data_1XP1 # _model_server_result.job_id 5nPcbl-lW0cWF5pT9FrJbg _model_server_result.datetime_utc '2024-12-22 10:12:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xp1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":600}' # _entry.id 1XP1 # _exptl.entry_id 1XP1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 477.615 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S,3R)-2-(4-{2-[(3R,4R)-3,4-DIMETHYLPYRROLIDIN-1-YL]ETHOXY}PHENYL)-3-(4-HYDROXYPHENYL)-2,3-DIHYDRO-1,4-BENZOXATHIIN-6- OL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1XP1 _cell.length_a 58.62 _cell.length_b 58.62 _cell.length_c 276.79 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XP1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 29.31 50.766409 46.131667 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C28 H31 N O4 S' _chem_comp.formula_weight 477.615 _chem_comp.id AIH _chem_comp.mon_nstd_flag . _chem_comp.name '(2S,3R)-2-(4-{2-[(3R,4R)-3,4-DIMETHYLPYRROLIDIN-1-YL]ETHOXY}PHENYL)-3-(4-HYDROXYPHENYL)-2,3-DIHYDRO-1,4-BENZOXATHIIN-6- OL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'COMPOUND 15' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 AIH sing 1 n n C1 S11 AIH sing 2 n n C1 C12 AIH sing 3 n n C1 H1 AIH sing 4 n n C2 O3 AIH sing 5 n n C2 C19 AIH sing 6 n n C2 H2 AIH sing 7 n n O3 C4 AIH sing 8 n n C4 C5 AIH doub 9 n y C4 C10 AIH sing 10 n y C5 C6 AIH sing 11 n y C5 H5 AIH sing 12 n n C6 C7 AIH doub 13 n y C6 H6 AIH sing 14 n n C7 O8 AIH sing 15 n n C7 C9 AIH sing 16 n y O8 HO8 AIH sing 17 n n C9 C10 AIH doub 18 n y C9 H9 AIH sing 19 n n C10 S11 AIH sing 20 n n C12 C13 AIH doub 21 n y C12 C18 AIH sing 22 n y C13 C14 AIH sing 23 n y C13 H13 AIH sing 24 n n C14 C15 AIH doub 25 n y C14 H14 AIH sing 26 n n C15 O16 AIH sing 27 n n C15 C17 AIH sing 28 n y O16 H16 AIH sing 29 n n C17 C18 AIH doub 30 n y C17 H17 AIH sing 31 n n C18 H18 AIH sing 32 n n C19 C20 AIH doub 33 n y C19 C24 AIH sing 34 n y C20 C21 AIH sing 35 n y C20 H20 AIH sing 36 n n C21 C22 AIH doub 37 n y C21 H21 AIH sing 38 n n C22 C23 AIH sing 39 n y C22 O25 AIH sing 40 n n C23 C24 AIH doub 41 n y C23 H23 AIH sing 42 n n C24 H24 AIH sing 43 n n O25 C26 AIH sing 44 n n C26 C27 AIH sing 45 n n C26 H261 AIH sing 46 n n C26 H262 AIH sing 47 n n C27 N28 AIH sing 48 n n C27 H271 AIH sing 49 n n C27 H272 AIH sing 50 n n N28 C29 AIH sing 51 n n N28 C34 AIH sing 52 n n C29 C30 AIH sing 53 n n C29 H291 AIH sing 54 n n C29 H292 AIH sing 55 n n C30 C31 AIH sing 56 n n C30 C32 AIH sing 57 n n C30 H30 AIH sing 58 n n C31 H311 AIH sing 59 n n C31 H312 AIH sing 60 n n C31 H313 AIH sing 61 n n C32 C33 AIH sing 62 n n C32 C34 AIH sing 63 n n C32 H32 AIH sing 64 n n C33 H331 AIH sing 65 n n C33 H332 AIH sing 66 n n C33 H333 AIH sing 67 n n C34 H341 AIH sing 68 n n C34 H342 AIH sing 69 n n # _atom_sites.entry_id 1XP1 _atom_sites.fract_transf_matrix[1][1] 0.017059 _atom_sites.fract_transf_matrix[1][2] 0.009849 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019698 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003613 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AIH A 1 600 600 AIH INH . C 3 HOH A 1 1001 1001 HOH HOH . C 3 HOH A 2 1002 1002 HOH HOH . C 3 HOH A 3 1003 1003 HOH HOH . C 3 HOH A 4 1004 1004 HOH HOH . C 3 HOH A 5 1005 1005 HOH HOH . C 3 HOH A 6 1006 1006 HOH HOH . C 3 HOH A 7 1007 1007 HOH HOH . C 3 HOH A 8 1008 1008 HOH HOH . C 3 HOH A 9 1009 1009 HOH HOH . C 3 HOH A 10 1010 1010 HOH HOH . C 3 HOH A 11 1011 1011 HOH HOH . C 3 HOH A 12 1012 1012 HOH HOH . C 3 HOH A 13 1013 1013 HOH HOH . C 3 HOH A 14 1014 1014 HOH HOH . C 3 HOH A 15 1015 1015 HOH HOH . C 3 HOH A 16 1016 1016 HOH HOH . C 3 HOH A 17 1017 1017 HOH HOH . C 3 HOH A 18 1018 1018 HOH HOH . C 3 HOH A 19 1019 1019 HOH HOH . C 3 HOH A 20 1020 1020 HOH HOH . C 3 HOH A 21 1021 1021 HOH HOH . C 3 HOH A 22 1022 1022 HOH HOH . C 3 HOH A 23 1023 1023 HOH HOH . C 3 HOH A 24 1024 1024 HOH HOH . C 3 HOH A 25 1025 1025 HOH HOH . C 3 HOH A 26 1026 1026 HOH HOH . C 3 HOH A 27 1027 1027 HOH HOH . C 3 HOH A 28 1028 1028 HOH HOH . C 3 HOH A 29 1029 1029 HOH HOH . C 3 HOH A 30 1030 1030 HOH HOH . C 3 HOH A 31 1031 1031 HOH HOH . C 3 HOH A 32 1032 1032 HOH HOH . C 3 HOH A 33 1033 1033 HOH HOH . C 3 HOH A 34 1034 1034 HOH HOH . C 3 HOH A 35 1035 1035 HOH HOH . C 3 HOH A 36 1036 1036 HOH HOH . C 3 HOH A 37 1037 1037 HOH HOH . C 3 HOH A 38 1038 1038 HOH HOH . C 3 HOH A 39 1039 1039 HOH HOH . C 3 HOH A 40 1040 1040 HOH HOH . C 3 HOH A 41 1041 1041 HOH HOH . C 3 HOH A 42 1042 1042 HOH HOH . C 3 HOH A 43 1043 1043 HOH HOH . C 3 HOH A 44 1044 1044 HOH HOH . C 3 HOH A 45 1045 1045 HOH HOH . C 3 HOH A 46 1046 1046 HOH HOH . C 3 HOH A 47 1047 1047 HOH HOH . C 3 HOH A 48 1048 1048 HOH HOH . C 3 HOH A 49 1049 1049 HOH HOH . C 3 HOH A 50 1050 1050 HOH HOH . C 3 HOH A 51 1051 1051 HOH HOH . C 3 HOH A 52 1052 1052 HOH HOH . C 3 HOH A 53 1053 1053 HOH HOH . C 3 HOH A 54 1054 1054 HOH HOH . C 3 HOH A 55 1055 1055 HOH HOH . C 3 HOH A 56 1056 1056 HOH HOH . C 3 HOH A 57 1057 1057 HOH HOH . C 3 HOH A 58 1058 1058 HOH HOH . C 3 HOH A 59 1059 1059 HOH HOH . C 3 HOH A 60 1060 1060 HOH HOH . C 3 HOH A 61 1061 1061 HOH HOH . C 3 HOH A 62 1062 1062 HOH HOH . C 3 HOH A 63 1063 1063 HOH HOH . C 3 HOH A 64 1064 1064 HOH HOH . C 3 HOH A 65 1065 1065 HOH HOH . C 3 HOH A 66 1066 1066 HOH HOH . C 3 HOH A 67 1067 1067 HOH HOH . C 3 HOH A 68 1068 1068 HOH HOH . C 3 HOH A 69 1069 1069 HOH HOH . C 3 HOH A 70 1070 1070 HOH HOH . C 3 HOH A 71 1071 1071 HOH HOH . C 3 HOH A 72 1072 1072 HOH HOH . C 3 HOH A 73 1073 1073 HOH HOH . C 3 HOH A 74 1074 1074 HOH HOH . C 3 HOH A 75 1075 1075 HOH HOH . C 3 HOH A 76 1076 1076 HOH HOH . C 3 HOH A 77 1077 1077 HOH HOH . C 3 HOH A 78 1078 1078 HOH HOH . C 3 HOH A 79 1079 1079 HOH HOH . C 3 HOH A 80 1080 1080 HOH HOH . C 3 HOH A 81 1081 1081 HOH HOH . C 3 HOH A 82 1082 1082 HOH HOH . C 3 HOH A 83 1083 1083 HOH HOH . C 3 HOH A 84 1084 1084 HOH HOH . C 3 HOH A 85 1085 1085 HOH HOH . C 3 HOH A 86 1086 1086 HOH HOH . C 3 HOH A 87 1087 1087 HOH HOH . C 3 HOH A 88 1088 1088 HOH HOH . C 3 HOH A 89 1089 1089 HOH HOH . C 3 HOH A 90 1090 1090 HOH HOH . C 3 HOH A 91 1091 1091 HOH HOH . C 3 HOH A 92 1092 1092 HOH HOH . C 3 HOH A 93 1093 1093 HOH HOH . C 3 HOH A 94 1094 1094 HOH HOH . C 3 HOH A 95 1095 1095 HOH HOH . C 3 HOH A 96 1096 1096 HOH HOH . C 3 HOH A 97 1097 1097 HOH HOH . C 3 HOH A 98 1098 1098 HOH HOH . C 3 HOH A 99 1099 1099 HOH HOH . C 3 HOH A 100 1100 1100 HOH HOH . C 3 HOH A 101 1101 1101 HOH HOH . C 3 HOH A 102 1102 1102 HOH HOH . C 3 HOH A 103 1103 1103 HOH HOH . C 3 HOH A 104 1104 1104 HOH HOH . C 3 HOH A 105 1105 1105 HOH HOH . C 3 HOH A 106 1106 1106 HOH HOH . C 3 HOH A 107 1107 1107 HOH HOH . C 3 HOH A 108 1108 1108 HOH HOH . C 3 HOH A 109 1109 1109 HOH HOH . C 3 HOH A 110 1110 1110 HOH HOH . C 3 HOH A 111 1111 1111 HOH HOH . C 3 HOH A 112 1112 1112 HOH HOH . C 3 HOH A 113 1113 1113 HOH HOH . C 3 HOH A 114 1114 1114 HOH HOH . C 3 HOH A 115 1115 1115 HOH HOH . C 3 HOH A 116 1116 1116 HOH HOH . C 3 HOH A 117 1117 1117 HOH HOH . C 3 HOH A 118 1118 1118 HOH HOH . C 3 HOH A 119 1119 1119 HOH HOH . C 3 HOH A 120 1120 1120 HOH HOH . C 3 HOH A 121 1121 1121 HOH HOH . C 3 HOH A 122 1122 1122 HOH HOH . C 3 HOH A 123 1123 1123 HOH HOH . C 3 HOH A 124 1124 1124 HOH HOH . C 3 HOH A 125 1125 1125 HOH HOH . C 3 HOH A 126 1126 1126 HOH HOH . C 3 HOH A 127 1127 1127 HOH HOH . C 3 HOH A 128 1128 1128 HOH HOH . C 3 HOH A 129 1129 1129 HOH HOH . C 3 HOH A 130 1130 1130 HOH HOH . C 3 HOH A 131 1131 1131 HOH HOH . C 3 HOH A 132 1132 1132 HOH HOH . C 3 HOH A 133 1133 1133 HOH HOH . C 3 HOH A 134 1134 1134 HOH HOH . C 3 HOH A 135 1135 1135 HOH HOH . C 3 HOH A 136 1136 1136 HOH HOH . C 3 HOH A 137 1137 1137 HOH HOH . C 3 HOH A 138 1138 1138 HOH HOH . C 3 HOH A 139 1139 1139 HOH HOH . C 3 HOH A 140 1140 1140 HOH HOH . C 3 HOH A 141 1141 1141 HOH HOH . C 3 HOH A 142 1142 1142 HOH HOH . C 3 HOH A 143 1143 1143 HOH HOH . C 3 HOH A 144 1144 1144 HOH HOH . C 3 HOH A 145 1145 1145 HOH HOH . C 3 HOH A 146 1146 1146 HOH HOH . C 3 HOH A 147 1147 1147 HOH HOH . C 3 HOH A 148 1148 1148 HOH HOH . C 3 HOH A 149 1149 1149 HOH HOH . C 3 HOH A 150 1150 1150 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 AIH . . . B 2 31.02 -0.159 28.883 1 32.28 ? C1 AIH 600 A 1 HETATM 2 C C2 AIH . . . B 2 31.229 -1.602 28.354 1 29.35 ? C2 AIH 600 A 1 HETATM 3 O O3 AIH . . . B 2 29.999 -2.326 28.603 1 33.23 ? O3 AIH 600 A 1 HETATM 4 C C4 AIH . . . B 2 28.787 -1.902 28.125 1 31.43 ? C4 AIH 600 A 1 HETATM 5 C C5 AIH . . . B 2 27.877 -2.901 27.817 1 29.67 ? C5 AIH 600 A 1 HETATM 6 C C6 AIH . . . B 2 26.62 -2.596 27.297 1 29.89 ? C6 AIH 600 A 1 HETATM 7 C C7 AIH . . . B 2 26.251 -1.229 27.161 1 29.49 ? C7 AIH 600 A 1 HETATM 8 O O8 AIH . . . B 2 25.01 -0.983 26.658 1 28.07 ? O8 AIH 600 A 1 HETATM 9 C C9 AIH . . . B 2 27.176 -0.226 27.485 1 27.29 ? C9 AIH 600 A 1 HETATM 10 C C10 AIH . . . B 2 28.471 -0.533 27.9 1 30.35 ? C10 AIH 600 A 1 HETATM 11 S S11 AIH . . . B 2 29.485 0.535 28.271 1 32.66 ? S11 AIH 600 A 1 HETATM 12 C C12 AIH . . . B 2 32.321 0.557 28.581 1 33.64 ? C12 AIH 600 A 1 HETATM 13 C C13 AIH . . . B 2 32.528 1.364 27.455 1 30.57 ? C13 AIH 600 A 1 HETATM 14 C C14 AIH . . . B 2 33.79 1.961 27.325 1 31.69 ? C14 AIH 600 A 1 HETATM 15 C C15 AIH . . . B 2 34.818 1.746 28.277 1 33.84 ? C15 AIH 600 A 1 HETATM 16 O O16 AIH . . . B 2 36.036 2.308 28.108 1 35.88 ? O16 AIH 600 A 1 HETATM 17 C C17 AIH . . . B 2 34.602 0.947 29.406 1 35.1 ? C17 AIH 600 A 1 HETATM 18 C C18 AIH . . . B 2 33.332 0.342 29.531 1 31.93 ? C18 AIH 600 A 1 HETATM 19 C C19 AIH . . . B 2 31.6 -1.796 26.874 1 31.02 ? C19 AIH 600 A 1 HETATM 20 C C20 AIH . . . B 2 32.598 -2.767 26.602 1 34.44 ? C20 AIH 600 A 1 HETATM 21 C C21 AIH . . . B 2 33.038 -3.036 25.301 1 33 ? C21 AIH 600 A 1 HETATM 22 C C22 AIH . . . B 2 32.428 -2.341 24.225 1 33.86 ? C22 AIH 600 A 1 HETATM 23 C C23 AIH . . . B 2 31.472 -1.381 24.485 1 30.41 ? C23 AIH 600 A 1 HETATM 24 C C24 AIH . . . B 2 31.049 -1.088 25.819 1 31.14 ? C24 AIH 600 A 1 HETATM 25 O O25 AIH . . . B 2 32.832 -2.575 22.951 1 33.5 ? O25 AIH 600 A 1 HETATM 26 C C26 AIH . . . B 2 33.662 -3.702 22.619 1 37.79 ? C26 AIH 600 A 1 HETATM 27 C C27 AIH . . . B 2 33.833 -3.81 21.091 1 44.09 ? C27 AIH 600 A 1 HETATM 28 N N28 AIH . . . B 2 32.6 -4.042 20.3 1 47.02 ? N28 AIH 600 A 1 HETATM 29 C C29 AIH . . . B 2 33.051 -4.028 18.888 1 51.43 ? C29 AIH 600 A 1 HETATM 30 C C30 AIH . . . B 2 31.712 -3.861 18.138 1 53.91 ? C30 AIH 600 A 1 HETATM 31 C C31 AIH . . . B 2 31.886 -3.574 16.646 1 61.96 ? C31 AIH 600 A 1 HETATM 32 C C32 AIH . . . B 2 31.12 -2.676 18.919 1 54.08 ? C32 AIH 600 A 1 HETATM 33 C C33 AIH . . . B 2 29.596 -2.678 18.789 1 55.08 ? C33 AIH 600 A 1 HETATM 34 C C34 AIH . . . B 2 31.611 -2.936 20.369 1 48.78 ? C34 AIH 600 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 34 #