data_1XN1
#
_model_server_result.job_id            Ng-mPh-JG9nDsN1D8EEBVA 
_model_server_result.datetime_utc      '2024-10-14 07:26:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1xn1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"VA","auth_seq_id":218}' 
#
_entry.id    1XN1 
#
_exptl.entry_id    1XN1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    24 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1XN1 
_cell.length_a            116.554 
_cell.length_b            120.238 
_cell.length_c            159.372 
_cell.Z_PDB               40 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1XN1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    decameric 
_pdbx_struct_assembly.oligomeric_count      10 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 K N N 
? 2 L N N 
? 2 O N N 
? 2 P N N 
? 2 T N N 
? 2 U N N 
? 2 V N N 
? 2 X N N 
? 2 Y N N 
? 2 DA N N 
? 2 EA N N 
? 2 FA N N 
? 2 IA N N 
? 2 JA N N 
? 2 LA N N 
? 2 MA N N 
? 2 PA N N 
? 2 QA N N 
? 2 RA N N 
? 2 UA N N 
? 2 VA N N 
? 2 ZA N N 
? 2 AB N N 
? 2 BB N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B OD2 ASP 50 B ASP 52 1_555 S NA NA . B NA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.927 ? 
metalc ? metalc2 F OE2 GLU 56 F GLU 58 1_555 KA NA NA . F NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.179 ? 
metalc ? metalc3 OA NA NA . G NA 304 1_555 H OE2 GLU 56 H GLU 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.913 ? 
metalc ? metalc4 J OG SER 111 J SER 113 1_555 DB NA NA . J NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.119 ? 
metalc ? metalc5 J O VAL 113 J VAL 115 1_555 DB NA NA . J NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.12 ? 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 260 n n 
P O2 PO4 sing 261 n n 
P O3 PO4 sing 262 n n 
P O4 PO4 sing 263 n n 
#
_atom_sites.entry_id                     1XN1 
_atom_sites.fract_transf_matrix[1][1]    0.00858 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008317 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006275 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
K 2 PO4 A 1 201 1 PO4 PO4 . 
L 2 PO4 A 1 221 21 PO4 PO4 . 
M 3 NA A 1 300 300 NA NA . 
N 3 NA A 1 301 301 NA NA . 
O 2 PO4 B 1 203 3 PO4 PO4 . 
P 2 PO4 B 1 204 4 PO4 PO4 . 
Q 4 SO4 B 1 205 101 SO4 SO4 . 
R 4 SO4 B 1 206 102 SO4 SO4 . 
S 3 NA B 1 306 306 NA NA . 
T 2 PO4 C 1 205 5 PO4 PO4 . 
U 2 PO4 C 1 206 6 PO4 PO4 . 
V 2 PO4 C 1 208 8 PO4 PO4 . 
W 4 SO4 C 1 209 103 SO4 SO4 . 
X 2 PO4 D 1 207 7 PO4 PO4 . 
Y 2 PO4 D 1 210 10 PO4 PO4 . 
Z 4 SO4 D 1 211 104 SO4 SO4 . 
AA 4 SO4 D 1 212 105 SO4 SO4 . 
BA 4 SO4 D 1 213 111 SO4 SO4 . 
CA 3 NA D 1 302 302 NA NA . 
DA 2 PO4 E 1 202 2 PO4 PO4 . 
EA 2 PO4 E 1 209 9 PO4 PO4 . 
FA 2 PO4 E 1 222 22 PO4 PO4 . 
GA 4 SO4 E 1 223 106 SO4 SO4 . 
HA 4 SO4 E 1 224 107 SO4 SO4 . 
IA 2 PO4 F 1 211 11 PO4 PO4 . 
JA 2 PO4 F 1 212 12 PO4 PO4 . 
KA 3 NA F 1 303 303 NA NA . 
LA 2 PO4 G 1 213 13 PO4 PO4 . 
MA 2 PO4 G 1 214 14 PO4 PO4 . 
NA 4 SO4 G 1 215 112 SO4 SO4 . 
OA 3 NA G 1 304 304 NA NA . 
PA 2 PO4 H 1 215 15 PO4 PO4 . 
QA 2 PO4 H 1 216 16 PO4 PO4 . 
RA 2 PO4 H 1 223 23 PO4 PO4 . 
SA 4 SO4 H 1 224 108 SO4 SO4 . 
TA 4 SO4 H 1 225 114 SO4 SO4 . 
UA 2 PO4 I 1 217 17 PO4 PO4 . 
VA 2 PO4 I 1 218 18 PO4 PO4 . 
WA 4 SO4 I 1 219 109 SO4 SO4 . 
XA 4 SO4 I 1 220 113 SO4 SO4 . 
YA 4 SO4 I 1 221 115 SO4 SO4 . 
ZA 2 PO4 J 1 219 19 PO4 PO4 . 
AB 2 PO4 J 1 220 20 PO4 PO4 . 
BB 2 PO4 J 1 224 24 PO4 PO4 . 
CB 4 SO4 J 1 225 110 SO4 SO4 . 
DB 3 NA J 1 305 305 NA NA . 
EB 5 HOH A 1 302 7 HOH HOH . 
EB 5 HOH A 2 303 8 HOH HOH . 
EB 5 HOH A 3 304 9 HOH HOH . 
EB 5 HOH A 4 305 10 HOH HOH . 
FB 5 HOH C 1 210 1 HOH HOH . 
FB 5 HOH C 2 211 2 HOH HOH . 
FB 5 HOH C 3 212 11 HOH HOH . 
GB 5 HOH D 1 303 3 HOH HOH . 
GB 5 HOH D 2 304 4 HOH HOH . 
GB 5 HOH D 3 305 12 HOH HOH . 
HB 5 HOH G 1 305 13 HOH HOH . 
IB 5 HOH H 1 226 5 HOH HOH . 
JB 5 HOH I 1 222 6 HOH HOH . 
JB 5 HOH I 2 223 14 HOH HOH . 
KB 5 HOH J 1 306 15 HOH HOH . 
KB 5 HOH J 2 307 16 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . VA 2 67.525 119.463 129.757 0.5 18.52 ? P PO4 218 I 1 
HETATM 2 O O1 PO4 . . . VA 2 68.527 120.303 130.466 0.5 18.56 ? O1 PO4 218 I 1 
HETATM 3 O O2 PO4 . . . VA 2 67.201 120.088 128.442 0.5 16.42 ? O2 PO4 218 I 1 
HETATM 4 O O3 PO4 . . . VA 2 66.293 119.361 130.581 0.5 17.29 ? O3 PO4 218 I 1 
HETATM 5 O O4 PO4 . . . VA 2 68.082 118.1 129.538 0.5 16.43 ? O4 PO4 218 I 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    38 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           5 
#