data_1XLS # _model_server_result.job_id RaxhsIukdeTeGt-Q51a9fQ _model_server_result.datetime_utc '2025-02-26 21:57:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xls # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":805}' # _entry.id 1XLS # _exptl.entry_id 1XLS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 402.059 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,5-DICHLORO-2-{4-[(3,5-DICHLOROPYRIDIN-2-YL)OXY]PHENOXY}PYRIDINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 79.02 _cell.angle_beta 85.81 _cell.angle_gamma 67.22 _cell.entry_id 1XLS _cell.length_a 68.271 _cell.length_b 88.381 _cell.length_c 105.494 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XLS _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 PISA tetrameric 4 author_and_software_defined_assembly 3 PISA tetrameric 4 author_and_software_defined_assembly 4 PISA hexadecameric 16 software_defined_assembly 5 PISA octameric 8 software_defined_assembly 6 PISA octameric 8 software_defined_assembly 7 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,I,M,Q,U,Y,CA,GA,KA 1 1 B,F,J,N,R,V,Z,DA,HA 2 1 C,G,K,O,S,W,AA,EA,IA,LA 3 1 D,H,L,P,T,X,BA,FA,JA,MA 4 1 B,F,J,N,R,V,Z,DA,HA 5 2 D,H,L,P,T,X,BA,FA,JA,MA 5 3 A,C,E,G,I,K,M,O,Q,S,U,W,Y,AA,CA,EA,GA,IA,KA,LA 5 1 A,C,E,G,I,K,M,O,Q,S,U,W,Y,AA,CA,EA,GA,IA,KA,LA 6 1 B,F,J,N,R,V,Z,DA,HA 7 1 D,H,L,P,T,X,BA,FA,JA,MA 7 4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_546 x,y-1,z+1 1 0 0 0 1 0 0 0 1 -26.512745 -62.931104 103.562769 3 'crystal symmetry operation' 1_646 x+1,y-1,z+1 1 0 0 0 1 0 0 0 1 41.758255 -62.931104 103.562769 4 'crystal symmetry operation' 1_655 x+1,y,z 1 0 0 0 1 0 0 0 1 68.271 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 U N N ? 5 V N N ? 5 W N N ? 5 X N N # _chem_comp.formula 'C16 H8 Cl4 N2 O2' _chem_comp.formula_weight 402.059 _chem_comp.id TCD _chem_comp.mon_nstd_flag . _chem_comp.name 3,5-DICHLORO-2-{4-[(3,5-DICHLOROPYRIDIN-2-YL)OXY]PHENOXY}PYRIDINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O21 TCD sing 340 n n C1 C2 TCD sing 341 n y C1 C6 TCD doub 342 n y O21 C22 TCD sing 343 n n C2 C3 TCD doub 344 n y C2 H2 TCD sing 345 n n C3 C4 TCD sing 346 n y C3 H3 TCD sing 347 n n C4 O31 TCD sing 348 n n C4 C5 TCD doub 349 n y O31 C32 TCD sing 350 n n C5 C6 TCD sing 351 n y C5 H5 TCD sing 352 n n C6 H6 TCD sing 353 n n C22 N23 TCD sing 354 n y C22 C27 TCD doub 355 n y N23 C24 TCD doub 356 n y C24 C25 TCD sing 357 n y C24 H24 TCD sing 358 n n C25 CL25 TCD sing 359 n n C25 C26 TCD doub 360 n y C26 C27 TCD sing 361 n y C26 H26 TCD sing 362 n n C27 CL27 TCD sing 363 n n C32 N33 TCD sing 364 n y C32 C37 TCD doub 365 n y N33 C34 TCD doub 366 n y C34 C35 TCD sing 367 n y C34 H34 TCD sing 368 n n C35 CL35 TCD sing 369 n n C35 C36 TCD doub 370 n y C36 C37 TCD sing 371 n y C36 H36 TCD sing 372 n n C37 CL37 TCD sing 373 n n # _atom_sites.entry_id 1XLS _atom_sites.fract_transf_matrix[1][1] 0.014648 _atom_sites.fract_transf_matrix[1][2] -0.006153 _atom_sites.fract_transf_matrix[1][3] 0.000013 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012272 _atom_sites.fract_transf_matrix[2][3] -0.0022 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009656 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Q 4 9CR A 1 801 1 9CR UNK . R 4 9CR B 1 802 1 9CR UNK . S 4 9CR C 1 803 1 9CR UNK . T 4 9CR D 1 804 1 9CR UNK . U 5 TCD E 1 805 1 TCD TCP . V 5 TCD F 1 806 1 TCD TCP . W 5 TCD G 1 807 1 TCD TCP . X 5 TCD H 1 808 1 TCD TCP . Y 6 HOH A 1 44 44 HOH TIP . Y 6 HOH A 2 49 49 HOH TIP . Y 6 HOH A 3 57 57 HOH TIP . Y 6 HOH A 4 64 64 HOH TIP . Y 6 HOH A 5 72 72 HOH TIP . Y 6 HOH A 6 74 74 HOH TIP . Y 6 HOH A 7 78 78 HOH TIP . Z 6 HOH B 1 1 1 HOH TIP . Z 6 HOH B 2 14 14 HOH TIP . Z 6 HOH B 3 23 23 HOH TIP . Z 6 HOH B 4 46 46 HOH TIP . Z 6 HOH B 5 59 59 HOH TIP . Z 6 HOH B 6 80 80 HOH TIP . Z 6 HOH B 7 84 84 HOH TIP . Z 6 HOH B 8 85 85 HOH TIP . AA 6 HOH C 1 10 10 HOH TIP . AA 6 HOH C 2 13 13 HOH TIP . AA 6 HOH C 3 16 16 HOH TIP . AA 6 HOH C 4 19 19 HOH TIP . AA 6 HOH C 5 36 36 HOH TIP . AA 6 HOH C 6 41 41 HOH TIP . AA 6 HOH C 7 42 42 HOH TIP . AA 6 HOH C 8 58 58 HOH TIP . AA 6 HOH C 9 68 68 HOH TIP . AA 6 HOH C 10 70 70 HOH TIP . BA 6 HOH D 1 3 3 HOH TIP . BA 6 HOH D 2 4 4 HOH TIP . BA 6 HOH D 3 6 6 HOH TIP . BA 6 HOH D 4 11 11 HOH TIP . BA 6 HOH D 5 12 12 HOH TIP . BA 6 HOH D 6 15 15 HOH TIP . BA 6 HOH D 7 17 17 HOH TIP . BA 6 HOH D 8 18 18 HOH TIP . BA 6 HOH D 9 20 20 HOH TIP . BA 6 HOH D 10 21 21 HOH TIP . BA 6 HOH D 11 28 28 HOH TIP . BA 6 HOH D 12 35 35 HOH TIP . BA 6 HOH D 13 37 37 HOH TIP . BA 6 HOH D 14 40 40 HOH TIP . BA 6 HOH D 15 45 45 HOH TIP . BA 6 HOH D 16 47 47 HOH TIP . BA 6 HOH D 17 52 52 HOH TIP . BA 6 HOH D 18 60 60 HOH TIP . BA 6 HOH D 19 61 61 HOH TIP . BA 6 HOH D 20 66 66 HOH TIP . CA 6 HOH E 1 25 25 HOH TIP . CA 6 HOH E 2 50 50 HOH TIP . CA 6 HOH E 3 79 79 HOH TIP . CA 6 HOH E 4 83 83 HOH TIP . DA 6 HOH F 1 9 9 HOH TIP . DA 6 HOH F 2 24 24 HOH TIP . DA 6 HOH F 3 27 27 HOH TIP . DA 6 HOH F 4 31 31 HOH TIP . DA 6 HOH F 5 33 33 HOH TIP . DA 6 HOH F 6 43 43 HOH TIP . DA 6 HOH F 7 48 48 HOH TIP . DA 6 HOH F 8 51 51 HOH TIP . DA 6 HOH F 9 53 53 HOH TIP . DA 6 HOH F 10 54 54 HOH TIP . DA 6 HOH F 11 56 56 HOH TIP . DA 6 HOH F 12 67 67 HOH TIP . DA 6 HOH F 13 69 69 HOH TIP . DA 6 HOH F 14 81 81 HOH TIP . DA 6 HOH F 15 82 82 HOH TIP . DA 6 HOH F 16 86 86 HOH TIP . DA 6 HOH F 17 88 88 HOH TIP . EA 6 HOH G 1 2 2 HOH TIP . EA 6 HOH G 2 26 26 HOH TIP . EA 6 HOH G 3 29 29 HOH TIP . EA 6 HOH G 4 32 32 HOH TIP . EA 6 HOH G 5 39 39 HOH TIP . EA 6 HOH G 6 63 63 HOH TIP . EA 6 HOH G 7 65 65 HOH TIP . EA 6 HOH G 8 73 73 HOH TIP . EA 6 HOH G 9 76 76 HOH TIP . EA 6 HOH G 10 87 87 HOH TIP . FA 6 HOH H 1 5 5 HOH TIP . FA 6 HOH H 2 22 22 HOH TIP . FA 6 HOH H 3 71 71 HOH TIP . FA 6 HOH H 4 77 77 HOH TIP . GA 6 HOH I 1 75 75 HOH TIP . HA 6 HOH J 1 38 38 HOH TIP . IA 6 HOH K 1 55 55 HOH TIP . JA 6 HOH L 1 8 8 HOH TIP . KA 6 HOH M 1 30 30 HOH TIP . LA 6 HOH O 1 62 62 HOH TIP . MA 6 HOH P 1 7 7 HOH TIP . MA 6 HOH P 2 34 34 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TCD . . . U 5 3.212 -11.514 42.952 1 43.72 ? C1 TCD 805 E 1 HETATM 2 O O21 TCD . . . U 5 4.368 -12.186 43.274 1 45.47 ? O21 TCD 805 E 1 HETATM 3 C C2 TCD . . . U 5 2.626 -10.558 43.81 1 43.31 ? C2 TCD 805 E 1 HETATM 4 C C3 TCD . . . U 5 1.454 -9.935 43.446 1 41.08 ? C3 TCD 805 E 1 HETATM 5 C C4 TCD . . . U 5 0.861 -10.168 42.189 1 42.16 ? C4 TCD 805 E 1 HETATM 6 O O31 TCD . . . U 5 -0.27 -9.479 41.957 1 41.68 ? O31 TCD 805 E 1 HETATM 7 C C5 TCD . . . U 5 1.44 -11.119 41.314 1 41.22 ? C5 TCD 805 E 1 HETATM 8 C C6 TCD . . . U 5 2.625 -11.744 41.696 1 42.21 ? C6 TCD 805 E 1 HETATM 9 C C22 TCD . . . U 5 4.224 -13.113 44.294 1 38.07 ? C22 TCD 805 E 1 HETATM 10 N N23 TCD . . . U 5 2.914 -13.38 44.66 1 45.66 ? N23 TCD 805 E 1 HETATM 11 C C24 TCD . . . U 5 2.6 -14.252 45.634 1 44.36 ? C24 TCD 805 E 1 HETATM 12 C C25 TCD . . . U 5 3.527 -14.964 46.361 1 41.6 ? C25 TCD 805 E 1 HETATM 13 CL CL25 TCD . . . U 5 3.035 -16.081 47.624 1 54 ? CL25 TCD 805 E 1 HETATM 14 C C26 TCD . . . U 5 4.868 -14.761 46.061 1 37.32 ? C26 TCD 805 E 1 HETATM 15 C C27 TCD . . . U 5 5.303 -13.779 44.959 1 27.3 ? C27 TCD 805 E 1 HETATM 16 CL CL27 TCD . . . U 5 7.002 -13.527 44.576 1 54 ? CL27 TCD 805 E 1 HETATM 17 C C32 TCD . . . U 5 -1.526 -10.055 41.799 1 40.28 ? C32 TCD 805 E 1 HETATM 18 N N33 TCD . . . U 5 -1.738 -11.347 42.132 1 39.55 ? N33 TCD 805 E 1 HETATM 19 C C34 TCD . . . U 5 -2.968 -11.905 41.985 1 41 ? C34 TCD 805 E 1 HETATM 20 C C35 TCD . . . U 5 -4.085 -11.179 41.49 1 36.6 ? C35 TCD 805 E 1 HETATM 21 CL CL35 TCD . . . U 5 -5.679 -11.915 41.332 1 54 ? CL35 TCD 805 E 1 HETATM 22 C C36 TCD . . . U 5 -3.842 -9.828 41.159 1 45.29 ? C36 TCD 805 E 1 HETATM 23 C C37 TCD . . . U 5 -2.592 -9.252 41.298 1 48.32 ? C37 TCD 805 E 1 HETATM 24 CL CL37 TCD . . . U 5 -2.345 -7.564 40.841 1 54 ? CL37 TCD 805 E 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 24 #