data_1XPO # _model_server_result.job_id 88VgnSTVNt2tnjcMGTgnqg _model_server_result.datetime_utc '2024-11-09 02:40:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xpo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":4601}' # _entry.id 1XPO # _exptl.entry_id 1XPO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.79 _cell.angle_gamma 90 _cell.entry_id 1XPO _cell.length_a 211.933 _cell.length_b 111.37 _cell.length_c 161.033 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XPO _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 ? dimeric 2 author_defined_assembly 3 ? dimeric 2 author_defined_assembly 4 ? dimeric 2 author_defined_assembly 5 ? dimeric 2 author_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G,M,N 1 1 B,H,O,P,Q 2 1 C,I,R,S,T 3 1 D,J,U,V,W 4 1 E,K,X,Y,Z 5 1 F,L,AA,BA,CA 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 M N N ? 3 O N N ? 3 R N N ? 3 U N N ? 3 X N N ? 3 AA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 N O2G AGS . A AGS 1600 1_555 M MG MG . A MG 1601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? metalc ? metalc2 M MG MG . A MG 1601 1_555 G NH2 ARG 212 A ARG 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc3 M MG MG . A MG 1601 1_555 G OE2 GLU 215 A GLU 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc4 M MG MG . A MG 1601 1_555 G OG1 THR 185 A THR 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.814 ? metalc ? metalc5 O MG MG . B MG 2601 1_555 Q O2A BCM . B BCM 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc6 O MG MG . B MG 2601 1_555 P O2G AGS . B AGS 2600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc7 O MG MG . B MG 2601 1_555 P O2B AGS . B AGS 2600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.829 ? metalc ? metalc8 O MG MG . B MG 2601 1_555 H OG1 THR 185 B THR 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.704 ? metalc ? metalc9 R MG MG . C MG 3601 1_555 I OG1 THR 185 C THR 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc10 R MG MG . C MG 3601 1_555 S O2G AGS . C AGS 3600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.016 ? metalc ? metalc11 R MG MG . C MG 3601 1_555 S O2B AGS . C AGS 3600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc12 R MG MG . C MG 3601 1_555 T O9 BCM . C BCM 3701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.872 ? metalc ? metalc13 U MG MG . D MG 4601 1_555 V O2B AGS . D AGS 4600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.804 ? metalc ? metalc14 U MG MG . D MG 4601 1_555 V O2G AGS . D AGS 4600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc15 U MG MG . D MG 4601 1_555 J OG1 THR 185 D THR 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? covale ? covale1 Y O2G AGS . E AGS 5600 1_555 J NH2 ARG 366 D ARG 366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.899 ? metalc ? metalc16 X MG MG . E MG 5601 1_555 K OG1 THR 185 E THR 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc17 X MG MG . E MG 5601 1_555 K NH2 ARG 212 E ARG 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? metalc ? metalc18 X MG MG . E MG 5601 1_555 Z O2A BCM . E BCM 5701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.823 ? metalc ? metalc19 X MG MG . E MG 5601 1_555 Y O2G AGS . E AGS 5600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? metalc ? metalc20 X MG MG . E MG 5601 1_555 J NH2 ARG 366 D ARG 366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc21 AA MG MG . F MG 6601 1_555 BA O2G AGS . F AGS 6600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc22 AA MG MG . F MG 6601 1_555 L OE1 GLU 215 F GLU 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.028 ? metalc ? metalc23 AA MG MG . F MG 6601 1_555 L OG1 THR 185 F THR 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc24 AA MG MG . F MG 6601 1_555 BA O2B AGS . F AGS 6600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.016 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1XPO _atom_sites.fract_transf_matrix[1][1] 0.004718 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001605 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008979 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006559 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 MG A 1 1601 1601 MG MG . N 4 AGS A 1 1600 1600 AGS AGS . O 3 MG B 1 2601 2601 MG MG . P 4 AGS B 1 2600 2600 AGS AGS . Q 5 BCM B 1 2701 2701 BCM BCM . R 3 MG C 1 3601 3601 MG MG . S 4 AGS C 1 3600 3600 AGS AGS . T 5 BCM C 1 3701 3701 BCM BCM . U 3 MG D 1 4601 4601 MG MG . V 4 AGS D 1 4600 4600 AGS AGS . W 5 BCM D 1 4701 4701 BCM BCM . X 3 MG E 1 5601 5601 MG MG . Y 4 AGS E 1 5600 5600 AGS AGS . Z 5 BCM E 1 5701 5701 BCM BCM . AA 3 MG F 1 6601 6601 MG MG . BA 4 AGS F 1 6600 6600 AGS AGS . CA 5 BCM F 1 6701 6701 BCM BCM . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id U _atom_site.label_entity_id 3 _atom_site.Cartn_x 29.961 _atom_site.Cartn_y 28.342 _atom_site.Cartn_z 43.32 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 70.49 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 4601 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #