data_1XN1 # _model_server_result.job_id rvhn5MDQPXA8uMeMiyWfVg _model_server_result.datetime_utc '2024-12-26 13:00:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xn1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"PA","auth_seq_id":215}' # _entry.id 1XN1 # _exptl.entry_id 1XN1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 24 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1XN1 _cell.length_a 116.554 _cell.length_b 120.238 _cell.length_c 159.372 _cell.Z_PDB 40 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XN1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 K N N ? 2 L N N ? 2 O N N ? 2 P N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 X N N ? 2 Y N N ? 2 DA N N ? 2 EA N N ? 2 FA N N ? 2 IA N N ? 2 JA N N ? 2 LA N N ? 2 MA N N ? 2 PA N N ? 2 QA N N ? 2 RA N N ? 2 UA N N ? 2 VA N N ? 2 ZA N N ? 2 AB N N ? 2 BB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD2 ASP 50 B ASP 52 1_555 S NA NA . B NA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.927 ? metalc ? metalc2 F OE2 GLU 56 F GLU 58 1_555 KA NA NA . F NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.179 ? metalc ? metalc3 OA NA NA . G NA 304 1_555 H OE2 GLU 56 H GLU 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.913 ? metalc ? metalc4 J OG SER 111 J SER 113 1_555 DB NA NA . J NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.119 ? metalc ? metalc5 J O VAL 113 J VAL 115 1_555 DB NA NA . J NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.12 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 1XN1 _atom_sites.fract_transf_matrix[1][1] 0.00858 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008317 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006275 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 2 PO4 A 1 201 1 PO4 PO4 . L 2 PO4 A 1 221 21 PO4 PO4 . M 3 NA A 1 300 300 NA NA . N 3 NA A 1 301 301 NA NA . O 2 PO4 B 1 203 3 PO4 PO4 . P 2 PO4 B 1 204 4 PO4 PO4 . Q 4 SO4 B 1 205 101 SO4 SO4 . R 4 SO4 B 1 206 102 SO4 SO4 . S 3 NA B 1 306 306 NA NA . T 2 PO4 C 1 205 5 PO4 PO4 . U 2 PO4 C 1 206 6 PO4 PO4 . V 2 PO4 C 1 208 8 PO4 PO4 . W 4 SO4 C 1 209 103 SO4 SO4 . X 2 PO4 D 1 207 7 PO4 PO4 . Y 2 PO4 D 1 210 10 PO4 PO4 . Z 4 SO4 D 1 211 104 SO4 SO4 . AA 4 SO4 D 1 212 105 SO4 SO4 . BA 4 SO4 D 1 213 111 SO4 SO4 . CA 3 NA D 1 302 302 NA NA . DA 2 PO4 E 1 202 2 PO4 PO4 . EA 2 PO4 E 1 209 9 PO4 PO4 . FA 2 PO4 E 1 222 22 PO4 PO4 . GA 4 SO4 E 1 223 106 SO4 SO4 . HA 4 SO4 E 1 224 107 SO4 SO4 . IA 2 PO4 F 1 211 11 PO4 PO4 . JA 2 PO4 F 1 212 12 PO4 PO4 . KA 3 NA F 1 303 303 NA NA . LA 2 PO4 G 1 213 13 PO4 PO4 . MA 2 PO4 G 1 214 14 PO4 PO4 . NA 4 SO4 G 1 215 112 SO4 SO4 . OA 3 NA G 1 304 304 NA NA . PA 2 PO4 H 1 215 15 PO4 PO4 . QA 2 PO4 H 1 216 16 PO4 PO4 . RA 2 PO4 H 1 223 23 PO4 PO4 . SA 4 SO4 H 1 224 108 SO4 SO4 . TA 4 SO4 H 1 225 114 SO4 SO4 . UA 2 PO4 I 1 217 17 PO4 PO4 . VA 2 PO4 I 1 218 18 PO4 PO4 . WA 4 SO4 I 1 219 109 SO4 SO4 . XA 4 SO4 I 1 220 113 SO4 SO4 . YA 4 SO4 I 1 221 115 SO4 SO4 . ZA 2 PO4 J 1 219 19 PO4 PO4 . AB 2 PO4 J 1 220 20 PO4 PO4 . BB 2 PO4 J 1 224 24 PO4 PO4 . CB 4 SO4 J 1 225 110 SO4 SO4 . DB 3 NA J 1 305 305 NA NA . EB 5 HOH A 1 302 7 HOH HOH . EB 5 HOH A 2 303 8 HOH HOH . EB 5 HOH A 3 304 9 HOH HOH . EB 5 HOH A 4 305 10 HOH HOH . FB 5 HOH C 1 210 1 HOH HOH . FB 5 HOH C 2 211 2 HOH HOH . FB 5 HOH C 3 212 11 HOH HOH . GB 5 HOH D 1 303 3 HOH HOH . GB 5 HOH D 2 304 4 HOH HOH . GB 5 HOH D 3 305 12 HOH HOH . HB 5 HOH G 1 305 13 HOH HOH . IB 5 HOH H 1 226 5 HOH HOH . JB 5 HOH I 1 222 6 HOH HOH . JB 5 HOH I 2 223 14 HOH HOH . KB 5 HOH J 1 306 15 HOH HOH . KB 5 HOH J 2 307 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . PA 2 77.508 107.519 141.734 0.75 31.65 ? P PO4 215 H 1 HETATM 2 O O1 PO4 . . . PA 2 76.349 106.639 141.411 0.75 28.28 ? O1 PO4 215 H 1 HETATM 3 O O2 PO4 . . . PA 2 77.012 108.871 142.115 0.75 29.83 ? O2 PO4 215 H 1 HETATM 4 O O3 PO4 . . . PA 2 78.391 107.629 140.546 0.75 30.95 ? O3 PO4 215 H 1 HETATM 5 O O4 PO4 . . . PA 2 78.281 106.938 142.863 0.75 29.04 ? O4 PO4 215 H 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #