data_1XV8
#
_model_server_result.job_id            7Njt-8Nyrc3GWnLn8wFaTw 
_model_server_result.datetime_utc      '2024-12-23 07:06:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1xv8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":497}' 
#
_entry.id    1XV8 
#
_exptl.entry_id    1XV8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.8 
_cell.angle_gamma         90 
_cell.entry_id            1XV8 
_cell.length_a            150.812 
_cell.length_b            72.27 
_cell.length_c            91.106 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1XV8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 28 A CYS 28 1_555 A SG CYS 86 A CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf2 A SG CYS 70 A CYS 70 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf3 A SG CYS 141 A CYS 141 1_555 A SG CYS 160 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf4 A SG CYS 378 A CYS 378 1_555 A SG CYS 384 A CYS 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf5 A SG CYS 450 A CYS 450 1_555 A SG CYS 462 A CYS 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf6 B SG CYS 28 B CYS 28 1_555 B SG CYS 86 B CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf7 B SG CYS 70 B CYS 70 1_555 B SG CYS 115 B CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf8 B SG CYS 141 B CYS 141 1_555 B SG CYS 160 B CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf9 B SG CYS 378 B CYS 378 1_555 B SG CYS 384 B CYS 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf10 B SG CYS 450 B CYS 450 1_555 B SG CYS 462 B CYS 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
covale ? covale1 A C PCA 1 A PCA 1 1_555 A N TYR 2 A TYR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale2 B C PCA 1 B PCA 1 1_555 B N TYR 2 B TYR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
metalc ? metalc1 A OD1 ASN 100 A ASN 100 1_555 C CA CA . A CA 497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? 
metalc ? metalc2 A O ARG 158 A ARG 158 1_555 C CA CA . A CA 497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
metalc ? metalc3 A OD1 ASP 167 A ASP 167 1_555 C CA CA . A CA 497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
metalc ? metalc4 A OD2 ASP 167 A ASP 167 1_555 C CA CA . A CA 497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.683 ? 
metalc ? metalc5 A O HIS 201 A HIS 201 1_555 C CA CA . A CA 497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? 
metalc ? metalc6 C CA CA . A CA 497 1_555 G O HOH . A HOH 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? 
metalc ? metalc7 B OD1 ASN 100 B ASN 100 1_555 E CA CA . B CA 497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? 
metalc ? metalc8 B O ARG 158 B ARG 158 1_555 E CA CA . B CA 497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
metalc ? metalc9 B OD1 ASP 167 B ASP 167 1_555 E CA CA . B CA 497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
metalc ? metalc10 B OD2 ASP 167 B ASP 167 1_555 E CA CA . B CA 497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.684 ? 
metalc ? metalc11 B O HIS 201 B HIS 201 1_555 E CA CA . B CA 497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc12 E CA CA . B CA 497 1_555 H O HOH . B HOH 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1XV8 
_atom_sites.fract_transf_matrix[1][1]    0.006631 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001506 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013837 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011256 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CA A 1 497 1 CA CA . 
D 3 CL A 1 498 4 CL CL . 
E 2 CA B 1 497 2 CA CA . 
F 3 CL B 1 498 3 CL CL . 
G 4 HOH A 1 499 5 HOH HOH . 
G 4 HOH A 2 500 6 HOH HOH . 
G 4 HOH A 3 501 7 HOH HOH . 
G 4 HOH A 4 502 8 HOH HOH . 
G 4 HOH A 5 503 9 HOH HOH . 
G 4 HOH A 6 504 10 HOH HOH . 
G 4 HOH A 7 505 11 HOH HOH . 
G 4 HOH A 8 506 12 HOH HOH . 
G 4 HOH A 9 507 13 HOH HOH . 
G 4 HOH A 10 508 14 HOH HOH . 
G 4 HOH A 11 509 15 HOH HOH . 
G 4 HOH A 12 510 16 HOH HOH . 
G 4 HOH A 13 511 17 HOH HOH . 
G 4 HOH A 14 512 18 HOH HOH . 
G 4 HOH A 15 513 19 HOH HOH . 
G 4 HOH A 16 514 20 HOH HOH . 
G 4 HOH A 17 515 21 HOH HOH . 
G 4 HOH A 18 516 23 HOH HOH . 
G 4 HOH A 19 517 24 HOH HOH . 
G 4 HOH A 20 518 25 HOH HOH . 
G 4 HOH A 21 519 27 HOH HOH . 
G 4 HOH A 22 520 28 HOH HOH . 
G 4 HOH A 23 521 29 HOH HOH . 
G 4 HOH A 24 522 30 HOH HOH . 
G 4 HOH A 25 523 31 HOH HOH . 
G 4 HOH A 26 524 32 HOH HOH . 
G 4 HOH A 27 525 33 HOH HOH . 
G 4 HOH A 28 526 34 HOH HOH . 
G 4 HOH A 29 527 35 HOH HOH . 
G 4 HOH A 30 528 36 HOH HOH . 
G 4 HOH A 31 529 37 HOH HOH . 
G 4 HOH A 32 530 38 HOH HOH . 
G 4 HOH A 33 531 39 HOH HOH . 
G 4 HOH A 34 532 40 HOH HOH . 
G 4 HOH A 35 533 41 HOH HOH . 
G 4 HOH A 36 534 43 HOH HOH . 
G 4 HOH A 37 535 44 HOH HOH . 
G 4 HOH A 38 536 45 HOH HOH . 
G 4 HOH A 39 537 46 HOH HOH . 
G 4 HOH A 40 538 47 HOH HOH . 
G 4 HOH A 41 539 48 HOH HOH . 
G 4 HOH A 42 540 49 HOH HOH . 
G 4 HOH A 43 541 50 HOH HOH . 
G 4 HOH A 44 542 51 HOH HOH . 
G 4 HOH A 45 543 52 HOH HOH . 
G 4 HOH A 46 544 53 HOH HOH . 
G 4 HOH A 47 545 54 HOH HOH . 
G 4 HOH A 48 546 55 HOH HOH . 
G 4 HOH A 49 547 56 HOH HOH . 
G 4 HOH A 50 548 57 HOH HOH . 
G 4 HOH A 51 549 58 HOH HOH . 
G 4 HOH A 52 550 59 HOH HOH . 
G 4 HOH A 53 551 60 HOH HOH . 
G 4 HOH A 54 552 61 HOH HOH . 
G 4 HOH A 55 553 62 HOH HOH . 
G 4 HOH A 56 554 63 HOH HOH . 
G 4 HOH A 57 555 64 HOH HOH . 
G 4 HOH A 58 556 65 HOH HOH . 
G 4 HOH A 59 557 66 HOH HOH . 
G 4 HOH A 60 558 67 HOH HOH . 
G 4 HOH A 61 559 68 HOH HOH . 
G 4 HOH A 62 560 69 HOH HOH . 
G 4 HOH A 63 561 87 HOH HOH . 
G 4 HOH A 64 562 91 HOH HOH . 
G 4 HOH A 65 563 100 HOH HOH . 
G 4 HOH A 66 564 107 HOH HOH . 
G 4 HOH A 67 565 113 HOH HOH . 
G 4 HOH A 68 566 133 HOH HOH . 
G 4 HOH A 69 567 134 HOH HOH . 
H 4 HOH B 1 499 22 HOH HOH . 
H 4 HOH B 2 500 26 HOH HOH . 
H 4 HOH B 3 501 42 HOH HOH . 
H 4 HOH B 4 502 70 HOH HOH . 
H 4 HOH B 5 503 71 HOH HOH . 
H 4 HOH B 6 504 72 HOH HOH . 
H 4 HOH B 7 505 73 HOH HOH . 
H 4 HOH B 8 506 74 HOH HOH . 
H 4 HOH B 9 507 75 HOH HOH . 
H 4 HOH B 10 508 76 HOH HOH . 
H 4 HOH B 11 509 77 HOH HOH . 
H 4 HOH B 12 510 78 HOH HOH . 
H 4 HOH B 13 511 79 HOH HOH . 
H 4 HOH B 14 512 80 HOH HOH . 
H 4 HOH B 15 513 81 HOH HOH . 
H 4 HOH B 16 514 82 HOH HOH . 
H 4 HOH B 17 515 83 HOH HOH . 
H 4 HOH B 18 516 84 HOH HOH . 
H 4 HOH B 19 517 85 HOH HOH . 
H 4 HOH B 20 518 86 HOH HOH . 
H 4 HOH B 21 519 88 HOH HOH . 
H 4 HOH B 22 520 89 HOH HOH . 
H 4 HOH B 23 521 90 HOH HOH . 
H 4 HOH B 24 522 92 HOH HOH . 
H 4 HOH B 25 523 93 HOH HOH . 
H 4 HOH B 26 524 94 HOH HOH . 
H 4 HOH B 27 525 95 HOH HOH . 
H 4 HOH B 28 526 96 HOH HOH . 
H 4 HOH B 29 527 97 HOH HOH . 
H 4 HOH B 30 528 98 HOH HOH . 
H 4 HOH B 31 529 99 HOH HOH . 
H 4 HOH B 32 530 101 HOH HOH . 
H 4 HOH B 33 531 102 HOH HOH . 
H 4 HOH B 34 532 103 HOH HOH . 
H 4 HOH B 35 533 104 HOH HOH . 
H 4 HOH B 36 534 105 HOH HOH . 
H 4 HOH B 37 535 106 HOH HOH . 
H 4 HOH B 38 536 108 HOH HOH . 
H 4 HOH B 39 537 109 HOH HOH . 
H 4 HOH B 40 538 110 HOH HOH . 
H 4 HOH B 41 539 111 HOH HOH . 
H 4 HOH B 42 540 112 HOH HOH . 
H 4 HOH B 43 541 114 HOH HOH . 
H 4 HOH B 44 542 115 HOH HOH . 
H 4 HOH B 45 543 116 HOH HOH . 
H 4 HOH B 46 544 117 HOH HOH . 
H 4 HOH B 47 545 118 HOH HOH . 
H 4 HOH B 48 546 119 HOH HOH . 
H 4 HOH B 49 547 120 HOH HOH . 
H 4 HOH B 50 548 121 HOH HOH . 
H 4 HOH B 51 549 122 HOH HOH . 
H 4 HOH B 52 550 123 HOH HOH . 
H 4 HOH B 53 551 124 HOH HOH . 
H 4 HOH B 54 552 125 HOH HOH . 
H 4 HOH B 55 553 126 HOH HOH . 
H 4 HOH B 56 554 127 HOH HOH . 
H 4 HOH B 57 555 128 HOH HOH . 
H 4 HOH B 58 556 129 HOH HOH . 
H 4 HOH B 59 557 130 HOH HOH . 
H 4 HOH B 60 558 131 HOH HOH . 
H 4 HOH B 61 559 132 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               66.742 
_atom_site.Cartn_y               22.037 
_atom_site.Cartn_z               25.934 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        12.14 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           497 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    49 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#