data_1XRP # _model_server_result.job_id kzLfXZCgP8yf64lWbMc0bg _model_server_result.datetime_utc '2025-04-14 12:05:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xrp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 1XRP # _exptl.entry_id 1XRP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 115.13 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PROLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1XRP _cell.length_a 50.42 _cell.length_b 60.52 _cell.length_c 79.91 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XRP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 5 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 5 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 22 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 22 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.033 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C5 H9 N O2' _chem_comp.formula_weight 115.13 _chem_comp.id PRO _chem_comp.mon_nstd_flag y _chem_comp.name PROLINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA PRO sing 260 n n N CD PRO sing 261 n n N H PRO sing 262 n n CA C PRO sing 263 n n CA CB PRO sing 264 n n CA HA PRO sing 265 n n C O PRO doub 266 n n C OXT PRO sing 267 n n CB CG PRO sing 268 n n CB HB2 PRO sing 269 n n CB HB3 PRO sing 270 n n CG CD PRO sing 271 n n CG HG2 PRO sing 272 n n CG HG3 PRO sing 273 n n CD HD2 PRO sing 274 n n CD HD3 PRO sing 275 n n OXT HXT PRO sing 276 n n # _atom_sites.entry_id 1XRP _atom_sites.fract_transf_matrix[1][1] 0.019833 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016523 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012514 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PRO A 1 301 301 PRO PRO . D 4 HOH A 1 302 1 HOH WAT . D 4 HOH A 2 303 2 HOH WAT . D 4 HOH A 3 304 3 HOH WAT . D 4 HOH A 4 305 4 HOH WAT . D 4 HOH A 5 306 5 HOH WAT . D 4 HOH A 6 307 6 HOH WAT . D 4 HOH A 7 308 8 HOH WAT . D 4 HOH A 8 309 9 HOH WAT . D 4 HOH A 9 310 10 HOH WAT . D 4 HOH A 10 311 11 HOH WAT . D 4 HOH A 11 312 12 HOH WAT . D 4 HOH A 12 313 13 HOH WAT . D 4 HOH A 13 314 14 HOH WAT . D 4 HOH A 14 315 15 HOH WAT . D 4 HOH A 15 316 16 HOH WAT . D 4 HOH A 16 317 17 HOH WAT . D 4 HOH A 17 318 18 HOH WAT . D 4 HOH A 18 319 19 HOH WAT . D 4 HOH A 19 320 20 HOH WAT . D 4 HOH A 20 321 21 HOH WAT . D 4 HOH A 21 322 22 HOH WAT . D 4 HOH A 22 323 23 HOH WAT . D 4 HOH A 23 324 24 HOH WAT . D 4 HOH A 24 325 25 HOH WAT . D 4 HOH A 25 326 26 HOH WAT . D 4 HOH A 26 327 27 HOH WAT . D 4 HOH A 27 328 28 HOH WAT . D 4 HOH A 28 329 29 HOH WAT . D 4 HOH A 29 330 30 HOH WAT . D 4 HOH A 30 331 31 HOH WAT . D 4 HOH A 31 332 32 HOH WAT . D 4 HOH A 32 333 33 HOH WAT . D 4 HOH A 33 334 34 HOH WAT . D 4 HOH A 34 335 35 HOH WAT . D 4 HOH A 35 336 36 HOH WAT . D 4 HOH A 36 337 37 HOH WAT . D 4 HOH A 37 338 38 HOH WAT . D 4 HOH A 38 339 39 HOH WAT . D 4 HOH A 39 340 40 HOH WAT . D 4 HOH A 40 341 41 HOH WAT . D 4 HOH A 41 342 42 HOH WAT . D 4 HOH A 42 343 43 HOH WAT . D 4 HOH A 43 344 44 HOH WAT . D 4 HOH A 44 345 45 HOH WAT . D 4 HOH A 45 346 46 HOH WAT . D 4 HOH A 46 347 47 HOH WAT . D 4 HOH A 47 348 48 HOH WAT . D 4 HOH A 48 349 49 HOH WAT . D 4 HOH A 49 350 50 HOH WAT . D 4 HOH A 50 351 51 HOH WAT . D 4 HOH A 51 352 53 HOH WAT . D 4 HOH A 52 353 54 HOH WAT . D 4 HOH A 53 354 55 HOH WAT . D 4 HOH A 54 355 56 HOH WAT . D 4 HOH A 55 356 57 HOH WAT . D 4 HOH A 56 357 58 HOH WAT . D 4 HOH A 57 358 59 HOH WAT . D 4 HOH A 58 359 60 HOH WAT . D 4 HOH A 59 360 61 HOH WAT . D 4 HOH A 60 361 62 HOH WAT . D 4 HOH A 61 362 63 HOH WAT . D 4 HOH A 62 363 64 HOH WAT . D 4 HOH A 63 364 65 HOH WAT . D 4 HOH A 64 365 66 HOH WAT . D 4 HOH A 65 366 67 HOH WAT . D 4 HOH A 66 367 68 HOH WAT . D 4 HOH A 67 368 69 HOH WAT . D 4 HOH A 68 369 70 HOH WAT . D 4 HOH A 69 370 71 HOH WAT . D 4 HOH A 70 371 72 HOH WAT . D 4 HOH A 71 372 73 HOH WAT . D 4 HOH A 72 373 74 HOH WAT . D 4 HOH A 73 374 75 HOH WAT . D 4 HOH A 74 375 76 HOH WAT . D 4 HOH A 75 376 77 HOH WAT . D 4 HOH A 76 377 78 HOH WAT . D 4 HOH A 77 378 79 HOH WAT . D 4 HOH A 78 379 80 HOH WAT . D 4 HOH A 79 380 81 HOH WAT . D 4 HOH A 80 381 82 HOH WAT . D 4 HOH A 81 382 83 HOH WAT . D 4 HOH A 82 383 84 HOH WAT . D 4 HOH A 83 384 85 HOH WAT . D 4 HOH A 84 385 86 HOH WAT . D 4 HOH A 85 386 87 HOH WAT . D 4 HOH A 86 387 88 HOH WAT . D 4 HOH A 87 388 89 HOH WAT . D 4 HOH A 88 389 90 HOH WAT . D 4 HOH A 89 390 91 HOH WAT . D 4 HOH A 90 391 92 HOH WAT . D 4 HOH A 91 392 93 HOH WAT . D 4 HOH A 92 393 94 HOH WAT . D 4 HOH A 93 394 95 HOH WAT . D 4 HOH A 94 395 96 HOH WAT . D 4 HOH A 95 396 97 HOH WAT . D 4 HOH A 96 397 98 HOH WAT . D 4 HOH A 97 398 99 HOH WAT . D 4 HOH A 98 399 100 HOH WAT . D 4 HOH A 99 400 101 HOH WAT . D 4 HOH A 100 401 102 HOH WAT . D 4 HOH A 101 402 103 HOH WAT . D 4 HOH A 102 403 104 HOH WAT . D 4 HOH A 103 404 105 HOH WAT . D 4 HOH A 104 405 106 HOH WAT . D 4 HOH A 105 406 107 HOH WAT . D 4 HOH A 106 407 108 HOH WAT . D 4 HOH A 107 408 109 HOH WAT . D 4 HOH A 108 409 110 HOH WAT . D 4 HOH A 109 410 111 HOH WAT . D 4 HOH A 110 411 112 HOH WAT . D 4 HOH A 111 412 113 HOH WAT . D 4 HOH A 112 413 114 HOH WAT . D 4 HOH A 113 414 115 HOH WAT . D 4 HOH A 114 415 116 HOH WAT . D 4 HOH A 115 416 117 HOH WAT . D 4 HOH A 116 417 118 HOH WAT . D 4 HOH A 117 418 119 HOH WAT . E 4 HOH Q 1 7 7 HOH WAT . E 4 HOH Q 2 52 52 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PRO . . . C 3 17.61 8.986 9.029 1 19.88 ? N PRO 301 A 1 HETATM 2 C CA PRO . . . C 3 16.512 9.751 8.363 1 19.84 ? CA PRO 301 A 1 HETATM 3 C C PRO . . . C 3 15.541 10.227 9.433 1 19.89 ? C PRO 301 A 1 HETATM 4 O O PRO . . . C 3 15.729 11.377 9.9 1 19.98 ? O PRO 301 A 1 HETATM 5 C CB PRO . . . C 3 15.827 8.807 7.402 1 19.74 ? CB PRO 301 A 1 HETATM 6 C CG PRO . . . C 3 16.075 7.466 8.086 1 19.84 ? CG PRO 301 A 1 HETATM 7 C CD PRO . . . C 3 17.504 7.56 8.692 1 19.82 ? CD PRO 301 A 1 HETATM 8 O OXT PRO . . . C 3 14.649 9.423 9.824 1 20 ? OXT PRO 301 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #