data_1XPU # _model_server_result.job_id EN1uLl1wBjiyLe2vl2rx4A _model_server_result.datetime_utc '2025-04-28 07:15:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xpu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1601}' # _entry.id 1XPU # _exptl.entry_id 1XPU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.95 _cell.angle_gamma 90 _cell.entry_id 1XPU _cell.length_a 119.477 _cell.length_b 206.935 _cell.length_c 148.607 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XPU _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 ? dimeric 2 author_defined_assembly 3 ? dimeric 2 author_defined_assembly 4 ? dimeric 2 author_defined_assembly 5 ? dimeric 2 author_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G,M,N,DA,FA 1 1 B,H,O,P,Q,GA 2 1 C,I,R,S,T,EA,HA 3 1 D,J,U,V,W,IA 4 1 E,K,X,Y,Z,AA,JA 5 1 F,L,BA,CA,KA 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 M N N ? 3 O N N ? 3 R N N ? 3 U N N ? 3 X N N ? 3 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 G OG1 THR 185 A THR 185 1_555 M MG MG . A MG 1601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc2 N O2B AGS . A AGS 1600 1_555 M MG MG . A MG 1601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc3 N O2G AGS . A AGS 1600 1_555 M MG MG . A MG 1601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc4 H NZ LYS 184 B LYS 184 1_555 O MG MG . B MG 2601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.93 ? metalc ? metalc5 H OG1 THR 185 B THR 185 1_555 O MG MG . B MG 2601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc6 P O2G AGS . B AGS 2600 1_555 O MG MG . B MG 2601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.913 ? metalc ? metalc7 O MG MG . B MG 2601 1_555 Q O6 FPD . B FPD 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.132 ? metalc ? metalc8 O MG MG . B MG 2601 1_555 GA O HOH . B HOH 2702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.098 ? metalc ? metalc9 I OG1 THR 185 C THR 185 1_555 R MG MG . C MG 3601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.654 ? metalc ? metalc10 I OD2 ASP 265 C ASP 265 1_555 R MG MG . C MG 3601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? metalc ? metalc11 J OG1 THR 185 D THR 185 1_555 U MG MG . D MG 4601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc12 V O2B AGS . D AGS 4600 1_555 U MG MG . D MG 4601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.8 ? metalc ? metalc13 V O2G AGS . D AGS 4600 1_555 U MG MG . D MG 4601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc14 K OG1 THR 185 E THR 185 1_555 X MG MG . E MG 5601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc15 AA O2B AGS . E AGS 6600 1_555 BA MG MG . F MG 6601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? metalc ? metalc16 AA O2G AGS . E AGS 6600 1_555 BA MG MG . F MG 6601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc17 L OG1 THR 185 F THR 185 1_555 BA MG MG . F MG 6601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc18 BA MG MG . F MG 6601 1_555 CA O6 FPD . F FPD 6701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.145 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1XPU _atom_sites.fract_transf_matrix[1][1] 0.00837 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00102 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004832 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006779 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 MG A 1 1601 1601 MG MG . N 4 AGS A 1 1600 1600 AGS AGS . O 3 MG B 1 2601 2601 MG MG . P 4 AGS B 1 2600 2600 AGS AGS . Q 5 FPD B 1 2701 2701 FPD FPD . R 3 MG C 1 3601 3601 MG MG . S 4 AGS C 1 3600 3600 AGS AGS . T 5 FPD C 1 3701 3701 FPD FPD . U 3 MG D 1 4601 4601 MG MG . V 4 AGS D 1 4600 4600 AGS AGS . W 5 FPD D 1 4701 4701 FPD FPD . X 3 MG E 1 5601 5601 MG MG . Y 4 AGS E 1 5600 5600 AGS AGS . Z 5 FPD E 1 5701 5701 FPD FPD . AA 4 AGS E 1 6600 6600 AGS AGS . BA 3 MG F 1 6601 6601 MG MG . CA 5 FPD F 1 6701 6701 FPD FPD . DA 6 HOH G 1 12 12 HOH HOH . EA 6 HOH H 1 15 15 HOH HOH . FA 6 HOH A 1 1602 2 HOH HOH . FA 6 HOH A 2 1603 8 HOH HOH . GA 6 HOH B 1 2702 3 HOH HOH . GA 6 HOH B 2 2703 5 HOH HOH . GA 6 HOH B 3 2704 9 HOH HOH . GA 6 HOH B 4 2705 17 HOH HOH . GA 6 HOH B 5 2706 19 HOH HOH . HA 6 HOH C 1 3702 6 HOH HOH . HA 6 HOH C 2 3703 14 HOH HOH . HA 6 HOH C 3 3704 20 HOH HOH . IA 6 HOH D 1 4702 7 HOH HOH . IA 6 HOH D 2 4703 11 HOH HOH . IA 6 HOH D 3 4704 13 HOH HOH . IA 6 HOH D 4 4705 18 HOH HOH . JA 6 HOH E 1 6601 4 HOH HOH . JA 6 HOH E 2 6602 10 HOH HOH . JA 6 HOH E 3 6603 16 HOH HOH . KA 6 HOH F 1 6702 1 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 3 _atom_site.Cartn_x 1.055 _atom_site.Cartn_y -33.601 _atom_site.Cartn_z 18.476 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 54.09 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1601 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 82 _model_server_stats.parse_time_ms 41 _model_server_stats.create_model_time_ms 122 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #