data_1Y0X
#
_model_server_result.job_id            NhbSU0VQbGcjrx7DEnVNpA 
_model_server_result.datetime_utc      '2025-02-05 07:48:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1y0x 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    1Y0X 
#
_exptl.entry_id    1Y0X 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              136.989 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CACODYLATE ION' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1Y0X 
_cell.length_a            68.79 
_cell.length_b            68.79 
_cell.length_c            130.4 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1Y0X 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA,PQS dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I 1 1 
A,B,C,D,E,F,G,H,I 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 6_766 -x+2,-x+y+1,-z+4/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 103.185 59.573888 173.866667 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 114 X CYS 294 1_555 B AS CAC . X CAC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? 
metalc ? metalc2 A SG CYS 118 X CYS 298 1_555 C AS CAC . X CAC 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.628 ? 
metalc ? metalc3 A SG CYS 208 X CYS 388 1_555 E AS CAC . X CAC 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.73 ? 
metalc ? metalc4 A NH2 ARG 211 X ARG 391 1_555 E AS CAC . X CAC 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? 
metalc ? metalc5 A SG CYS 254 X CYS 434 1_555 F AS CAC . X CAC 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? 
metalc ? metalc6 A SG CYS 254 X CYS 434 6_766 G AS CAC . X CAC 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.834 ? 
#
_chem_comp.formula           'C2 H6 As O2 -1' 
_chem_comp.formula_weight    136.989 
_chem_comp.id                CAC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CACODYLATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     dimethylarsinate 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
AS O1 CAC doub 70 n n 
AS O2 CAC sing 71 n n 
AS C1 CAC sing 72 n n 
AS C2 CAC sing 73 n n 
C1 H11 CAC sing 74 n n 
C1 H12 CAC sing 75 n n 
C1 H13 CAC sing 76 n n 
C2 H21 CAC sing 77 n n 
C2 H22 CAC sing 78 n n 
C2 H23 CAC sing 79 n n 
#
_atom_sites.entry_id                     1Y0X 
_atom_sites.fract_transf_matrix[1][1]    0.0145 
_atom_sites.fract_transf_matrix[1][2]    0.0084 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.0168 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0077 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CAC X 1 501 501 CAC CAC . 
C 2 CAC X 1 502 502 CAC CAC . 
D 2 CAC X 1 503 503 CAC CAC . 
E 2 CAC X 1 504 504 CAC CAC . 
F 2 CAC X 1 505 505 CAC CAC . 
G 2 CAC X 1 506 506 CAC CAC . 
H 3 T44 X 1 500 500 T44 T44 . 
I 4 HOH X 1 1 1 HOH HOH . 
I 4 HOH X 2 2 2 HOH HOH . 
I 4 HOH X 3 3 3 HOH HOH . 
I 4 HOH X 4 4 4 HOH HOH . 
I 4 HOH X 5 5 5 HOH HOH . 
I 4 HOH X 6 6 6 HOH HOH . 
I 4 HOH X 7 7 7 HOH HOH . 
I 4 HOH X 8 8 8 HOH HOH . 
I 4 HOH X 9 9 9 HOH HOH . 
I 4 HOH X 10 10 10 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           AS 
_atom_site.label_atom_id         AS 
_atom_site.label_comp_id         CAC 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               32.987 
_atom_site.Cartn_y               14.681 
_atom_site.Cartn_z               97.063 
_atom_site.occupancy             0.28 
_atom_site.B_iso_or_equiv        174.36 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          AS 
_atom_site.auth_comp_id          CAC 
_atom_site.auth_seq_id           503 
_atom_site.auth_asym_id          X 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#