data_1XRC # _model_server_result.job_id peo-aQded93nEVAjtAYjwg _model_server_result.datetime_utc '2024-11-24 11:31:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xrc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":384}' # _entry.id 1XRC # _exptl.entry_id 1XRC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1XRC _cell.length_a 128.9 _cell.length_b 128.9 _cell.length_c 139.8 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XRC _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 9_555 -x,-x+y,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 46.6 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 16 A ASP 16 9_555 E CO CO . A CO 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.726 ? metalc ? metalc2 A OE2 GLU 42 A GLU 42 1_555 F K K . A K 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.696 ? metalc ? metalc3 A OE1 GLU 42 A GLU 42 1_555 F K K . A K 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc4 A O GLY 243 A GLY 243 1_555 G K K . A K 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? metalc ? metalc5 A O GLY 243 A GLY 243 9_555 G K K . A K 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? metalc ? metalc6 A O SER 263 A SER 263 1_555 F K K . A K 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? metalc ? metalc7 B O4 PO4 . A PO4 384 1_555 D CO CO . A CO 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc8 B O1 PO4 . A PO4 384 1_555 D CO CO . A CO 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc9 B O3 PO4 . A PO4 384 1_555 E CO CO . A CO 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc10 C O1 PO4 . A PO4 385 1_555 D CO CO . A CO 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc11 C O2 PO4 . A PO4 385 1_555 E CO CO . A CO 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 258 n n P O2 PO4 sing 259 n n P O3 PO4 sing 260 n n P O4 PO4 sing 261 n n # _atom_sites.entry_id 1XRC _atom_sites.fract_transf_matrix[1][1] 0.007758 _atom_sites.fract_transf_matrix[1][2] 0.004479 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008958 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007153 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 384 384 PO4 PO4 . C 2 PO4 A 1 385 385 PO4 PO4 . D 3 CO A 1 411 411 CO CO . E 3 CO A 1 412 412 CO CO . F 4 K A 1 413 413 K K . G 4 K A 1 414 414 K K . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . B 2 -13.489 42.788 18.183 1 55.15 ? P PO4 384 A 1 HETATM 2 O O1 PO4 . . . B 2 -13.085 41.5 18.783 1 59.53 ? O1 PO4 384 A 1 HETATM 3 O O2 PO4 . . . B 2 -12.372 43.721 18.237 1 53.18 ? O2 PO4 384 A 1 HETATM 4 O O3 PO4 . . . B 2 -14.679 43.382 18.823 1 60.71 ? O3 PO4 384 A 1 HETATM 5 O O4 PO4 . . . B 2 -13.817 42.353 16.828 1 61.74 ? O4 PO4 384 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #