data_1Y0R # _model_server_result.job_id 84-i15Tbb8XJNFvWjxgr5g _model_server_result.datetime_utc '2025-02-28 12:56:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1y0r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 1Y0R # _exptl.entry_id 1Y0R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1Y0R _cell.length_a 111.572 _cell.length_b 111.572 _cell.length_c 111.572 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Y0R _symmetry.cell_setting ? _symmetry.Int_Tables_number 195 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS dodecameric 12 author_and_software_defined_assembly 1 PISA trimeric 3 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1,2,3,4,5,6,7,8,9,10,11,12 A,B,C,D,E 2 1,7,10 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 6 'crystal symmetry operation' 6_555 z,-x,-y 0 0 1 -1 0 0 0 -1 0 0 0 0 7 'crystal symmetry operation' 7_555 -z,-x,y 0 0 -1 -1 0 0 0 1 0 0 0 0 8 'crystal symmetry operation' 8_555 -z,x,-y 0 0 -1 1 0 0 0 -1 0 0 0 0 9 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 10 'crystal symmetry operation' 10_555 -y,z,-x 0 -1 0 0 0 1 -1 0 0 0 0 0 11 'crystal symmetry operation' 11_555 y,-z,-x 0 1 0 0 0 -1 -1 0 0 0 0 0 12 'crystal symmetry operation' 12_555 -y,-z,x 0 -1 0 0 0 -1 1 0 0 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 68 A HIS 68 1_555 B ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc2 A OD1 ASP 182 A ASP 182 1_555 B ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? metalc ? metalc3 A OD2 ASP 182 A ASP 182 1_555 C ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc4 A OE2 GLU 213 A GLU 213 1_555 C ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc5 A OE1 GLU 213 A GLU 213 1_555 C ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc6 A OD2 ASP 235 A ASP 235 1_555 B ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc7 A OD1 ASP 235 A ASP 235 1_555 B ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc8 A NE2 HIS 323 A HIS 323 1_555 C ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc9 B ZN ZN . A ZN 1001 1_555 D AS ARS . A ARS 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.041 ? metalc ? metalc10 C ZN ZN . A ZN 1002 1_555 D AS ARS . A ARS 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.084 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1Y0R _atom_sites.fract_transf_matrix[1][1] 0.008963 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008963 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008963 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1001 1 ZN ZN2 . C 2 ZN A 1 1002 2 ZN ZN2 . D 3 ARS A 1 1003 3 ARS AS . E 4 HOH A 1 1004 1 HOH WAT . E 4 HOH A 2 1005 2 HOH WAT . E 4 HOH A 3 1006 3 HOH WAT . E 4 HOH A 4 1007 4 HOH WAT . E 4 HOH A 5 1008 5 HOH WAT . E 4 HOH A 6 1009 6 HOH WAT . E 4 HOH A 7 1010 7 HOH WAT . E 4 HOH A 8 1011 8 HOH WAT . E 4 HOH A 9 1012 9 HOH WAT . E 4 HOH A 10 1013 10 HOH WAT . E 4 HOH A 11 1014 11 HOH WAT . E 4 HOH A 12 1015 12 HOH WAT . E 4 HOH A 13 1016 13 HOH WAT . E 4 HOH A 14 1017 14 HOH WAT . E 4 HOH A 15 1018 15 HOH WAT . E 4 HOH A 16 1019 16 HOH WAT . E 4 HOH A 17 1020 17 HOH WAT . E 4 HOH A 18 1021 18 HOH WAT . E 4 HOH A 19 1022 19 HOH WAT . E 4 HOH A 20 1023 20 HOH WAT . E 4 HOH A 21 1024 21 HOH WAT . E 4 HOH A 22 1025 22 HOH WAT . E 4 HOH A 23 1026 23 HOH WAT . E 4 HOH A 24 1027 24 HOH WAT . E 4 HOH A 25 1028 25 HOH WAT . E 4 HOH A 26 1029 26 HOH WAT . E 4 HOH A 27 1030 27 HOH WAT . E 4 HOH A 28 1031 28 HOH WAT . E 4 HOH A 29 1032 29 HOH WAT . E 4 HOH A 30 1033 30 HOH WAT . E 4 HOH A 31 1034 31 HOH WAT . E 4 HOH A 32 1035 32 HOH WAT . E 4 HOH A 33 1036 33 HOH WAT . E 4 HOH A 34 1037 34 HOH WAT . E 4 HOH A 35 1038 35 HOH WAT . E 4 HOH A 36 1039 36 HOH WAT . E 4 HOH A 37 1040 37 HOH WAT . E 4 HOH A 38 1041 38 HOH WAT . E 4 HOH A 39 1042 39 HOH WAT . E 4 HOH A 40 1043 40 HOH WAT . E 4 HOH A 41 1044 41 HOH WAT . E 4 HOH A 42 1045 42 HOH WAT . E 4 HOH A 43 1046 43 HOH WAT . E 4 HOH A 44 1047 44 HOH WAT . E 4 HOH A 45 1048 45 HOH WAT . E 4 HOH A 46 1049 46 HOH WAT . E 4 HOH A 47 1050 47 HOH WAT . E 4 HOH A 48 1051 48 HOH WAT . E 4 HOH A 49 1052 49 HOH WAT . E 4 HOH A 50 1053 50 HOH WAT . E 4 HOH A 51 1054 51 HOH WAT . E 4 HOH A 52 1055 52 HOH WAT . E 4 HOH A 53 1056 53 HOH WAT . E 4 HOH A 54 1057 54 HOH WAT . E 4 HOH A 55 1058 55 HOH WAT . E 4 HOH A 56 1059 56 HOH WAT . E 4 HOH A 57 1060 57 HOH WAT . E 4 HOH A 58 1061 58 HOH WAT . E 4 HOH A 59 1062 59 HOH WAT . E 4 HOH A 60 1063 60 HOH WAT . E 4 HOH A 61 1064 61 HOH WAT . E 4 HOH A 62 1065 62 HOH WAT . E 4 HOH A 63 1066 63 HOH WAT . E 4 HOH A 64 1067 64 HOH WAT . E 4 HOH A 65 1068 65 HOH WAT . E 4 HOH A 66 1069 66 HOH WAT . E 4 HOH A 67 1070 67 HOH WAT . E 4 HOH A 68 1071 68 HOH WAT . E 4 HOH A 69 1072 69 HOH WAT . E 4 HOH A 70 1073 70 HOH WAT . E 4 HOH A 71 1074 71 HOH WAT . E 4 HOH A 72 1075 72 HOH WAT . E 4 HOH A 73 1076 73 HOH WAT . E 4 HOH A 74 1077 74 HOH WAT . E 4 HOH A 75 1078 75 HOH WAT . E 4 HOH A 76 1079 76 HOH WAT . E 4 HOH A 77 1080 77 HOH WAT . E 4 HOH A 78 1081 78 HOH WAT . E 4 HOH A 79 1082 79 HOH WAT . E 4 HOH A 80 1083 80 HOH WAT . E 4 HOH A 81 1084 81 HOH WAT . E 4 HOH A 82 1085 82 HOH WAT . E 4 HOH A 83 1086 83 HOH WAT . E 4 HOH A 84 1087 84 HOH WAT . E 4 HOH A 85 1088 85 HOH WAT . E 4 HOH A 86 1089 86 HOH WAT . E 4 HOH A 87 1090 87 HOH WAT . E 4 HOH A 88 1091 88 HOH WAT . E 4 HOH A 89 1092 89 HOH WAT . E 4 HOH A 90 1093 90 HOH WAT . E 4 HOH A 91 1094 91 HOH WAT . E 4 HOH A 92 1095 92 HOH WAT . E 4 HOH A 93 1096 93 HOH WAT . E 4 HOH A 94 1097 94 HOH WAT . E 4 HOH A 95 1098 95 HOH WAT . E 4 HOH A 96 1099 96 HOH WAT . E 4 HOH A 97 1100 97 HOH WAT . E 4 HOH A 98 1101 98 HOH WAT . E 4 HOH A 99 1102 99 HOH WAT . E 4 HOH A 100 1103 100 HOH WAT . E 4 HOH A 101 1104 101 HOH WAT . E 4 HOH A 102 1105 102 HOH WAT . E 4 HOH A 103 1106 103 HOH WAT . E 4 HOH A 104 1107 104 HOH WAT . E 4 HOH A 105 1108 105 HOH WAT . E 4 HOH A 106 1109 107 HOH WAT . E 4 HOH A 107 1110 108 HOH WAT . E 4 HOH A 108 1111 109 HOH WAT . E 4 HOH A 109 1112 110 HOH WAT . E 4 HOH A 110 1113 111 HOH WAT . E 4 HOH A 111 1114 112 HOH WAT . E 4 HOH A 112 1115 113 HOH WAT . E 4 HOH A 113 1116 114 HOH WAT . E 4 HOH A 114 1117 115 HOH WAT . E 4 HOH A 115 1118 116 HOH WAT . E 4 HOH A 116 1119 117 HOH WAT . E 4 HOH A 117 1120 118 HOH WAT . E 4 HOH A 118 1121 119 HOH WAT . E 4 HOH A 119 1122 120 HOH WAT . E 4 HOH A 120 1123 121 HOH WAT . E 4 HOH A 121 1124 123 HOH WAT . E 4 HOH A 122 1125 124 HOH WAT . E 4 HOH A 123 1126 125 HOH WAT . E 4 HOH A 124 1127 126 HOH WAT . E 4 HOH A 125 1128 128 HOH WAT . E 4 HOH A 126 1129 129 HOH WAT . E 4 HOH A 127 1130 130 HOH WAT . E 4 HOH A 128 1131 131 HOH WAT . E 4 HOH A 129 1132 132 HOH WAT . E 4 HOH A 130 1133 133 HOH WAT . E 4 HOH A 131 1134 134 HOH WAT . E 4 HOH A 132 1135 135 HOH WAT . E 4 HOH A 133 1136 136 HOH WAT . E 4 HOH A 134 1137 137 HOH WAT . E 4 HOH A 135 1138 138 HOH WAT . E 4 HOH A 136 1139 139 HOH WAT . E 4 HOH A 137 1140 140 HOH WAT . E 4 HOH A 138 1141 142 HOH WAT . E 4 HOH A 139 1142 143 HOH WAT . E 4 HOH A 140 1143 144 HOH WAT . E 4 HOH A 141 1144 145 HOH WAT . E 4 HOH A 142 1145 146 HOH WAT . E 4 HOH A 143 1146 147 HOH WAT . E 4 HOH A 144 1147 148 HOH WAT . E 4 HOH A 145 1148 149 HOH WAT . E 4 HOH A 146 1149 150 HOH WAT . E 4 HOH A 147 1150 151 HOH WAT . E 4 HOH A 148 1151 152 HOH WAT . E 4 HOH A 149 1152 153 HOH WAT . E 4 HOH A 150 1153 154 HOH WAT . E 4 HOH A 151 1154 155 HOH WAT . E 4 HOH A 152 1155 156 HOH WAT . E 4 HOH A 153 1156 157 HOH WAT . E 4 HOH A 154 1157 158 HOH WAT . E 4 HOH A 155 1158 160 HOH WAT . E 4 HOH A 156 1159 161 HOH WAT . E 4 HOH A 157 1160 162 HOH WAT . E 4 HOH A 158 1161 163 HOH WAT . E 4 HOH A 159 1162 166 HOH WAT . E 4 HOH A 160 1163 172 HOH WAT . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -9.451 _atom_site.Cartn_y 18.793 _atom_site.Cartn_z 34.415 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 33.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #