data_1XP6 # _model_server_result.job_id 6zsbSsYzsh1t4O4zHyqoPQ _model_server_result.datetime_utc '2024-11-04 20:09:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xp6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":600}' # _entry.id 1XP6 # _exptl.entry_id 1XP6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 477.615 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S,3R)-2-(4-{2-[(3S,4S)-3,4-DIMETHYLPYRROLIDIN-1-YL]ETHOXY}PHENYL)-3-(4-HYDROXYPHENYL)-2,3-DIHYDRO-1,4-BENZOXATHIIN-6-OL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1XP6 _cell.length_a 58.57 _cell.length_b 58.57 _cell.length_c 276.31 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XP6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 29.285 50.723108 46.051667 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C28 H31 N O4 S' _chem_comp.formula_weight 477.615 _chem_comp.id AIU _chem_comp.mon_nstd_flag . _chem_comp.name (2S,3R)-2-(4-{2-[(3S,4S)-3,4-DIMETHYLPYRROLIDIN-1-YL]ETHOXY}PHENYL)-3-(4-HYDROXYPHENYL)-2,3-DIHYDRO-1,4-BENZOXATHIIN-6-OL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'COMPOUND 16' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 AIU sing 1 n n C1 S11 AIU sing 2 n n C1 C12 AIU sing 3 n n C1 H1 AIU sing 4 n n C2 O3 AIU sing 5 n n C2 C19 AIU sing 6 n n C2 H2 AIU sing 7 n n O3 C4 AIU sing 8 n n C4 C5 AIU doub 9 n y C4 C10 AIU sing 10 n y C5 C6 AIU sing 11 n y C5 H5 AIU sing 12 n n C6 C7 AIU doub 13 n y C6 H6 AIU sing 14 n n C7 O8 AIU sing 15 n n C7 C9 AIU sing 16 n y O8 HO8 AIU sing 17 n n C9 C10 AIU doub 18 n y C9 H9 AIU sing 19 n n C10 S11 AIU sing 20 n n C12 C13 AIU doub 21 n y C12 C18 AIU sing 22 n y C13 C14 AIU sing 23 n y C13 H13 AIU sing 24 n n C14 C15 AIU doub 25 n y C14 H14 AIU sing 26 n n C15 O16 AIU sing 27 n n C15 C17 AIU sing 28 n y O16 H16 AIU sing 29 n n C17 C18 AIU doub 30 n y C17 H17 AIU sing 31 n n C18 H18 AIU sing 32 n n C19 C20 AIU doub 33 n y C19 C24 AIU sing 34 n y C20 C21 AIU sing 35 n y C20 H20 AIU sing 36 n n C21 C22 AIU doub 37 n y C21 H21 AIU sing 38 n n C22 C23 AIU sing 39 n y C22 O25 AIU sing 40 n n C23 C24 AIU doub 41 n y C23 H23 AIU sing 42 n n C24 H24 AIU sing 43 n n O25 C26 AIU sing 44 n n C26 C27 AIU sing 45 n n C26 H261 AIU sing 46 n n C26 H262 AIU sing 47 n n C27 N28 AIU sing 48 n n C27 H271 AIU sing 49 n n C27 H272 AIU sing 50 n n N28 C29 AIU sing 51 n n N28 C34 AIU sing 52 n n C29 C30 AIU sing 53 n n C29 H291 AIU sing 54 n n C29 H292 AIU sing 55 n n C30 C31 AIU sing 56 n n C30 C32 AIU sing 57 n n C30 H30 AIU sing 58 n n C31 H311 AIU sing 59 n n C31 H312 AIU sing 60 n n C31 H313 AIU sing 61 n n C32 C33 AIU sing 62 n n C32 C34 AIU sing 63 n n C32 H32 AIU sing 64 n n C33 H331 AIU sing 65 n n C33 H332 AIU sing 66 n n C33 H333 AIU sing 67 n n C34 H341 AIU sing 68 n n C34 H342 AIU sing 69 n n # _atom_sites.entry_id 1XP6 _atom_sites.fract_transf_matrix[1][1] 0.017074 _atom_sites.fract_transf_matrix[1][2] 0.009857 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019715 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003619 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AIU A 1 600 600 AIU INH . C 3 HOH A 1 1001 1001 HOH HOH . C 3 HOH A 2 1002 1002 HOH HOH . C 3 HOH A 3 1003 1003 HOH HOH . C 3 HOH A 4 1004 1004 HOH HOH . C 3 HOH A 5 1005 1005 HOH HOH . C 3 HOH A 6 1006 1006 HOH HOH . C 3 HOH A 7 1007 1007 HOH HOH . C 3 HOH A 8 1008 1008 HOH HOH . C 3 HOH A 9 1009 1009 HOH HOH . C 3 HOH A 10 1010 1010 HOH HOH . C 3 HOH A 11 1011 1011 HOH HOH . C 3 HOH A 12 1012 1012 HOH HOH . C 3 HOH A 13 1013 1013 HOH HOH . C 3 HOH A 14 1014 1014 HOH HOH . C 3 HOH A 15 1015 1015 HOH HOH . C 3 HOH A 16 1016 1016 HOH HOH . C 3 HOH A 17 1017 1017 HOH HOH . C 3 HOH A 18 1018 1018 HOH HOH . C 3 HOH A 19 1019 1019 HOH HOH . C 3 HOH A 20 1020 1020 HOH HOH . C 3 HOH A 21 1021 1021 HOH HOH . C 3 HOH A 22 1022 1022 HOH HOH . C 3 HOH A 23 1023 1023 HOH HOH . C 3 HOH A 24 1024 1024 HOH HOH . C 3 HOH A 25 1025 1025 HOH HOH . C 3 HOH A 26 1026 1026 HOH HOH . C 3 HOH A 27 1027 1027 HOH HOH . C 3 HOH A 28 1028 1028 HOH HOH . C 3 HOH A 29 1029 1029 HOH HOH . C 3 HOH A 30 1030 1030 HOH HOH . C 3 HOH A 31 1031 1031 HOH HOH . C 3 HOH A 32 1032 1032 HOH HOH . C 3 HOH A 33 1033 1033 HOH HOH . C 3 HOH A 34 1034 1034 HOH HOH . C 3 HOH A 35 1035 1035 HOH HOH . C 3 HOH A 36 1036 1036 HOH HOH . C 3 HOH A 37 1037 1037 HOH HOH . C 3 HOH A 38 1038 1038 HOH HOH . C 3 HOH A 39 1039 1039 HOH HOH . C 3 HOH A 40 1040 1040 HOH HOH . C 3 HOH A 41 1041 1041 HOH HOH . C 3 HOH A 42 1042 1042 HOH HOH . C 3 HOH A 43 1043 1043 HOH HOH . C 3 HOH A 44 1044 1044 HOH HOH . C 3 HOH A 45 1045 1045 HOH HOH . C 3 HOH A 46 1046 1046 HOH HOH . C 3 HOH A 47 1047 1047 HOH HOH . C 3 HOH A 48 1048 1048 HOH HOH . C 3 HOH A 49 1049 1049 HOH HOH . C 3 HOH A 50 1050 1050 HOH HOH . C 3 HOH A 51 1051 1051 HOH HOH . C 3 HOH A 52 1052 1052 HOH HOH . C 3 HOH A 53 1053 1053 HOH HOH . C 3 HOH A 54 1054 1054 HOH HOH . C 3 HOH A 55 1055 1055 HOH HOH . C 3 HOH A 56 1056 1056 HOH HOH . C 3 HOH A 57 1057 1057 HOH HOH . C 3 HOH A 58 1058 1058 HOH HOH . C 3 HOH A 59 1059 1059 HOH HOH . C 3 HOH A 60 1060 1060 HOH HOH . C 3 HOH A 61 1061 1061 HOH HOH . C 3 HOH A 62 1062 1062 HOH HOH . C 3 HOH A 63 1063 1063 HOH HOH . C 3 HOH A 64 1064 1064 HOH HOH . C 3 HOH A 65 1065 1065 HOH HOH . C 3 HOH A 66 1066 1066 HOH HOH . C 3 HOH A 67 1067 1067 HOH HOH . C 3 HOH A 68 1068 1068 HOH HOH . C 3 HOH A 69 1069 1069 HOH HOH . C 3 HOH A 70 1070 1070 HOH HOH . C 3 HOH A 71 1071 1071 HOH HOH . C 3 HOH A 72 1072 1072 HOH HOH . C 3 HOH A 73 1073 1073 HOH HOH . C 3 HOH A 74 1074 1074 HOH HOH . C 3 HOH A 75 1075 1075 HOH HOH . C 3 HOH A 76 1076 1076 HOH HOH . C 3 HOH A 77 1077 1077 HOH HOH . C 3 HOH A 78 1078 1078 HOH HOH . C 3 HOH A 79 1079 1079 HOH HOH . C 3 HOH A 80 1080 1080 HOH HOH . C 3 HOH A 81 1081 1081 HOH HOH . C 3 HOH A 82 1082 1082 HOH HOH . C 3 HOH A 83 1083 1083 HOH HOH . C 3 HOH A 84 1084 1084 HOH HOH . C 3 HOH A 85 1085 1085 HOH HOH . C 3 HOH A 86 1086 1086 HOH HOH . C 3 HOH A 87 1087 1087 HOH HOH . C 3 HOH A 88 1088 1088 HOH HOH . C 3 HOH A 89 1089 1089 HOH HOH . C 3 HOH A 90 1090 1090 HOH HOH . C 3 HOH A 91 1091 1091 HOH HOH . C 3 HOH A 92 1092 1092 HOH HOH . C 3 HOH A 93 1093 1093 HOH HOH . C 3 HOH A 94 1094 1094 HOH HOH . C 3 HOH A 95 1095 1095 HOH HOH . C 3 HOH A 96 1096 1096 HOH HOH . C 3 HOH A 97 1097 1097 HOH HOH . C 3 HOH A 98 1098 1098 HOH HOH . C 3 HOH A 99 1099 1099 HOH HOH . C 3 HOH A 100 1100 1100 HOH HOH . C 3 HOH A 101 1101 1101 HOH HOH . C 3 HOH A 102 1102 1102 HOH HOH . C 3 HOH A 103 1103 1103 HOH HOH . C 3 HOH A 104 1104 1104 HOH HOH . C 3 HOH A 105 1105 1105 HOH HOH . C 3 HOH A 106 1106 1106 HOH HOH . C 3 HOH A 107 1107 1107 HOH HOH . C 3 HOH A 108 1108 1108 HOH HOH . C 3 HOH A 109 1109 1109 HOH HOH . C 3 HOH A 110 1110 1110 HOH HOH . C 3 HOH A 111 1111 1111 HOH HOH . C 3 HOH A 112 1112 1112 HOH HOH . C 3 HOH A 113 1113 1113 HOH HOH . C 3 HOH A 114 1114 1114 HOH HOH . C 3 HOH A 115 1115 1115 HOH HOH . C 3 HOH A 116 1116 1116 HOH HOH . C 3 HOH A 117 1117 1117 HOH HOH . C 3 HOH A 118 1118 1118 HOH HOH . C 3 HOH A 119 1119 1119 HOH HOH . C 3 HOH A 120 1120 1120 HOH HOH . C 3 HOH A 121 1121 1121 HOH HOH . C 3 HOH A 122 1122 1122 HOH HOH . C 3 HOH A 123 1123 1123 HOH HOH . C 3 HOH A 124 1124 1124 HOH HOH . C 3 HOH A 125 1125 1125 HOH HOH . C 3 HOH A 126 1126 1126 HOH HOH . C 3 HOH A 127 1127 1127 HOH HOH . C 3 HOH A 128 1128 1128 HOH HOH . C 3 HOH A 129 1129 1129 HOH HOH . C 3 HOH A 130 1130 1130 HOH HOH . C 3 HOH A 131 1131 1131 HOH HOH . C 3 HOH A 132 1132 1132 HOH HOH . C 3 HOH A 133 1133 1133 HOH HOH . C 3 HOH A 134 1134 1134 HOH HOH . C 3 HOH A 135 1135 1135 HOH HOH . C 3 HOH A 136 1136 1136 HOH HOH . C 3 HOH A 137 1137 1137 HOH HOH . C 3 HOH A 138 1138 1138 HOH HOH . C 3 HOH A 139 1139 1139 HOH HOH . C 3 HOH A 140 1140 1140 HOH HOH . C 3 HOH A 141 1141 1141 HOH HOH . C 3 HOH A 142 1142 1142 HOH HOH . C 3 HOH A 143 1143 1143 HOH HOH . C 3 HOH A 144 1144 1144 HOH HOH . C 3 HOH A 145 1145 1145 HOH HOH . C 3 HOH A 146 1146 1146 HOH HOH . C 3 HOH A 147 1147 1147 HOH HOH . C 3 HOH A 148 1148 1148 HOH HOH . C 3 HOH A 149 1149 1149 HOH HOH . C 3 HOH A 150 1150 1150 HOH HOH . C 3 HOH A 151 1151 1151 HOH HOH . C 3 HOH A 152 1152 1152 HOH HOH . C 3 HOH A 153 1153 1153 HOH HOH . C 3 HOH A 154 1154 1154 HOH HOH . C 3 HOH A 155 1155 1155 HOH HOH . C 3 HOH A 156 1156 1156 HOH HOH . C 3 HOH A 157 1157 1157 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 AIU . . . B 2 31.027 -0.19 28.783 1 27.85 ? C1 AIU 600 A 1 HETATM 2 C C2 AIU . . . B 2 31.225 -1.634 28.242 1 25.31 ? C2 AIU 600 A 1 HETATM 3 O O3 AIU . . . B 2 30.021 -2.383 28.507 1 27.64 ? O3 AIU 600 A 1 HETATM 4 C C4 AIU . . . B 2 28.801 -1.919 28.051 1 27.09 ? C4 AIU 600 A 1 HETATM 5 C C5 AIU . . . B 2 27.89 -2.928 27.753 1 26.15 ? C5 AIU 600 A 1 HETATM 6 C C6 AIU . . . B 2 26.611 -2.636 27.266 1 27.59 ? C6 AIU 600 A 1 HETATM 7 C C7 AIU . . . B 2 26.266 -1.264 27.136 1 27.05 ? C7 AIU 600 A 1 HETATM 8 O O8 AIU . . . B 2 25.04 -0.97 26.645 1 26.68 ? O8 AIU 600 A 1 HETATM 9 C C9 AIU . . . B 2 27.19 -0.255 27.46 1 24.99 ? C9 AIU 600 A 1 HETATM 10 C C10 AIU . . . B 2 28.485 -0.553 27.891 1 27.31 ? C10 AIU 600 A 1 HETATM 11 S S11 AIU . . . B 2 29.502 0.553 28.175 1 30.03 ? S11 AIU 600 A 1 HETATM 12 C C12 AIU . . . B 2 32.333 0.529 28.488 1 30.41 ? C12 AIU 600 A 1 HETATM 13 C C13 AIU . . . B 2 32.504 1.373 27.377 1 26.44 ? C13 AIU 600 A 1 HETATM 14 C C14 AIU . . . B 2 33.76 1.973 27.217 1 27.44 ? C14 AIU 600 A 1 HETATM 15 C C15 AIU . . . B 2 34.785 1.727 28.148 1 30.13 ? C15 AIU 600 A 1 HETATM 16 O O16 AIU . . . B 2 36.015 2.243 27.946 1 32 ? O16 AIU 600 A 1 HETATM 17 C C17 AIU . . . B 2 34.596 0.902 29.272 1 30.7 ? C17 AIU 600 A 1 HETATM 18 C C18 AIU . . . B 2 33.344 0.294 29.433 1 28.89 ? C18 AIU 600 A 1 HETATM 19 C C19 AIU . . . B 2 31.576 -1.841 26.763 1 26.51 ? C19 AIU 600 A 1 HETATM 20 C C20 AIU . . . B 2 32.499 -2.861 26.462 1 30.45 ? C20 AIU 600 A 1 HETATM 21 C C21 AIU . . . B 2 32.886 -3.141 25.13 1 29.43 ? C21 AIU 600 A 1 HETATM 22 C C22 AIU . . . B 2 32.338 -2.408 24.067 1 31.59 ? C22 AIU 600 A 1 HETATM 23 C C23 AIU . . . B 2 31.457 -1.375 24.362 1 26.33 ? C23 AIU 600 A 1 HETATM 24 C C24 AIU . . . B 2 31.055 -1.117 25.686 1 27.38 ? C24 AIU 600 A 1 HETATM 25 O O25 AIU . . . B 2 32.72 -2.61 22.779 1 31.17 ? O25 AIU 600 A 1 HETATM 26 C C26 AIU . . . B 2 33.395 -3.834 22.439 1 37.09 ? C26 AIU 600 A 1 HETATM 27 C C27 AIU . . . B 2 33.795 -3.944 20.958 1 38.83 ? C27 AIU 600 A 1 HETATM 28 N N28 AIU . . . B 2 32.691 -4.079 19.994 1 40.54 ? N28 AIU 600 A 1 HETATM 29 C C29 AIU . . . B 2 33.33 -4.129 18.654 1 43.09 ? C29 AIU 600 A 1 HETATM 30 C C30 AIU . . . B 2 32.284 -3.557 17.67 1 43.85 ? C30 AIU 600 A 1 HETATM 31 C C31 AIU . . . B 2 31.808 -4.613 16.65 1 41.13 ? C31 AIU 600 A 1 HETATM 32 C C32 AIU . . . B 2 31.098 -3.178 18.579 1 42.73 ? C32 AIU 600 A 1 HETATM 33 C C33 AIU . . . B 2 30.309 -1.993 18.01 1 50.83 ? C33 AIU 600 A 1 HETATM 34 C C34 AIU . . . B 2 31.799 -2.9 19.922 1 41.5 ? C34 AIU 600 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 34 #