data_1XUF # _model_server_result.job_id R91B86FR4t-nfExFTPiyAg _model_server_result.datetime_utc '2024-10-16 10:26:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xuf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":247}' # _entry.id 1XUF # _exptl.entry_id 1XUF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1XUF _cell.length_a 54.8 _cell.length_b 58.7 _cell.length_c 67.6 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XUF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc1 A NE2 HIS 40 A HIS 57 1_555 C ZN BAZ . A BAZ 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.929 ? metalc ? metalc2 A OE1 GLU 52 A GLU 70 1_555 B CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc3 A O ASN 54 A ASN 72 1_555 B CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc4 A O VAL 57 A VAL 75 1_555 B CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc5 A OE2 GLU 62 A GLU 80 1_555 B CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc6 A OG SER 177 A SER 195 1_555 C ZN BAZ . A BAZ 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc7 B CA CA . A CA 247 1_555 D O HOH . A HOH 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc8 B CA CA . A CA 247 1_555 D O HOH . A HOH 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1XUF _atom_sites.fract_transf_matrix[1][1] 0.018248 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017036 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014793 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 247 247 CA CA . C 3 BAZ A 1 246 246 BAZ BAZ . D 4 HOH A 1 248 248 HOH HOH . D 4 HOH A 2 249 249 HOH HOH . D 4 HOH A 3 250 250 HOH HOH . D 4 HOH A 4 251 251 HOH HOH . D 4 HOH A 5 252 252 HOH HOH . D 4 HOH A 6 253 253 HOH HOH . D 4 HOH A 7 255 255 HOH HOH . D 4 HOH A 8 256 256 HOH HOH . D 4 HOH A 9 257 257 HOH HOH . D 4 HOH A 10 258 258 HOH HOH . D 4 HOH A 11 259 259 HOH HOH . D 4 HOH A 12 260 260 HOH HOH . D 4 HOH A 13 261 261 HOH HOH . D 4 HOH A 14 262 262 HOH HOH . D 4 HOH A 15 263 263 HOH HOH . D 4 HOH A 16 264 264 HOH HOH . D 4 HOH A 17 265 265 HOH HOH . D 4 HOH A 18 266 266 HOH HOH . D 4 HOH A 19 267 267 HOH HOH . D 4 HOH A 20 268 268 HOH HOH . D 4 HOH A 21 269 269 HOH HOH . D 4 HOH A 22 270 270 HOH HOH . D 4 HOH A 23 271 271 HOH HOH . D 4 HOH A 24 272 272 HOH HOH . D 4 HOH A 25 273 273 HOH HOH . D 4 HOH A 26 274 274 HOH HOH . D 4 HOH A 27 275 275 HOH HOH . D 4 HOH A 28 276 276 HOH HOH . D 4 HOH A 29 277 277 HOH HOH . D 4 HOH A 30 278 278 HOH HOH . D 4 HOH A 31 279 279 HOH HOH . D 4 HOH A 32 280 280 HOH HOH . D 4 HOH A 33 281 281 HOH HOH . D 4 HOH A 34 282 282 HOH HOH . D 4 HOH A 35 283 283 HOH HOH . D 4 HOH A 36 284 284 HOH HOH . D 4 HOH A 37 285 285 HOH HOH . D 4 HOH A 38 286 286 HOH HOH . D 4 HOH A 39 287 287 HOH HOH . D 4 HOH A 40 288 288 HOH HOH . D 4 HOH A 41 289 289 HOH HOH . D 4 HOH A 42 290 290 HOH HOH . D 4 HOH A 43 291 291 HOH HOH . D 4 HOH A 44 292 292 HOH HOH . D 4 HOH A 45 293 293 HOH HOH . D 4 HOH A 46 294 294 HOH HOH . D 4 HOH A 47 295 295 HOH HOH . D 4 HOH A 48 296 296 HOH HOH . D 4 HOH A 49 297 297 HOH HOH . D 4 HOH A 50 298 298 HOH HOH . D 4 HOH A 51 299 299 HOH HOH . D 4 HOH A 52 300 300 HOH HOH . D 4 HOH A 53 301 301 HOH HOH . D 4 HOH A 54 302 302 HOH HOH . D 4 HOH A 55 303 303 HOH HOH . D 4 HOH A 56 305 305 HOH HOH . D 4 HOH A 57 306 306 HOH HOH . D 4 HOH A 58 307 307 HOH HOH . D 4 HOH A 59 308 308 HOH HOH . D 4 HOH A 60 309 309 HOH HOH . D 4 HOH A 61 310 310 HOH HOH . D 4 HOH A 62 311 311 HOH HOH . D 4 HOH A 63 312 312 HOH HOH . D 4 HOH A 64 314 314 HOH HOH . D 4 HOH A 65 315 315 HOH HOH . D 4 HOH A 66 316 316 HOH HOH . D 4 HOH A 67 317 317 HOH HOH . D 4 HOH A 68 318 318 HOH HOH . D 4 HOH A 69 319 319 HOH HOH . D 4 HOH A 70 322 322 HOH HOH . D 4 HOH A 71 323 323 HOH HOH . D 4 HOH A 72 324 324 HOH HOH . D 4 HOH A 73 325 325 HOH HOH . D 4 HOH A 74 326 326 HOH HOH . D 4 HOH A 75 328 328 HOH HOH . D 4 HOH A 76 329 329 HOH HOH . D 4 HOH A 77 330 330 HOH HOH . D 4 HOH A 78 331 331 HOH HOH . D 4 HOH A 79 332 332 HOH HOH . D 4 HOH A 80 333 333 HOH HOH . D 4 HOH A 81 334 334 HOH HOH . D 4 HOH A 82 335 335 HOH HOH . D 4 HOH A 83 339 339 HOH HOH . D 4 HOH A 84 340 340 HOH HOH . D 4 HOH A 85 341 341 HOH HOH . D 4 HOH A 86 342 342 HOH HOH . D 4 HOH A 87 343 343 HOH HOH . D 4 HOH A 88 344 344 HOH HOH . D 4 HOH A 89 346 346 HOH HOH . D 4 HOH A 90 348 348 HOH HOH . D 4 HOH A 91 349 349 HOH HOH . D 4 HOH A 92 352 352 HOH HOH . D 4 HOH A 93 353 353 HOH HOH . D 4 HOH A 94 354 354 HOH HOH . D 4 HOH A 95 355 355 HOH HOH . D 4 HOH A 96 357 357 HOH HOH . D 4 HOH A 97 359 359 HOH HOH . D 4 HOH A 98 360 360 HOH HOH . D 4 HOH A 99 361 361 HOH HOH . D 4 HOH A 100 362 362 HOH HOH . D 4 HOH A 101 363 363 HOH HOH . D 4 HOH A 102 364 364 HOH HOH . D 4 HOH A 103 367 367 HOH HOH . D 4 HOH A 104 368 368 HOH HOH . D 4 HOH A 105 370 370 HOH HOH . D 4 HOH A 106 371 371 HOH HOH . D 4 HOH A 107 372 372 HOH HOH . D 4 HOH A 108 375 375 HOH HOH . D 4 HOH A 109 377 377 HOH HOH . D 4 HOH A 110 379 379 HOH HOH . D 4 HOH A 111 382 382 HOH HOH . D 4 HOH A 112 385 385 HOH HOH . D 4 HOH A 113 386 386 HOH HOH . D 4 HOH A 114 387 387 HOH HOH . D 4 HOH A 115 388 388 HOH HOH . D 4 HOH A 116 389 389 HOH HOH . D 4 HOH A 117 391 391 HOH HOH . D 4 HOH A 118 394 394 HOH HOH . D 4 HOH A 119 395 395 HOH HOH . D 4 HOH A 120 397 397 HOH HOH . D 4 HOH A 121 398 398 HOH HOH . D 4 HOH A 122 399 399 HOH HOH . D 4 HOH A 123 400 400 HOH HOH . D 4 HOH A 124 401 401 HOH HOH . D 4 HOH A 125 403 403 HOH HOH . D 4 HOH A 126 404 404 HOH HOH . D 4 HOH A 127 406 406 HOH HOH . D 4 HOH A 128 408 408 HOH HOH . D 4 HOH A 129 410 410 HOH HOH . D 4 HOH A 130 412 412 HOH HOH . D 4 HOH A 131 414 414 HOH HOH . D 4 HOH A 132 416 416 HOH HOH . D 4 HOH A 133 422 422 HOH HOH . D 4 HOH A 134 424 424 HOH HOH . D 4 HOH A 135 426 426 HOH HOH . D 4 HOH A 136 427 427 HOH HOH . D 4 HOH A 137 429 429 HOH HOH . D 4 HOH A 138 430 430 HOH HOH . D 4 HOH A 139 432 432 HOH HOH . D 4 HOH A 140 433 433 HOH HOH . D 4 HOH A 141 434 434 HOH HOH . D 4 HOH A 142 436 436 HOH HOH . D 4 HOH A 143 437 437 HOH HOH . D 4 HOH A 144 439 439 HOH HOH . D 4 HOH A 145 444 444 HOH HOH . D 4 HOH A 146 446 446 HOH HOH . D 4 HOH A 147 451 451 HOH HOH . D 4 HOH A 148 452 452 HOH HOH . D 4 HOH A 149 453 453 HOH HOH . D 4 HOH A 150 455 455 HOH HOH . D 4 HOH A 151 459 459 HOH HOH . D 4 HOH A 152 464 464 HOH HOH . D 4 HOH A 153 468 468 HOH HOH . D 4 HOH A 154 469 469 HOH HOH . D 4 HOH A 155 473 473 HOH HOH . D 4 HOH A 156 476 476 HOH HOH . D 4 HOH A 157 482 482 HOH HOH . D 4 HOH A 158 484 484 HOH HOH . D 4 HOH A 159 486 486 HOH HOH . D 4 HOH A 160 488 488 HOH HOH . D 4 HOH A 161 492 492 HOH HOH . D 4 HOH A 162 494 494 HOH HOH . D 4 HOH A 163 495 495 HOH HOH . D 4 HOH A 164 500 500 HOH HOH . D 4 HOH A 165 503 503 HOH HOH . D 4 HOH A 166 508 508 HOH HOH . D 4 HOH A 167 510 510 HOH HOH . D 4 HOH A 168 511 511 HOH HOH . D 4 HOH A 169 512 512 HOH HOH . D 4 HOH A 170 514 514 HOH HOH . D 4 HOH A 171 515 515 HOH HOH . D 4 HOH A 172 516 516 HOH HOH . D 4 HOH A 173 517 517 HOH HOH . D 4 HOH A 174 518 518 HOH HOH . D 4 HOH A 175 519 519 HOH HOH . D 4 HOH A 176 520 520 HOH HOH . D 4 HOH A 177 522 522 HOH HOH . D 4 HOH A 178 524 524 HOH HOH . D 4 HOH A 179 525 525 HOH HOH . D 4 HOH A 180 528 528 HOH HOH . D 4 HOH A 181 529 529 HOH HOH . D 4 HOH A 182 530 530 HOH HOH . D 4 HOH A 183 531 531 HOH HOH . D 4 HOH A 184 533 533 HOH HOH . D 4 HOH A 185 535 535 HOH HOH . D 4 HOH A 186 536 536 HOH HOH . D 4 HOH A 187 537 537 HOH HOH . D 4 HOH A 188 539 539 HOH HOH . D 4 HOH A 189 540 540 HOH HOH . D 4 HOH A 190 541 541 HOH HOH . D 4 HOH A 191 542 542 HOH HOH . D 4 HOH A 192 543 543 HOH HOH . D 4 HOH A 193 544 544 HOH HOH . D 4 HOH A 194 545 545 HOH HOH . D 4 HOH A 195 546 546 HOH HOH . D 4 HOH A 196 547 547 HOH HOH . D 4 HOH A 197 548 548 HOH HOH . D 4 HOH A 198 549 549 HOH HOH . D 4 HOH A 199 550 550 HOH HOH . D 4 HOH A 200 552 552 HOH HOH . D 4 HOH A 201 553 553 HOH HOH . D 4 HOH A 202 554 554 HOH HOH . D 4 HOH A 203 555 555 HOH HOH . D 4 HOH A 204 556 556 HOH HOH . D 4 HOH A 205 557 557 HOH HOH . D 4 HOH A 206 558 558 HOH HOH . D 4 HOH A 207 560 560 HOH HOH . D 4 HOH A 208 561 561 HOH HOH . D 4 HOH A 209 562 562 HOH HOH . D 4 HOH A 210 563 563 HOH HOH . D 4 HOH A 211 565 565 HOH HOH . D 4 HOH A 212 566 566 HOH HOH . D 4 HOH A 213 567 567 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 37.876 _atom_site.Cartn_y 24.882 _atom_site.Cartn_z 36.965 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.82 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 247 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #