data_1XV9 # _model_server_result.job_id XLSXBL7cGDjCyT3-0FkEBA _model_server_result.datetime_utc '2024-11-27 13:22:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1xv9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1003}' # _entry.id 1XV9 # _exptl.entry_id 1XV9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 242.397 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTADECANOIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1XV9 _cell.length_a 128.442 _cell.length_b 128.442 _cell.length_c 214.53 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XV9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,L,M,P 1 1 C,D,G,H,J,K,N,O,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 I N N ? 4 J N N # _chem_comp.formula 'C15 H30 O2' _chem_comp.formula_weight 242.397 _chem_comp.id F15 _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTADECANOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O2 F15 sing 141 n n C1 O3 F15 doub 142 n n C1 C4 F15 sing 143 n n O2 HO2 F15 sing 144 n n C4 C5 F15 sing 145 n n C4 H22 F15 sing 146 n n C4 H23 F15 sing 147 n n C5 C8 F15 sing 148 n n C5 H24 F15 sing 149 n n C5 H25 F15 sing 150 n n C6 C7 F15 sing 151 n n C6 C8 F15 sing 152 n n C6 H26 F15 sing 153 n n C6 H1 F15 sing 154 n n C7 C9 F15 sing 155 n n C7 H27 F15 sing 156 n n C7 H2 F15 sing 157 n n C8 H28 F15 sing 158 n n C8 H29 F15 sing 159 n n C9 C10 F15 sing 160 n n C9 H30 F15 sing 161 n n C9 H31 F15 sing 162 n n C10 C11 F15 sing 163 n n C10 H33 F15 sing 164 n n C10 H5 F15 sing 165 n n C11 C12 F15 sing 166 n n C11 H34 F15 sing 167 n n C11 H6 F15 sing 168 n n C12 C13 F15 sing 169 n n C12 H36 F15 sing 170 n n C12 H37 F15 sing 171 n n C13 C2 F15 sing 172 n n C13 H3 F15 sing 173 n n C13 H4 F15 sing 174 n n C2 C3 F15 sing 175 n n C2 H7 F15 sing 176 n n C2 H8 F15 sing 177 n n C3 C14 F15 sing 178 n n C3 H9 F15 sing 179 n n C3 H10 F15 sing 180 n n C14 C15 F15 sing 181 n n C14 H11 F15 sing 182 n n C14 H12 F15 sing 183 n n C15 H13 F15 sing 184 n n C15 H14 F15 sing 185 n n C15 H15 F15 sing 186 n n # _atom_sites.entry_id 1XV9 _atom_sites.fract_transf_matrix[1][1] 0.007786 _atom_sites.fract_transf_matrix[1][2] 0.004495 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00899 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004661 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 4 F15 A 1 1003 1 F15 FA . J 4 F15 C 1 1002 1 F15 FA . K 5 CI2 D 1 1001 1 CI2 CI2 . L 6 HOH A 1 6 6 HOH HOH . L 6 HOH A 2 9 9 HOH HOH . L 6 HOH A 3 10 10 HOH HOH . L 6 HOH A 4 13 13 HOH HOH . L 6 HOH A 5 15 15 HOH HOH . L 6 HOH A 6 16 16 HOH HOH . L 6 HOH A 7 19 19 HOH HOH . L 6 HOH A 8 20 20 HOH HOH . L 6 HOH A 9 36 36 HOH HOH . L 6 HOH A 10 39 39 HOH HOH . L 6 HOH A 11 43 43 HOH HOH . L 6 HOH A 12 46 46 HOH HOH . L 6 HOH A 13 54 54 HOH HOH . L 6 HOH A 14 58 58 HOH HOH . L 6 HOH A 15 69 69 HOH HOH . M 6 HOH B 1 4 4 HOH HOH . M 6 HOH B 2 5 5 HOH HOH . M 6 HOH B 3 14 14 HOH HOH . M 6 HOH B 4 17 17 HOH HOH . M 6 HOH B 5 18 18 HOH HOH . M 6 HOH B 6 21 21 HOH HOH . M 6 HOH B 7 37 37 HOH HOH . M 6 HOH B 8 38 38 HOH HOH . M 6 HOH B 9 40 40 HOH HOH . M 6 HOH B 10 41 41 HOH HOH . M 6 HOH B 11 53 53 HOH HOH . M 6 HOH B 12 56 56 HOH HOH . M 6 HOH B 13 61 61 HOH HOH . N 6 HOH C 1 3 3 HOH HOH . N 6 HOH C 2 8 8 HOH HOH . N 6 HOH C 3 22 22 HOH HOH . N 6 HOH C 4 26 26 HOH HOH . N 6 HOH C 5 28 28 HOH HOH . N 6 HOH C 6 29 29 HOH HOH . N 6 HOH C 7 32 32 HOH HOH . N 6 HOH C 8 33 33 HOH HOH . N 6 HOH C 9 35 35 HOH HOH . N 6 HOH C 10 44 44 HOH HOH . N 6 HOH C 11 47 47 HOH HOH . N 6 HOH C 12 55 55 HOH HOH . N 6 HOH C 13 62 62 HOH HOH . N 6 HOH C 14 66 66 HOH HOH . N 6 HOH C 15 68 68 HOH HOH . O 6 HOH D 1 1 1 HOH HOH . O 6 HOH D 2 2 2 HOH HOH . O 6 HOH D 3 7 7 HOH HOH . O 6 HOH D 4 12 12 HOH HOH . O 6 HOH D 5 24 24 HOH HOH . O 6 HOH D 6 27 27 HOH HOH . O 6 HOH D 7 30 30 HOH HOH . O 6 HOH D 8 31 31 HOH HOH . O 6 HOH D 9 34 34 HOH HOH . O 6 HOH D 10 42 42 HOH HOH . O 6 HOH D 11 45 45 HOH HOH . O 6 HOH D 12 49 49 HOH HOH . O 6 HOH D 13 50 50 HOH HOH . O 6 HOH D 14 52 52 HOH HOH . O 6 HOH D 15 59 59 HOH HOH . O 6 HOH D 16 60 60 HOH HOH . O 6 HOH D 17 64 64 HOH HOH . O 6 HOH D 18 65 65 HOH HOH . O 6 HOH D 19 67 67 HOH HOH . O 6 HOH D 20 70 70 HOH HOH . O 6 HOH D 21 71 71 HOH HOH . P 6 HOH E 1 25 25 HOH HOH . Q 6 HOH H 1 48 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 F15 . . . I 4 37.003 31.358 61.08 1 75.64 ? C1 F15 1003 A 1 HETATM 2 O O2 F15 . . . I 4 36.505 31.037 62.165 1 75.39 ? O2 F15 1003 A 1 HETATM 3 O O3 F15 . . . I 4 37.883 30.65 60.595 1 71.55 ? O3 F15 1003 A 1 HETATM 4 C C4 F15 . . . I 4 36.474 32.615 60.249 1 76.84 ? C4 F15 1003 A 1 HETATM 5 C C5 F15 . . . I 4 36.755 34.089 60.785 1 77.54 ? C5 F15 1003 A 1 HETATM 6 C C6 F15 . . . I 4 36.64 36.549 60.945 1 78.13 ? C6 F15 1003 A 1 HETATM 7 C C7 F15 . . . I 4 36.014 37.919 60.728 1 79.32 ? C7 F15 1003 A 1 HETATM 8 C C8 F15 . . . I 4 36.114 35.364 60.117 1 77.41 ? C8 F15 1003 A 1 HETATM 9 C C9 F15 . . . I 4 36.695 38.654 59.542 1 80.66 ? C9 F15 1003 A 1 HETATM 10 C C10 F15 . . . I 4 37.236 40.085 59.807 1 81.47 ? C10 F15 1003 A 1 HETATM 11 C C11 F15 . . . I 4 38.743 40.217 59.564 1 82.98 ? C11 F15 1003 A 1 HETATM 12 C C12 F15 . . . I 4 39.315 41.005 58.327 1 83.17 ? C12 F15 1003 A 1 HETATM 13 C C13 F15 . . . I 4 40.877 40.8 58.053 1 82.82 ? C13 F15 1003 A 1 HETATM 14 C C2 F15 . . . I 4 41.965 41.321 59.07 1 82.6 ? C2 F15 1003 A 1 HETATM 15 C C3 F15 . . . I 4 42.393 40.435 60.266 1 82.74 ? C3 F15 1003 A 1 HETATM 16 C C14 F15 . . . I 4 42.965 39.103 59.817 1 82.37 ? C14 F15 1003 A 1 HETATM 17 C C15 F15 . . . I 4 43.514 38.405 61.047 1 82.67 ? C15 F15 1003 A 1 HETATM 18 H H22 F15 . . . I 4 35.406 32.497 60.15 1 77.03 ? H22 F15 1003 A 1 HETATM 19 H H23 F15 . . . I 4 36.857 32.521 59.243 1 76.9 ? H23 F15 1003 A 1 HETATM 20 H H24 F15 . . . I 4 37.822 34.244 60.8 1 77.47 ? H24 F15 1003 A 1 HETATM 21 H H25 F15 . . . I 4 36.463 34.124 61.825 1 77.55 ? H25 F15 1003 A 1 HETATM 22 H H26 F15 . . . I 4 36.496 36.321 61.99 1 78.07 ? H26 F15 1003 A 1 HETATM 23 H H1 F15 . . . I 4 37.709 36.626 60.806 1 78.04 ? H1 F15 1003 A 1 HETATM 24 H H27 F15 . . . I 4 36.162 38.493 61.634 1 79.2 ? H27 F15 1003 A 1 HETATM 25 H H2 F15 . . . I 4 34.943 37.83 60.594 1 79.17 ? H2 F15 1003 A 1 HETATM 26 H H28 F15 . . . I 4 35.036 35.352 60.16 1 77.44 ? H28 F15 1003 A 1 HETATM 27 H H29 F15 . . . I 4 36.383 35.46 59.078 1 77.4 ? H29 F15 1003 A 1 HETATM 28 H H30 F15 . . . I 4 35.979 38.729 58.738 1 80.65 ? H30 F15 1003 A 1 HETATM 29 H H31 F15 . . . I 4 37.479 38.025 59.153 1 80.55 ? H31 F15 1003 A 1 HETATM 30 H H33 F15 . . . I 4 36.717 40.803 59.207 1 81.6 ? H33 F15 1003 A 1 HETATM 31 H H5 F15 . . . I 4 37.042 40.341 60.839 1 81.59 ? H5 F15 1003 A 1 HETATM 32 H H34 F15 . . . I 4 39.138 39.211 59.528 1 83.05 ? H34 F15 1003 A 1 HETATM 33 H H6 F15 . . . I 4 39.161 40.65 60.465 1 82.93 ? H6 F15 1003 A 1 HETATM 34 H H36 F15 . . . I 4 39.121 42.057 58.449 1 83.24 ? H36 F15 1003 A 1 HETATM 35 H H37 F15 . . . I 4 38.779 40.712 57.439 1 83.05 ? H37 F15 1003 A 1 HETATM 36 H H3 F15 . . . I 4 41.098 41.322 57.136 1 82.82 ? H3 F15 1003 A 1 HETATM 37 H H4 F15 . . . I 4 41.104 39.765 57.835 1 82.89 ? H4 F15 1003 A 1 HETATM 38 H H7 F15 . . . I 4 41.704 42.298 59.453 1 82.71 ? H7 F15 1003 A 1 HETATM 39 H H8 F15 . . . I 4 42.88 41.46 58.512 1 82.76 ? H8 F15 1003 A 1 HETATM 40 H H9 F15 . . . I 4 41.57 40.277 60.954 1 82.61 ? H9 F15 1003 A 1 HETATM 41 H H10 F15 . . . I 4 43.163 40.928 60.849 1 82.52 ? H10 F15 1003 A 1 HETATM 42 H H11 F15 . . . I 4 43.738 39.278 59.09 1 82.49 ? H11 F15 1003 A 1 HETATM 43 H H12 F15 . . . I 4 42.21 38.514 59.325 1 82.39 ? H12 F15 1003 A 1 HETATM 44 H H13 F15 . . . I 4 42.75 38.241 61.789 1 82.64 ? H13 F15 1003 A 1 HETATM 45 H H14 F15 . . . I 4 44.296 38.988 61.5 1 82.67 ? H14 F15 1003 A 1 HETATM 46 H H15 F15 . . . I 4 43.917 37.452 60.743 1 82.81 ? H15 F15 1003 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 35 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 46 #