data_1XMU # _model_server_result.job_id z_F8prSYUrjLZcy6htxUdA _model_server_result.datetime_utc '2024-11-14 09:10:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xmu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":101}' # _entry.id 1XMU # _exptl.entry_id 1XMU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 403.207 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(CYCLOPROPYLMETHOXY)-N-(3,5-DICHLOROPYRIDIN-4-YL)-4-(DIFLUOROMETHOXY)BENZAMIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1XMU _cell.length_a 89.316 _cell.length_b 94.1 _cell.length_c 108.026 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XMU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 63 A THR 193 1_555 A N CME 64 A CME 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale2 A C CME 64 A CME 194 1_555 A N ILE 65 A ILE 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale3 A C MET 301 A MET 431 1_555 A N CME 302 A CME 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale4 A C CME 302 A CME 432 1_555 A N ASP 303 A ASP 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? covale ? covale5 B C THR 63 B THR 193 1_555 B N CME 64 B CME 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale6 B C CME 64 B CME 194 1_555 B N ILE 65 B ILE 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale7 B C HIS 189 B HIS 319 1_555 B N CME 190 B CME 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale8 B C CME 190 B CME 320 1_555 B N ASP 191 B ASP 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? metalc ? metalc1 A NE2 HIS 108 A HIS 238 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc2 A NE2 HIS 144 A HIS 274 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc3 A OD1 ASP 145 A ASP 275 1_555 D MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc4 A OD2 ASP 145 A ASP 275 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc5 A OD2 ASP 262 A ASP 392 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc6 B NE2 HIS 108 B HIS 238 1_555 F ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc7 B NE2 HIS 144 B HIS 274 1_555 F ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc8 B OD1 ASP 145 B ASP 275 1_555 G MG MG . B MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc9 B OD2 ASP 145 B ASP 275 1_555 F ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc10 B OD2 ASP 262 B ASP 392 1_555 F ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc11 C ZN ZN . A ZN 1001 1_555 I O HOH . A HOH 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc12 C ZN ZN . A ZN 1001 1_555 I O HOH . A HOH 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc13 D MG MG . A MG 1002 1_555 I O HOH . A HOH 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc14 D MG MG . A MG 1002 1_555 I O HOH . A HOH 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc15 D MG MG . A MG 1002 1_555 I O HOH . A HOH 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc16 D MG MG . A MG 1002 1_555 I O HOH . A HOH 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc17 D MG MG . A MG 1002 1_555 I O HOH . A HOH 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc18 F ZN ZN . B ZN 1001 1_555 J O HOH . B HOH 2008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc19 F ZN ZN . B ZN 1001 1_555 J O HOH . B HOH 2009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc20 G MG MG . B MG 1002 1_555 J O HOH . B HOH 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc21 G MG MG . B MG 1002 1_555 J O HOH . B HOH 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc22 G MG MG . B MG 1002 1_555 J O HOH . B HOH 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc23 G MG MG . B MG 1002 1_555 J O HOH . B HOH 2008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? metalc ? metalc24 G MG MG . B MG 1002 1_555 J O HOH . B HOH 2006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? # _chem_comp.formula 'C17 H14 Cl2 F2 N2 O3' _chem_comp.formula_weight 403.207 _chem_comp.id ROF _chem_comp.mon_nstd_flag . _chem_comp.name 3-(CYCLOPROPYLMETHOXY)-N-(3,5-DICHLOROPYRIDIN-4-YL)-4-(DIFLUOROMETHOXY)BENZAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ROFLUMILAST # _atom_sites.entry_id 1XMU _atom_sites.fract_transf_matrix[1][1] 0.011196 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010627 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009257 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 1001 1001 ZN ZN . D 4 MG A 1 1002 1002 MG MG . E 5 ROF A 1 101 101 ROF ROF . F 3 ZN B 1 1001 1001 ZN ZN . G 4 MG B 1 1002 1002 MG MG . H 5 ROF B 1 102 102 ROF ROF . I 6 HOH A 1 1 1 HOH HOH . I 6 HOH A 2 4 4 HOH HOH . I 6 HOH A 3 5 5 HOH HOH . I 6 HOH A 4 8 8 HOH HOH . I 6 HOH A 5 11 11 HOH HOH . I 6 HOH A 6 12 12 HOH HOH . I 6 HOH A 7 13 13 HOH HOH . I 6 HOH A 8 14 14 HOH HOH . I 6 HOH A 9 15 15 HOH HOH . I 6 HOH A 10 16 16 HOH HOH . I 6 HOH A 11 17 17 HOH HOH . I 6 HOH A 12 20 20 HOH HOH . I 6 HOH A 13 22 22 HOH HOH . I 6 HOH A 14 25 25 HOH HOH . I 6 HOH A 15 26 26 HOH HOH . I 6 HOH A 16 28 28 HOH HOH . I 6 HOH A 17 29 29 HOH HOH . I 6 HOH A 18 32 32 HOH HOH . I 6 HOH A 19 33 33 HOH HOH . I 6 HOH A 20 38 38 HOH HOH . I 6 HOH A 21 42 42 HOH HOH . I 6 HOH A 22 50 50 HOH HOH . I 6 HOH A 23 54 54 HOH HOH . I 6 HOH A 24 55 55 HOH HOH . I 6 HOH A 25 57 57 HOH HOH . I 6 HOH A 26 59 59 HOH HOH . I 6 HOH A 27 60 60 HOH HOH . I 6 HOH A 28 61 61 HOH HOH . I 6 HOH A 29 1003 1003 HOH HOH . I 6 HOH A 30 1004 1004 HOH HOH . I 6 HOH A 31 1005 1005 HOH HOH . I 6 HOH A 32 1006 1006 HOH HOH . I 6 HOH A 33 1007 1007 HOH HOH . I 6 HOH A 34 1008 1008 HOH HOH . I 6 HOH A 35 1009 1009 HOH HOH . J 6 HOH B 1 2 2 HOH HOH . J 6 HOH B 2 3 3 HOH HOH . J 6 HOH B 3 6 6 HOH HOH . J 6 HOH B 4 7 7 HOH HOH . J 6 HOH B 5 9 9 HOH HOH . J 6 HOH B 6 10 10 HOH HOH . J 6 HOH B 7 18 18 HOH HOH . J 6 HOH B 8 19 19 HOH HOH . J 6 HOH B 9 21 21 HOH HOH . J 6 HOH B 10 23 23 HOH HOH . J 6 HOH B 11 24 24 HOH HOH . J 6 HOH B 12 27 27 HOH HOH . J 6 HOH B 13 30 30 HOH HOH . J 6 HOH B 14 31 31 HOH HOH . J 6 HOH B 15 34 34 HOH HOH . J 6 HOH B 16 35 35 HOH HOH . J 6 HOH B 17 36 36 HOH HOH . J 6 HOH B 18 37 37 HOH HOH . J 6 HOH B 19 39 39 HOH HOH . J 6 HOH B 20 40 40 HOH HOH . J 6 HOH B 21 41 41 HOH HOH . J 6 HOH B 22 43 43 HOH HOH . J 6 HOH B 23 44 44 HOH HOH . J 6 HOH B 24 45 45 HOH HOH . J 6 HOH B 25 46 46 HOH HOH . J 6 HOH B 26 47 47 HOH HOH . J 6 HOH B 27 48 48 HOH HOH . J 6 HOH B 28 49 49 HOH HOH . J 6 HOH B 29 51 51 HOH HOH . J 6 HOH B 30 52 52 HOH HOH . J 6 HOH B 31 53 53 HOH HOH . J 6 HOH B 32 56 56 HOH HOH . J 6 HOH B 33 58 58 HOH HOH . J 6 HOH B 34 62 62 HOH HOH . J 6 HOH B 35 63 63 HOH HOH . J 6 HOH B 36 64 64 HOH HOH . J 6 HOH B 37 2003 2003 HOH HOH . J 6 HOH B 38 2004 2004 HOH HOH . J 6 HOH B 39 2005 2005 HOH HOH . J 6 HOH B 40 2006 2006 HOH HOH . J 6 HOH B 41 2007 2007 HOH HOH . J 6 HOH B 42 2008 2008 HOH HOH . J 6 HOH B 43 2009 2009 HOH HOH . J 6 HOH B 44 2010 2010 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O24 ROF . . . E 5 4.428 0.365 41.885 1 42.38 ? O24 ROF 101 A 1 HETATM 2 C C23 ROF . . . E 5 2.391 -0.514 35.547 1 52.72 ? C23 ROF 101 A 1 HETATM 3 C C22 ROF . . . E 5 1.016 0.19 35.683 1 51.94 ? C22 ROF 101 A 1 HETATM 4 C C21 ROF . . . E 5 1.429 -0.894 36.628 1 51.54 ? C21 ROF 101 A 1 HETATM 5 C C8 ROF . . . E 5 3.52 0.762 42.587 1 44.96 ? C8 ROF 101 A 1 HETATM 6 C C9 ROF . . . E 5 2.123 0.712 42.001 1 45.02 ? C9 ROF 101 A 1 HETATM 7 C C10 ROF . . . E 5 0.983 1.052 42.743 1 45.41 ? C10 ROF 101 A 1 HETATM 8 C C11 ROF . . . E 5 -0.292 1 42.192 1 43.88 ? C11 ROF 101 A 1 HETATM 9 C C12 ROF . . . E 5 -0.475 0.598 40.868 1 46.76 ? C12 ROF 101 A 1 HETATM 10 O O15 ROF . . . E 5 -1.708 0.538 40.243 1 46.27 ? O15 ROF 101 A 1 HETATM 11 C C16 ROF . . . E 5 -2.962 0.727 40.887 1 42.33 ? C16 ROF 101 A 1 HETATM 12 F F18 ROF . . . E 5 -3.024 -0.15 41.938 1 41.75 ? F18 ROF 101 A 1 HETATM 13 F F17 ROF . . . E 5 -3.05 2.024 41.306 1 42.03 ? F17 ROF 101 A 1 HETATM 14 C C13 ROF . . . E 5 0.73 0.232 40.071 1 47.01 ? C13 ROF 101 A 1 HETATM 15 O O19 ROF . . . E 5 0.584 -0.142 38.753 1 47.16 ? O19 ROF 101 A 1 HETATM 16 C C20 ROF . . . E 5 1.479 -1.057 38.115 1 50.97 ? C20 ROF 101 A 1 HETATM 17 C C14 ROF . . . E 5 1.984 0.308 40.686 1 45.45 ? C14 ROF 101 A 1 HETATM 18 N N7 ROF . . . E 5 3.729 1.244 43.822 1 42.38 ? N7 ROF 101 A 1 HETATM 19 C C6 ROF . . . E 5 4.974 1.393 44.339 1 44.23 ? C6 ROF 101 A 1 HETATM 20 C C5 ROF . . . E 5 6.047 2.267 43.788 1 42.81 ? C5 ROF 101 A 1 HETATM 21 CL CL26 ROF . . . E 5 5.789 3.247 42.406 1 44.27 ? CL26 ROF 101 A 1 HETATM 22 C C4 ROF . . . E 5 7.28 2.321 44.427 1 43.58 ? C4 ROF 101 A 1 HETATM 23 N N3 ROF . . . E 5 7.527 1.606 45.545 1 43.75 ? N3 ROF 101 A 1 HETATM 24 C C2 ROF . . . E 5 6.624 0.791 46.117 1 44.64 ? C2 ROF 101 A 1 HETATM 25 C C1 ROF . . . E 5 5.354 0.645 45.571 1 45.15 ? C1 ROF 101 A 1 HETATM 26 CL CL25 ROF . . . E 5 4.239 -0.406 46.336 1 48.89 ? CL25 ROF 101 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 26 #