data_1XO2 # _model_server_result.job_id BLSJrB_QIzkyKlMCJYMW8Q _model_server_result.datetime_utc '2024-12-04 06:00:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xo2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":309}' # _entry.id 1XO2 # _exptl.entry_id 1XO2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 286.236 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "3,7,3',4'-TETRAHYDROXYFLAVONE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1XO2 _cell.length_a 66.162 _cell.length_b 66.162 _cell.length_c 448.596 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XO2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H10 O6' _chem_comp.formula_weight 286.236 _chem_comp.id FSE _chem_comp.mon_nstd_flag . _chem_comp.name "3,7,3',4'-TETRAHYDROXYFLAVONE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Fisetin;2-(3,4-DIHYDROXYPHENYL)-3,7-DIHYDROXY-4H-CHROMEN-4-ONE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 C5 FSE doub 83 n y C6 C7 FSE sing 84 n y C6 H6 FSE sing 85 n n C5 C10 FSE sing 86 n y C5 H5 FSE sing 87 n n C10 C9 FSE doub 88 n y C10 C4 FSE sing 89 n n C9 C8 FSE sing 90 n y C9 O1 FSE sing 91 n n C8 C7 FSE doub 92 n y C8 H8 FSE sing 93 n n C7 O7 FSE sing 94 n n C4 C3 FSE sing 95 n n C4 O4 FSE doub 96 n n C3 C2 FSE doub 97 n n C3 O3 FSE sing 98 n n C2 C1' FSE sing 99 n n C2 O1 FSE sing 100 n n C1' C6' FSE doub 101 n y C1' C2' FSE sing 102 n y C6' C5' FSE sing 103 n y C6' H6' FSE sing 104 n n C5' C4' FSE doub 105 n y C5' H5' FSE sing 106 n n C4' C3' FSE sing 107 n y C4' O4' FSE sing 108 n n C3' C2' FSE doub 109 n y C3' O3' FSE sing 110 n n C2' H2' FSE sing 111 n n O3' H3' FSE sing 112 n n O4' H4' FSE sing 113 n n O3 HO3 FSE sing 114 n n O7 HO7 FSE sing 115 n n # _atom_sites.entry_id 1XO2 _atom_sites.fract_transf_matrix[1][1] 0.015114 _atom_sites.fract_transf_matrix[1][2] 0.008726 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017453 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002229 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id FSE _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 309 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id FSE _pdbx_nonpoly_scheme.auth_mon_id FIS _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C6 FSE . . . C 3 -3.343 37.309 140.471 1 24.88 ? C6 FSE 309 B 1 HETATM 2 C C5 FSE . . . C 3 -2.248 36.927 141.307 1 26.13 ? C5 FSE 309 B 1 HETATM 3 C C10 FSE . . . C 3 -0.813 36.932 140.824 1 26.57 ? C10 FSE 309 B 1 HETATM 4 C C9 FSE . . . C 3 -0.673 37.392 139.424 1 26.26 ? C9 FSE 309 B 1 HETATM 5 C C8 FSE . . . C 3 -1.794 37.785 138.582 1 25.53 ? C8 FSE 309 B 1 HETATM 6 C C7 FSE . . . C 3 -3.142 37.712 139.104 1 27.28 ? C7 FSE 309 B 1 HETATM 7 C C4 FSE . . . C 3 0.386 36.505 141.592 1 26.54 ? C4 FSE 309 B 1 HETATM 8 C C3 FSE . . . C 3 1.743 36.553 140.898 1 25.27 ? C3 FSE 309 B 1 HETATM 9 C C2 FSE . . . C 3 1.871 37.008 139.544 1 24.7 ? C2 FSE 309 B 1 HETATM 10 C C1' FSE . . . C 3 3.027 37.188 138.661 1 25.51 ? C1' FSE 309 B 1 HETATM 11 C C6' FSE . . . C 3 4.363 37.066 139.13 1 25.94 ? C6' FSE 309 B 1 HETATM 12 C C5' FSE . . . C 3 5.456 37.255 138.26 1 27.92 ? C5' FSE 309 B 1 HETATM 13 C C4' FSE . . . C 3 5.232 37.567 136.896 1 27.4 ? C4' FSE 309 B 1 HETATM 14 C C3' FSE . . . C 3 3.934 37.68 136.364 1 26.3 ? C3' FSE 309 B 1 HETATM 15 C C2' FSE . . . C 3 2.829 37.5 137.209 1 25.71 ? C2' FSE 309 B 1 HETATM 16 O O1 FSE . . . C 3 0.684 37.416 138.867 1 27.13 ? O1 FSE 309 B 1 HETATM 17 O O4 FSE . . . C 3 0.35 36.089 142.801 1 29.3 ? O4 FSE 309 B 1 HETATM 18 O O3' FSE . . . C 3 3.85 38.004 134.995 1 23.12 ? O3' FSE 309 B 1 HETATM 19 O O4' FSE . . . C 3 6.31 37.736 136.116 1 29.07 ? O4' FSE 309 B 1 HETATM 20 O O3 FSE . . . C 3 2.892 36.143 141.613 1 27.38 ? O3 FSE 309 B 1 HETATM 21 O O7 FSE . . . C 3 -4.22 38.024 138.26 1 30.57 ? O7 FSE 309 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 21 #