data_1XUH # _model_server_result.job_id g03cmEwuQfhaJHB8zJESQw _model_server_result.datetime_utc '2024-11-29 12:57:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xuh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":246}' # _entry.id 1XUH # _exptl.entry_id 1XUH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1XUH _cell.length_a 54.99 _cell.length_b 54.99 _cell.length_c 109.63 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XUH _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A NE2 HIS 40 A HIS 57 1_555 B CO CO . A CO 246 1_555 ? ? ? A ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc2 A OE1 GLU 52 A GLU 70 1_555 C CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc3 A O ASN 54 A ASN 72 1_555 C CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc4 A O VAL 57 A VAL 75 1_555 C CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc5 A OE2 GLU 62 A GLU 80 1_555 C CA CA . A CA 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? metalc ? metalc6 A OG SER 177 A SER 195 1_555 B CO CO . A CO 246 1_555 ? ? ? A ? ? ? ? ? ? ? ? 1.869 ? metalc ? metalc7 B CO CO . A CO 246 1_555 E N3 BAO . A BAO 369 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc8 B CO CO . A CO 246 1_555 E N3' BAO . A BAO 369 1_555 A ? ? ? ? ? ? ? ? ? ? ? 1.822 ? metalc ? metalc9 C CA CA . A CA 247 1_555 F O HOH . A HOH 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc10 C CA CA . A CA 247 1_555 F O HOH . A HOH 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1XUH _atom_sites.fract_transf_matrix[1][1] 0.018185 _atom_sites.fract_transf_matrix[1][2] 0.010499 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020998 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009122 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 246 246 CO CO A C 3 CA A 1 247 247 CA CA . D 4 SO4 A 1 368 368 SO4 SO4 . E 5 BAO A 1 369 246 BAO BAO . F 6 HOH A 1 370 248 HOH HOH . F 6 HOH A 2 371 249 HOH HOH . F 6 HOH A 3 372 250 HOH HOH . F 6 HOH A 4 373 251 HOH HOH . F 6 HOH A 5 374 252 HOH HOH . F 6 HOH A 6 375 253 HOH HOH . F 6 HOH A 7 376 254 HOH HOH . F 6 HOH A 8 377 255 HOH HOH . F 6 HOH A 9 378 256 HOH HOH . F 6 HOH A 10 379 257 HOH HOH . F 6 HOH A 11 380 258 HOH HOH . F 6 HOH A 12 381 259 HOH HOH . F 6 HOH A 13 382 260 HOH HOH . F 6 HOH A 14 383 261 HOH HOH . F 6 HOH A 15 384 262 HOH HOH . F 6 HOH A 16 385 263 HOH HOH . F 6 HOH A 17 386 264 HOH HOH . F 6 HOH A 18 387 265 HOH HOH . F 6 HOH A 19 388 266 HOH HOH . F 6 HOH A 20 389 267 HOH HOH . F 6 HOH A 21 390 268 HOH HOH . F 6 HOH A 22 391 269 HOH HOH . F 6 HOH A 23 392 270 HOH HOH . F 6 HOH A 24 393 271 HOH HOH . F 6 HOH A 25 394 272 HOH HOH . F 6 HOH A 26 395 273 HOH HOH . F 6 HOH A 27 396 274 HOH HOH . F 6 HOH A 28 397 275 HOH HOH . F 6 HOH A 29 398 276 HOH HOH . F 6 HOH A 30 399 277 HOH HOH . F 6 HOH A 31 400 278 HOH HOH . F 6 HOH A 32 401 279 HOH HOH . F 6 HOH A 33 402 280 HOH HOH . F 6 HOH A 34 403 281 HOH HOH . F 6 HOH A 35 404 282 HOH HOH . F 6 HOH A 36 405 283 HOH HOH . F 6 HOH A 37 406 284 HOH HOH . F 6 HOH A 38 407 285 HOH HOH . F 6 HOH A 39 408 286 HOH HOH . F 6 HOH A 40 409 287 HOH HOH . F 6 HOH A 41 410 288 HOH HOH . F 6 HOH A 42 411 289 HOH HOH . F 6 HOH A 43 412 290 HOH HOH . F 6 HOH A 44 413 291 HOH HOH . F 6 HOH A 45 414 292 HOH HOH . F 6 HOH A 46 415 293 HOH HOH . F 6 HOH A 47 416 294 HOH HOH . F 6 HOH A 48 417 295 HOH HOH . F 6 HOH A 49 418 297 HOH HOH . F 6 HOH A 50 419 298 HOH HOH . F 6 HOH A 51 420 299 HOH HOH . F 6 HOH A 52 421 300 HOH HOH . F 6 HOH A 53 422 301 HOH HOH . F 6 HOH A 54 423 302 HOH HOH . F 6 HOH A 55 424 303 HOH HOH . F 6 HOH A 56 425 304 HOH HOH . F 6 HOH A 57 426 305 HOH HOH . F 6 HOH A 58 427 306 HOH HOH . F 6 HOH A 59 428 307 HOH HOH . F 6 HOH A 60 429 308 HOH HOH . F 6 HOH A 61 430 309 HOH HOH . F 6 HOH A 62 431 310 HOH HOH . F 6 HOH A 63 432 311 HOH HOH . F 6 HOH A 64 433 312 HOH HOH . F 6 HOH A 65 434 313 HOH HOH . F 6 HOH A 66 435 314 HOH HOH . F 6 HOH A 67 436 316 HOH HOH . F 6 HOH A 68 437 319 HOH HOH . F 6 HOH A 69 438 320 HOH HOH . F 6 HOH A 70 439 321 HOH HOH . F 6 HOH A 71 440 323 HOH HOH . F 6 HOH A 72 441 324 HOH HOH . F 6 HOH A 73 442 325 HOH HOH . F 6 HOH A 74 443 328 HOH HOH . F 6 HOH A 75 444 330 HOH HOH . F 6 HOH A 76 445 331 HOH HOH . F 6 HOH A 77 446 332 HOH HOH . F 6 HOH A 78 447 333 HOH HOH . F 6 HOH A 79 448 335 HOH HOH . F 6 HOH A 80 449 336 HOH HOH . F 6 HOH A 81 450 337 HOH HOH . F 6 HOH A 82 451 338 HOH HOH . F 6 HOH A 83 452 339 HOH HOH . F 6 HOH A 84 453 340 HOH HOH . F 6 HOH A 85 454 343 HOH HOH . F 6 HOH A 86 455 344 HOH HOH . F 6 HOH A 87 456 345 HOH HOH . F 6 HOH A 88 457 346 HOH HOH . F 6 HOH A 89 458 349 HOH HOH . F 6 HOH A 90 459 350 HOH HOH . F 6 HOH A 91 460 351 HOH HOH . F 6 HOH A 92 461 352 HOH HOH . F 6 HOH A 93 462 353 HOH HOH . F 6 HOH A 94 463 354 HOH HOH . F 6 HOH A 95 464 355 HOH HOH . F 6 HOH A 96 465 356 HOH HOH . F 6 HOH A 97 466 362 HOH HOH . F 6 HOH A 98 467 363 HOH HOH . F 6 HOH A 99 468 364 HOH HOH . F 6 HOH A 100 469 365 HOH HOH . F 6 HOH A 101 470 369 HOH HOH . F 6 HOH A 102 471 370 HOH HOH . F 6 HOH A 103 472 372 HOH HOH . F 6 HOH A 104 473 373 HOH HOH . F 6 HOH A 105 474 376 HOH HOH . F 6 HOH A 106 475 377 HOH HOH . F 6 HOH A 107 476 378 HOH HOH . F 6 HOH A 108 477 379 HOH HOH . F 6 HOH A 109 478 380 HOH HOH . F 6 HOH A 110 479 381 HOH HOH . F 6 HOH A 111 480 383 HOH HOH . F 6 HOH A 112 481 385 HOH HOH . F 6 HOH A 113 482 386 HOH HOH . F 6 HOH A 114 483 388 HOH HOH . F 6 HOH A 115 484 389 HOH HOH . F 6 HOH A 116 485 390 HOH HOH . F 6 HOH A 117 486 392 HOH HOH . F 6 HOH A 118 487 393 HOH HOH . F 6 HOH A 119 488 395 HOH HOH . F 6 HOH A 120 489 396 HOH HOH . F 6 HOH A 121 490 401 HOH HOH . F 6 HOH A 122 491 404 HOH HOH . F 6 HOH A 123 492 405 HOH HOH . F 6 HOH A 124 493 406 HOH HOH . F 6 HOH A 125 494 408 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code A _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 43.426 _atom_site.Cartn_y 22.646 _atom_site.Cartn_z 48.23 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39.41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 246 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #