data_1XR5 # _model_server_result.job_id x00Vank-CH0oQoX4A-8iuw _model_server_result.datetime_utc '2024-12-27 00:53:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xr5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":901}' # _entry.id 1XR5 # _exptl.entry_id 1XR5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.36 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SAMARIUM (III) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1XR5 _cell.length_a 97.326 _cell.length_b 97.326 _cell.length_c 153.113 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XR5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 233 A ASP 233 1_555 B SM SM . A SM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.889 ? metalc ? metalc2 A OD2 ASP 233 A ASP 233 1_555 B SM SM . A SM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc3 A OD1 ASP 327 A ASP 327 1_555 B SM SM . A SM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc4 A OD2 ASP 327 A ASP 327 1_555 B SM SM . A SM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.101 ? metalc ? metalc5 A OD2 ASP 328 A ASP 328 1_555 B SM SM . A SM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? metalc ? metalc6 B SM SM . A SM 901 1_555 C O HOH . A HOH 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.622 ? metalc ? metalc7 B SM SM . A SM 901 1_555 C O HOH . A HOH 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.998 ? # _chem_comp.formula 'Sm 3' _chem_comp.formula_weight 150.36 _chem_comp.id SM _chem_comp.mon_nstd_flag . _chem_comp.name 'SAMARIUM (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1XR5 _atom_sites.fract_transf_matrix[1][1] 0.010275 _atom_sites.fract_transf_matrix[1][2] 0.005932 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011864 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006531 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SM A 1 901 901 SM SM . C 3 HOH A 1 902 461 HOH HOH . C 3 HOH A 2 903 462 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol SM _atom_site.label_atom_id SM _atom_site.label_comp_id SM _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -14.572 _atom_site.Cartn_y 58.86 _atom_site.Cartn_z 11.495 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 66.26 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id SM _atom_site.auth_comp_id SM _atom_site.auth_seq_id 901 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #