 HOH HOH . E 3 HOH A 47 154 149 HOH HOH . E 3 HOH A 48 155 150 HOH HOH . F 3 HOH B 1 108 1 HOH HOH . F 3 HOH B 2 109 2 HOH HOH . F 3 HOH B 3 110 4 HOH HOH . F 3 HOH B 4 111 6 HOH HOH . F 3 HOH B 5 112 7 HOH HOH . F 3 HOH B 6 113 9 HOH HOH . F 3 HOH B 7 114 10 HOH HOH . F 3 HOH B 8 115 11 HOH HOH . F 3 HOH B 9 116 12 HOH HOH . F 3 HOH B 10 117 13 HOH HOH . F 3 HOH B 11 118 14 HOH HOH . F 3 HOH B 12 119 17 HOH HOH . F 3 HOH B 13 120 19 HOH HOH . F 3 HOH B 14 121 20 HOH HOH . F 3 HOH B 15 122 22 HOH HOH . F 3 HOH B 16 123 23 HOH HOH . F 3 HOH B 17 124 24 HOH HOH . F 3 HOH B 18 125 25 HOH HOH . F 3 HOH B 19 126 26 HOH HOH . F 3 HOH B 20 127 27 HOH HOH . F 3 HOH B 21 128 29 HOH HOH . F 3 HOH B 22 129 30 HOH HOH . F 3 HOH B 23 130 32 HOH HOH . F 3 HOH B 24 131 33 HOH HOH . F 3 HOH B 25 132 34 HOH HOH . F 3 HOH B 26 133 36 HOH HOH . F 3 HOH B 27 134 38 HOH HOH . F 3 HOH B 28 135 40 HOH HOH . F 3 HOH B 29 136 41 HOH HOH . F 3 HOH B 30 137 43 HOH HOH . F 3 HOH B 31 138 44 HOH HOH . F 3 HOH B 32 139 47 HOH HOH . F 3 HOH B 33 140 48 HOH HOH . F 3 HOH B 34 141 50 HOH HOH . F 3 HOH B 35 142 51 HOH HOH . F 3 HOH B 36 143 52 HOH HOH . F 3 HOH B 37 144 53 HOH HOH . F 3 HOH B 38 145 55 HOH HOH . F 3 HOH B 39 146 56 HOH HOH . F 3 HOH B 40 147 58 HOH HOH . F 3 HOH B 41 148 59 HOH HOH . F 3 HOH B 42 149 60 HOH HOH . F 3 HOH B 43 150 61 HOH HOH . F 3 HOH B 44 151 62 HOH HOH . F 3 HOH B 45 152 63 HOH HOH . F 3 HOH B 46 153 65 HOH HOH . F 3 HOH B 47 154 66 HOH HOH . F 3 HOH B 48 155 67 HOH HOH . F 3 HOH B 49 156 68 HOH HOH . F 3 HOH B 50 157 69 HOH HOH . F 3 HOH B 51 158 70 HOH HOH . F 3 HOH B 52 159 71 HOH HOH . F 3 HOH B 53 160 74 HOH HOH . F 3 HOH B 54 161 75 HOH HOH . F 3 HOH B 55 162 76 HOH HOH . F 3 HOH B 56 163 77 HOH HOH . F 3 HOH B 57 164 78 HOH HOH . F 3 HOH B 58 165 80 HOH HOH . F 3 HOH B 59 166 81 HOH HOH . F 3 HOH B 60 167 82 HOH HOH . F 3 HOH B 61 168 84 HOH HOH . F 3 HOH B 62 169 85 HOH HOH . F 3 HOH B 63 170 86 HOH HOH . F 3 HOH B 64 171 87 HOH HOH . F 3 HOH B 65 172 88 HOH HOH . F 3 HOH B 66 173 90 HOH HOH . F 3 HOH B 67 174 93 HOH HOH . F 3 HOH B 68 175 94 HOH HOH . F 3 HOH B 69 176 96 HOH HOH . F 3 HOH B 70 177 97 HOH HOH . F 3 HOH B 71 178 98 HOH HOH . F 3 HOH B 72 179 100 HOH HOH . F 3 HOH B 73 180 101 HOH HOH . F 3 HOH B 74 181 103 HOH HOH . F 3 HOH B 75 182 104 HOH HOH . F 3 HOH B 76 183 108 HOH HOH . F 3 HOH B 77 184 109 HOH HOH . F 3 HOH B 78 185 110 HOH HOH . F 3 HOH B 79 186 112 HOH HOH . F 3 HOH B 80 187 113 HOH HOH . F 3 HOH B 81 188 115 HOH HOH . F 3 HOH B 82 189 116 HOH HOH . F 3 HOH B 83 190 117 HOH HOH . F 3 HOH B 84 191 124 HOH HOH . F 3 HOH B 85 192 129 HOH HOH . F 3 HOH B 86 193 130 HOH HOH . F 3 HOH B 87 194 131 HOH HOH . F 3 HOH B 88 195 132 HOH HOH . F 3 HOH B 89 196 133 HOH HOH . F 3 HOH B 90 197 134 HOH HOH . F 3 HOH B 91 198 135 HOH HOH . F 3 HOH B 92 199 136 HOH HOH . F 3 HOH B 93 200 137 HOH HOH . F 3 HOH B 94 201 138 HOH HOH . F 3 HOH B 95 202 139 HOH HOH . F 3 HOH B 96 203 140 HOH HOH . F 3 HOH B 97 204 141 HOH HOH . F 3 HOH B 98 205 142 HOH HOH . F 3 HOH B 99 206 143 HOH HOH . F 3 HOH B 100 207 144 HOH HOH . F 3 HOH B 101 208 145 HOH HOH . F 3 HOH B 102 209 146 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 FES . . . C 2 3.438 7.402 37.698 1 30.32 ? FE1 FES 107 A 1 HETATM 2 FE FE2 FES . . . C 2 6.042 8.282 37.642 1 28.27 ? FE2 FES 107 A 1 HETATM 3 S S1 FES . . . C 2 5.202 6.314 38.343 1 28.98 ? S1 FES 107 A 1 HETATM 4 S S2 FES . . . C 2 4.172 9.404 36.975 1 28.2 ? S2 FES 107 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #