data_1XXJ
#
_model_server_result.job_id            AHUBj3raaZCviYQ7--1meA 
_model_server_result.datetime_utc      '2024-10-16 10:30:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1xxj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":931}' 
#
_entry.id    1XXJ 
#
_exptl.entry_id    1XXJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.112 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            BENZENE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1XXJ 
_cell.length_a            126.245 
_cell.length_b            142.265 
_cell.length_c            81.322 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1XXJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             H 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C SAC 1 A SAC 1 1_555 A N ALA 2 A ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 B C SAC 1 B SAC 1 1_555 B N ALA 2 B ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale3 C C SAC 1 C SAC 1 1_555 C N ALA 2 C ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale4 D C SAC 1 D SAC 1 1_555 D N ALA 2 D ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
#
_chem_comp.formula           'C6 H6' 
_chem_comp.formula_weight    78.112 
_chem_comp.id                BNZ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              BENZENE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 BNZ doub 70 n y 
C1 C6 BNZ sing 71 n y 
C1 H1 BNZ sing 72 n n 
C2 C3 BNZ sing 73 n y 
C2 H2 BNZ sing 74 n n 
C3 C4 BNZ doub 75 n y 
C3 H3 BNZ sing 76 n n 
C4 C5 BNZ sing 77 n y 
C4 H4 BNZ sing 78 n n 
C5 C6 BNZ doub 79 n y 
C5 H5 BNZ sing 80 n n 
C6 H6 BNZ sing 81 n n 
#
_atom_sites.entry_id                     1XXJ 
_atom_sites.fract_transf_matrix[1][1]    0.007921 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007029 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012297 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 UNC A 1 999 999 UNC UNC . 
F 2 UNC B 1 1999 999 UNC UNC . 
G 2 UNC C 1 2999 999 UNC UNC . 
H 3 BNZ C 1 931 931 BNZ BNZ . 
I 2 UNC D 1 3999 999 UNC UNC . 
J 4 HOH A 1 1002 1002 HOH WAT . 
J 4 HOH A 2 1003 1003 HOH WAT . 
J 4 HOH A 3 1004 1004 HOH WAT . 
J 4 HOH A 4 1005 1005 HOH WAT . 
J 4 HOH A 5 1006 1006 HOH WAT . 
J 4 HOH A 6 1008 1008 HOH WAT . 
J 4 HOH A 7 1024 1024 HOH WAT . 
J 4 HOH A 8 1207 1207 HOH WAT . 
K 4 HOH B 1 1001 1001 HOH WAT . 
K 4 HOH B 2 1009 1009 HOH WAT . 
K 4 HOH B 3 1010 1010 HOH WAT . 
K 4 HOH B 4 1011 1011 HOH WAT . 
K 4 HOH B 5 1012 1012 HOH WAT . 
K 4 HOH B 6 1213 1213 HOH WAT . 
L 4 HOH C 1 1014 1014 HOH WAT . 
L 4 HOH C 2 1016 1016 HOH WAT . 
L 4 HOH C 3 1017 1017 HOH WAT . 
L 4 HOH C 4 1018 1018 HOH WAT . 
L 4 HOH C 5 1026 1026 HOH WAT . 
L 4 HOH C 6 1219 1219 HOH WAT . 
M 4 HOH D 1 1015 1015 HOH WAT . 
M 4 HOH D 2 1020 1020 HOH WAT . 
M 4 HOH D 3 1021 1021 HOH WAT . 
M 4 HOH D 4 1022 1022 HOH WAT . 
M 4 HOH D 5 1023 1023 HOH WAT . 
M 4 HOH D 6 1025 1025 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BNZ . . . H 3 63.556 69.857 17.65 0.5 41.19 ? C1 BNZ 931 C 1 
HETATM 2 C C2 BNZ . . . H 3 63.329 70.57 16.468 0.5 41.32 ? C2 BNZ 931 C 1 
HETATM 3 C C3 BNZ . . . H 3 62.87 71.888 16.526 0.5 41.46 ? C3 BNZ 931 C 1 
HETATM 4 C C4 BNZ . . . H 3 62.651 72.48 17.757 0.5 41.58 ? C4 BNZ 931 C 1 
HETATM 5 C C5 BNZ . . . H 3 62.838 71.753 18.927 0.5 41.62 ? C5 BNZ 931 C 1 
HETATM 6 C C6 BNZ . . . H 3 63.312 70.452 18.873 0.5 41.74 ? C6 BNZ 931 C 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           6 
#