data_1XLX # _model_server_result.job_id QROQiArlOvRY_UWO7hS1lg _model_server_result.datetime_utc '2024-10-11 00:28:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xlx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":101}' # _entry.id 1XLX # _exptl.entry_id 1XLX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 343.417 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CILOMILAST _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1XLX _cell.length_a 89.274 _cell.length_b 94.259 _cell.length_c 106.078 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XLX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 63 A THR 193 1_555 A N CME 64 A CME 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? covale ? covale2 A C CME 64 A CME 194 1_555 A N ILE 65 A ILE 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? metalc ? metalc1 C ZN ZN . A ZN 1001 1_555 A NE2 HIS 108 A HIS 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc2 C ZN ZN . A ZN 1001 1_555 I O HOH . A HOH 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc3 C ZN ZN . A ZN 1001 1_555 A NE2 HIS 144 A HIS 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc4 C ZN ZN . A ZN 1001 1_555 A OD2 ASP 145 A ASP 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc5 C ZN ZN . A ZN 1001 1_555 A OD2 ASP 262 A ASP 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc6 C ZN ZN . A ZN 1001 1_555 I O HOH . A HOH 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.924 ? metalc ? metalc7 D MG MG . A MG 1002 1_555 I O HOH . A HOH 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc8 D MG MG . A MG 1002 1_555 I O HOH . A HOH 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc9 D MG MG . A MG 1002 1_555 I O HOH . A HOH 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc10 D MG MG . A MG 1002 1_555 A OD1 ASP 145 A ASP 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc11 D MG MG . A MG 1002 1_555 I O HOH . A HOH 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc12 D MG MG . A MG 1002 1_555 I O HOH . A HOH 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? covale ? covale3 B C THR 63 B THR 193 1_555 B N CME 64 B CME 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale4 B C CME 64 B CME 194 1_555 B N ILE 65 B ILE 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? metalc ? metalc13 F ZN ZN . B ZN 1001 1_555 J O HOH . B HOH 2008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc14 F ZN ZN . B ZN 1001 1_555 B OD2 ASP 262 B ASP 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc15 F ZN ZN . B ZN 1001 1_555 B OD2 ASP 145 B ASP 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc16 F ZN ZN . B ZN 1001 1_555 B NE2 HIS 108 B HIS 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc17 F ZN ZN . B ZN 1001 1_555 B NE2 HIS 144 B HIS 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc18 F ZN ZN . B ZN 1001 1_555 J O HOH . B HOH 2007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc19 G MG MG . B MG 1002 1_555 J O HOH . B HOH 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc20 G MG MG . B MG 1002 1_555 J O HOH . B HOH 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc21 G MG MG . B MG 1002 1_555 J O HOH . B HOH 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc22 G MG MG . B MG 1002 1_555 J O HOH . B HOH 2006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc23 G MG MG . B MG 1002 1_555 J O HOH . B HOH 2007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc24 G MG MG . B MG 1002 1_555 B OD1 ASP 145 B ASP 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? # _chem_comp.formula 'C20 H25 N O4' _chem_comp.formula_weight 343.417 _chem_comp.id CIO _chem_comp.mon_nstd_flag . _chem_comp.name CILOMILAST _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'CIS-4-CYANO-4-[3-(CYCLOPENTYLOXY)-4-METHOXYPHENYL]CYCLOHEXANECARBOXYLIC ACID' # _atom_sites.entry_id 1XLX _atom_sites.fract_transf_matrix[1][1] 0.011201 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010609 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009427 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 1001 1001 ZN ZN . D 3 MG A 1 1002 1002 MG MG . E 4 CIO A 1 101 101 CIO CIO . F 2 ZN B 1 1001 1001 ZN ZN . G 3 MG B 1 1002 1002 MG MG . H 4 CIO B 1 102 102 CIO CIO . I 5 HOH A 1 2 2 HOH HOH . I 5 HOH A 2 3 3 HOH HOH . I 5 HOH A 3 5 5 HOH HOH . I 5 HOH A 4 7 7 HOH HOH . I 5 HOH A 5 11 11 HOH HOH . I 5 HOH A 6 13 13 HOH HOH . I 5 HOH A 7 14 14 HOH HOH . I 5 HOH A 8 16 16 HOH HOH . I 5 HOH A 9 20 20 HOH HOH . I 5 HOH A 10 21 21 HOH HOH . I 5 HOH A 11 23 23 HOH HOH . I 5 HOH A 12 29 29 HOH HOH . I 5 HOH A 13 30 30 HOH HOH . I 5 HOH A 14 38 38 HOH HOH . I 5 HOH A 15 39 39 HOH HOH . I 5 HOH A 16 42 42 HOH HOH . I 5 HOH A 17 45 45 HOH HOH . I 5 HOH A 18 46 46 HOH HOH . I 5 HOH A 19 47 47 HOH HOH . I 5 HOH A 20 49 49 HOH HOH . I 5 HOH A 21 50 50 HOH HOH . I 5 HOH A 22 59 59 HOH HOH . I 5 HOH A 23 60 60 HOH HOH . I 5 HOH A 24 61 61 HOH HOH . I 5 HOH A 25 64 64 HOH HOH . I 5 HOH A 26 65 65 HOH HOH . I 5 HOH A 27 67 67 HOH HOH . I 5 HOH A 28 68 68 HOH HOH . I 5 HOH A 29 69 69 HOH HOH . I 5 HOH A 30 1003 1003 HOH HOH . I 5 HOH A 31 1004 1004 HOH HOH . I 5 HOH A 32 1005 1005 HOH HOH . I 5 HOH A 33 1006 1006 HOH HOH . I 5 HOH A 34 1007 1007 HOH HOH . I 5 HOH A 35 1008 1008 HOH HOH . J 5 HOH B 1 1 1 HOH HOH . J 5 HOH B 2 4 4 HOH HOH . J 5 HOH B 3 6 6 HOH HOH . J 5 HOH B 4 8 8 HOH HOH . J 5 HOH B 5 9 9 HOH HOH . J 5 HOH B 6 10 10 HOH HOH . J 5 HOH B 7 12 12 HOH HOH . J 5 HOH B 8 15 15 HOH HOH . J 5 HOH B 9 17 17 HOH HOH . J 5 HOH B 10 18 18 HOH HOH . J 5 HOH B 11 19 19 HOH HOH . J 5 HOH B 12 22 22 HOH HOH . J 5 HOH B 13 24 24 HOH HOH . J 5 HOH B 14 25 25 HOH HOH . J 5 HOH B 15 26 26 HOH HOH . J 5 HOH B 16 27 27 HOH HOH . J 5 HOH B 17 28 28 HOH HOH . J 5 HOH B 18 31 31 HOH HOH . J 5 HOH B 19 36 36 HOH HOH . J 5 HOH B 20 40 40 HOH HOH . J 5 HOH B 21 43 43 HOH HOH . J 5 HOH B 22 44 44 HOH HOH . J 5 HOH B 23 48 48 HOH HOH . J 5 HOH B 24 51 51 HOH HOH . J 5 HOH B 25 53 53 HOH HOH . J 5 HOH B 26 54 54 HOH HOH . J 5 HOH B 27 56 56 HOH HOH . J 5 HOH B 28 57 57 HOH HOH . J 5 HOH B 29 58 58 HOH HOH . J 5 HOH B 30 62 62 HOH HOH . J 5 HOH B 31 63 63 HOH HOH . J 5 HOH B 32 66 66 HOH HOH . J 5 HOH B 33 2003 2003 HOH HOH . J 5 HOH B 34 2004 2004 HOH HOH . J 5 HOH B 35 2005 2005 HOH HOH . J 5 HOH B 36 2006 2006 HOH HOH . J 5 HOH B 37 2007 2007 HOH HOH . J 5 HOH B 38 2008 2008 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O25 CIO . . . E 4 7.942 4.687 -6.589 1 51.47 ? O25 CIO 101 A 1 HETATM 2 C C23 CIO . . . E 4 7.586 3.494 -6.905 1 52.42 ? C23 CIO 101 A 1 HETATM 3 O O24 CIO . . . E 4 8.387 2.506 -6.939 1 49.7 ? O24 CIO 101 A 1 HETATM 4 C C4 CIO . . . E 4 6.132 3.287 -7.319 1 50.76 ? C4 CIO 101 A 1 HETATM 5 C C5 CIO . . . E 4 6.064 2.722 -8.722 1 48.88 ? C5 CIO 101 A 1 HETATM 6 C C6 CIO . . . E 4 4.635 2.744 -9.269 1 49.71 ? C6 CIO 101 A 1 HETATM 7 C C3 CIO . . . E 4 5.343 2.331 -6.446 1 50.16 ? C3 CIO 101 A 1 HETATM 8 C C2 CIO . . . E 4 3.89 2.31 -6.989 1 51.94 ? C2 CIO 101 A 1 HETATM 9 C C1 CIO . . . E 4 3.701 1.868 -8.448 1 49.35 ? C1 CIO 101 A 1 HETATM 10 C C21 CIO . . . E 4 4.112 0.482 -8.65 1 53.85 ? C21 CIO 101 A 1 HETATM 11 N N22 CIO . . . E 4 4.4 -0.619 -8.876 1 57.37 ? N22 CIO 101 A 1 HETATM 12 C C7 CIO . . . E 4 2.253 1.844 -8.966 1 48.58 ? C7 CIO 101 A 1 HETATM 13 C C8 CIO . . . E 4 1.14 2.19 -8.19 1 46.51 ? C8 CIO 101 A 1 HETATM 14 C C9 CIO . . . E 4 -0.155 2.125 -8.719 1 47.25 ? C9 CIO 101 A 1 HETATM 15 C C10 CIO . . . E 4 -0.4 1.708 -10.048 1 48.65 ? C10 CIO 101 A 1 HETATM 16 O O11 CIO . . . E 4 -1.684 1.625 -10.601 1 47.9 ? O11 CIO 101 A 1 HETATM 17 C C12 CIO . . . E 4 -2.866 1.865 -9.809 1 45.03 ? C12 CIO 101 A 1 HETATM 18 C C13 CIO . . . E 4 0.699 1.367 -10.825 1 47.48 ? C13 CIO 101 A 1 HETATM 19 C C20 CIO . . . E 4 2.001 1.422 -10.285 1 45.3 ? C20 CIO 101 A 1 HETATM 20 O O14 CIO . . . E 4 0.464 0.949 -12.102 1 46.85 ? O14 CIO 101 A 1 HETATM 21 C C15 CIO . . . E 4 1.613 0.844 -12.996 1 50.1 ? C15 CIO 101 A 1 HETATM 22 C C16 CIO . . . E 4 1.51 -0.434 -13.76 1 48.12 ? C16 CIO 101 A 1 HETATM 23 C C17 CIO . . . E 4 0.407 -0.124 -14.72 1 48.18 ? C17 CIO 101 A 1 HETATM 24 C C18 CIO . . . E 4 0.493 1.353 -14.975 1 47.69 ? C18 CIO 101 A 1 HETATM 25 C C19 CIO . . . E 4 1.612 1.869 -14.102 1 49.93 ? C19 CIO 101 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 25 #