data_1XP0 # _model_server_result.job_id DGPByCHrSt3iAD-Sg8eReQ _model_server_result.datetime_utc '2024-11-14 08:47:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xp0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2}' # _entry.id 1XP0 # _exptl.entry_id 1XP0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1XP0 _cell.length_a 89.662 _cell.length_b 89.662 _cell.length_c 222.002 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XP0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B ZN ZN . A ZN 1 1_555 A NE2 HIS 105 A HIS 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc2 B ZN ZN . A ZN 1 1_555 A NE2 HIS 141 A HIS 653 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc3 B ZN ZN . A ZN 1 1_555 A OD2 ASP 142 A ASP 654 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc4 B ZN ZN . A ZN 1 1_555 A OD1 ASP 253 A ASP 764 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc5 B ZN ZN . A ZN 1 1_555 E O HOH . A HOH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc6 B ZN ZN . A ZN 1 1_555 E O HOH . A HOH 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc7 C MG MG . A MG 2 1_555 A OD1 ASP 142 A ASP 654 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc8 C MG MG . A MG 2 1_555 E O HOH . A HOH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc9 C MG MG . A MG 2 1_555 E O HOH . A HOH 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc10 C MG MG . A MG 2 1_555 E O HOH . A HOH 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc11 C MG MG . A MG 2 1_555 E O HOH . A HOH 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc12 C MG MG . A MG 2 1_555 E O HOH . A HOH 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1XP0 _atom_sites.fract_transf_matrix[1][1] 0.011153 _atom_sites.fract_transf_matrix[1][2] 0.006439 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012878 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004504 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1 1 ZN ZN . C 3 MG A 1 2 2 MG MG . D 4 VDN A 1 201 1 VDN LIG . E 5 HOH A 1 1001 1001 HOH HOH . E 5 HOH A 2 1002 1002 HOH HOH . E 5 HOH A 3 1003 1003 HOH HOH . E 5 HOH A 4 1004 1004 HOH HOH . E 5 HOH A 5 1005 1005 HOH HOH . E 5 HOH A 6 1006 1006 HOH HOH . E 5 HOH A 7 1007 1007 HOH HOH . E 5 HOH A 8 1008 1 HOH HOH . E 5 HOH A 9 1009 2 HOH HOH . E 5 HOH A 10 1010 3 HOH HOH . E 5 HOH A 11 1011 4 HOH HOH . E 5 HOH A 12 1012 5 HOH HOH . E 5 HOH A 13 1013 6 HOH HOH . E 5 HOH A 14 1014 7 HOH HOH . E 5 HOH A 15 1015 8 HOH HOH . E 5 HOH A 16 1016 9 HOH HOH . E 5 HOH A 17 1017 10 HOH HOH . E 5 HOH A 18 1018 11 HOH HOH . E 5 HOH A 19 1019 12 HOH HOH . E 5 HOH A 20 1020 13 HOH HOH . E 5 HOH A 21 1021 14 HOH HOH . E 5 HOH A 22 1022 15 HOH HOH . E 5 HOH A 23 1023 16 HOH HOH . E 5 HOH A 24 1024 17 HOH HOH . E 5 HOH A 25 1025 19 HOH HOH . E 5 HOH A 26 1026 20 HOH HOH . E 5 HOH A 27 1027 21 HOH HOH . E 5 HOH A 28 1028 22 HOH HOH . E 5 HOH A 29 1029 23 HOH HOH . E 5 HOH A 30 1030 24 HOH HOH . E 5 HOH A 31 1031 25 HOH HOH . E 5 HOH A 32 1032 26 HOH HOH . E 5 HOH A 33 1033 27 HOH HOH . E 5 HOH A 34 1034 28 HOH HOH . E 5 HOH A 35 1035 29 HOH HOH . E 5 HOH A 36 1036 30 HOH HOH . E 5 HOH A 37 1037 31 HOH HOH . E 5 HOH A 38 1038 32 HOH HOH . E 5 HOH A 39 1039 33 HOH HOH . E 5 HOH A 40 1040 34 HOH HOH . E 5 HOH A 41 1041 35 HOH HOH . E 5 HOH A 42 1042 36 HOH HOH . E 5 HOH A 43 1043 37 HOH HOH . E 5 HOH A 44 1044 38 HOH HOH . E 5 HOH A 45 1045 39 HOH HOH . E 5 HOH A 46 1046 40 HOH HOH . E 5 HOH A 47 1047 41 HOH HOH . E 5 HOH A 48 1048 42 HOH HOH . E 5 HOH A 49 1049 43 HOH HOH . E 5 HOH A 50 1050 44 HOH HOH . E 5 HOH A 51 1051 45 HOH HOH . E 5 HOH A 52 1052 46 HOH HOH . E 5 HOH A 53 1053 47 HOH HOH . E 5 HOH A 54 1054 48 HOH HOH . E 5 HOH A 55 1055 49 HOH HOH . E 5 HOH A 56 1056 50 HOH HOH . E 5 HOH A 57 1057 51 HOH HOH . E 5 HOH A 58 1058 52 HOH HOH . E 5 HOH A 59 1059 53 HOH HOH . E 5 HOH A 60 1060 54 HOH HOH . E 5 HOH A 61 1061 55 HOH HOH . E 5 HOH A 62 1062 56 HOH HOH . E 5 HOH A 63 1063 57 HOH HOH . E 5 HOH A 64 1064 58 HOH HOH . E 5 HOH A 65 1065 59 HOH HOH . E 5 HOH A 66 1066 60 HOH HOH . E 5 HOH A 67 1067 61 HOH HOH . E 5 HOH A 68 1068 62 HOH HOH . E 5 HOH A 69 1069 63 HOH HOH . E 5 HOH A 70 1070 64 HOH HOH . E 5 HOH A 71 1071 65 HOH HOH . E 5 HOH A 72 1072 66 HOH HOH . E 5 HOH A 73 1073 67 HOH HOH . E 5 HOH A 74 1074 68 HOH HOH . E 5 HOH A 75 1075 69 HOH HOH . E 5 HOH A 76 1076 70 HOH HOH . E 5 HOH A 77 1077 71 HOH HOH . E 5 HOH A 78 1078 72 HOH HOH . E 5 HOH A 79 1079 73 HOH HOH . E 5 HOH A 80 1080 74 HOH HOH . E 5 HOH A 81 1081 75 HOH HOH . E 5 HOH A 82 1082 76 HOH HOH . E 5 HOH A 83 1083 77 HOH HOH . E 5 HOH A 84 1084 78 HOH HOH . E 5 HOH A 85 1085 79 HOH HOH . E 5 HOH A 86 1086 80 HOH HOH . E 5 HOH A 87 1087 81 HOH HOH . E 5 HOH A 88 1088 82 HOH HOH . E 5 HOH A 89 1089 83 HOH HOH . E 5 HOH A 90 1090 84 HOH HOH . E 5 HOH A 91 1091 85 HOH HOH . E 5 HOH A 92 1092 86 HOH HOH . E 5 HOH A 93 1093 87 HOH HOH . E 5 HOH A 94 1094 88 HOH HOH . E 5 HOH A 95 1095 89 HOH HOH . E 5 HOH A 96 1096 90 HOH HOH . E 5 HOH A 97 1097 91 HOH HOH . E 5 HOH A 98 1098 92 HOH HOH . E 5 HOH A 99 1099 93 HOH HOH . E 5 HOH A 100 1100 94 HOH HOH . E 5 HOH A 101 1101 95 HOH HOH . E 5 HOH A 102 1102 96 HOH HOH . E 5 HOH A 103 1103 98 HOH HOH . E 5 HOH A 104 1104 99 HOH HOH . E 5 HOH A 105 1105 100 HOH HOH . E 5 HOH A 106 1106 101 HOH HOH . E 5 HOH A 107 1107 102 HOH HOH . E 5 HOH A 108 1108 103 HOH HOH . E 5 HOH A 109 1109 104 HOH HOH . E 5 HOH A 110 1110 105 HOH HOH . E 5 HOH A 111 1111 106 HOH HOH . E 5 HOH A 112 1112 107 HOH HOH . E 5 HOH A 113 1113 108 HOH HOH . E 5 HOH A 114 1114 109 HOH HOH . E 5 HOH A 115 1115 110 HOH HOH . E 5 HOH A 116 1116 111 HOH HOH . E 5 HOH A 117 1117 112 HOH HOH . E 5 HOH A 118 1118 113 HOH HOH . E 5 HOH A 119 1119 114 HOH HOH . E 5 HOH A 120 1120 115 HOH HOH . E 5 HOH A 121 1121 116 HOH HOH . E 5 HOH A 122 1122 117 HOH HOH . E 5 HOH A 123 1123 118 HOH HOH . E 5 HOH A 124 1124 119 HOH HOH . E 5 HOH A 125 1125 120 HOH HOH . E 5 HOH A 126 1126 121 HOH HOH . E 5 HOH A 127 1127 122 HOH HOH . E 5 HOH A 128 1128 123 HOH HOH . E 5 HOH A 129 1129 124 HOH HOH . E 5 HOH A 130 1130 125 HOH HOH . E 5 HOH A 131 1131 126 HOH HOH . E 5 HOH A 132 1132 129 HOH HOH . E 5 HOH A 133 1133 130 HOH HOH . E 5 HOH A 134 1134 131 HOH HOH . E 5 HOH A 135 1135 132 HOH HOH . E 5 HOH A 136 1136 133 HOH HOH . E 5 HOH A 137 1137 134 HOH HOH . E 5 HOH A 138 1138 135 HOH HOH . E 5 HOH A 139 1139 136 HOH HOH . E 5 HOH A 140 1140 137 HOH HOH . E 5 HOH A 141 1141 138 HOH HOH . E 5 HOH A 142 1142 139 HOH HOH . E 5 HOH A 143 1143 140 HOH HOH . E 5 HOH A 144 1144 142 HOH HOH . E 5 HOH A 145 1145 143 HOH HOH . E 5 HOH A 146 1146 144 HOH HOH . E 5 HOH A 147 1147 145 HOH HOH . E 5 HOH A 148 1148 146 HOH HOH . E 5 HOH A 149 1149 147 HOH HOH . E 5 HOH A 150 1150 148 HOH HOH . E 5 HOH A 151 1151 149 HOH HOH . E 5 HOH A 152 1152 150 HOH HOH . E 5 HOH A 153 1153 151 HOH HOH . E 5 HOH A 154 1154 152 HOH HOH . E 5 HOH A 155 1155 153 HOH HOH . E 5 HOH A 156 1156 154 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -23.387 _atom_site.Cartn_y 33.184 _atom_site.Cartn_z 73.01 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.43 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 2 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #