data_1Y1O
#
_model_server_result.job_id            0hDCxQsDoFqTHT9OQNmASA 
_model_server_result.datetime_utc      '2024-10-18 16:32:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1y1o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":307}' 
#
_entry.id    1Y1O 
#
_exptl.entry_id    1Y1O 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    11 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1Y1O 
_cell.length_a            80.261 
_cell.length_b            81.018 
_cell.length_c            106.279 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1Y1O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C MSE 34 A MSE 31 1_555 A N THR 35 A THR 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale2 A C HIS 124 A HIS 121 1_555 A N MSE 125 A MSE 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale3 A C MSE 125 A MSE 122 1_555 A N GLU 126 A GLU 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
metalc ? metalc1 G NI NI . A NI 321 1_555 A OE2 GLU 174 A GLU 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
metalc ? metalc2 G NI NI . A NI 321 1_555 A ND1 HIS 178 A HIS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? 
metalc ? metalc3 G NI NI . A NI 321 1_555 R O HOH . A HOH 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? 
metalc ? metalc4 G NI NI . A NI 321 1_555 A ND1 HIS 154 A HIS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
covale ? covale4 B C MSE 34 B MSE 31 1_555 B N THR 35 B THR 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale5 B C HIS 124 B HIS 121 1_555 B N MSE 125 B MSE 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale6 B C MSE 125 B MSE 122 1_555 B N GLU 126 B GLU 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale7 C C MSE 34 C MSE 31 1_555 C N THR 35 C THR 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale8 C C HIS 124 C HIS 121 1_555 C N MSE 125 C MSE 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale9 C C MSE 125 C MSE 122 1_555 C N GLU 126 C GLU 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
metalc ? metalc5 N NI NI . C NI 322 1_555 T O HOH . C HOH 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? 
metalc ? metalc6 N NI NI . C NI 322 1_555 C OE2 GLU 174 C GLU 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? 
metalc ? metalc7 N NI NI . C NI 322 1_555 C ND1 HIS 154 C HIS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? 
metalc ? metalc8 N NI NI . C NI 322 1_555 C ND1 HIS 178 C HIS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? 
covale ? covale10 D C MSE 34 D MSE 31 1_555 D N THR 35 D THR 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale11 D C HIS 124 D HIS 121 1_555 D N MSE 125 D MSE 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale12 D C MSE 125 D MSE 122 1_555 D N GLU 126 D GLU 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1Y1O 
_atom_sites.fract_transf_matrix[1][1]    0.012459 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012343 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009409 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SO4 A 1 301 301 SO4 SO4 . 
F 2 SO4 A 1 302 302 SO4 SO4 . 
G 3 NI A 1 321 321 NI NI . 
H 2 SO4 B 1 303 303 SO4 SO4 . 
I 2 SO4 B 1 304 304 SO4 SO4 . 
J 2 SO4 B 1 305 305 SO4 SO4 . 
K 2 SO4 B 1 306 306 SO4 SO4 . 
L 2 SO4 C 1 307 307 SO4 SO4 . 
M 2 SO4 C 1 308 308 SO4 SO4 . 
N 3 NI C 1 322 322 NI NI . 
O 2 SO4 D 1 309 309 SO4 SO4 . 
P 2 SO4 D 1 310 310 SO4 SO4 . 
Q 2 SO4 D 1 311 311 SO4 SO4 . 
R 4 HOH A 1 322 4 HOH HOH . 
R 4 HOH A 2 323 7 HOH HOH . 
R 4 HOH A 3 324 9 HOH HOH . 
R 4 HOH A 4 325 10 HOH HOH . 
R 4 HOH A 5 326 11 HOH HOH . 
R 4 HOH A 6 327 13 HOH HOH . 
R 4 HOH A 7 328 14 HOH HOH . 
R 4 HOH A 8 329 17 HOH HOH . 
R 4 HOH A 9 330 18 HOH HOH . 
R 4 HOH A 10 331 19 HOH HOH . 
R 4 HOH A 11 332 20 HOH HOH . 
R 4 HOH A 12 333 21 HOH HOH . 
R 4 HOH A 13 334 24 HOH HOH . 
R 4 HOH A 14 335 26 HOH HOH . 
R 4 HOH A 15 336 29 HOH HOH . 
R 4 HOH A 16 337 33 HOH HOH . 
R 4 HOH A 17 338 35 HOH HOH . 
R 4 HOH A 18 339 38 HOH HOH . 
R 4 HOH A 19 340 41 HOH HOH . 
R 4 HOH A 20 341 48 HOH HOH . 
R 4 HOH A 21 342 80 HOH HOH . 
R 4 HOH A 22 343 89 HOH HOH . 
R 4 HOH A 23 344 103 HOH HOH . 
R 4 HOH A 24 345 105 HOH HOH . 
R 4 HOH A 25 346 108 HOH HOH . 
R 4 HOH A 26 347 127 HOH HOH . 
R 4 HOH A 27 348 128 HOH HOH . 
R 4 HOH A 28 349 131 HOH HOH . 
R 4 HOH A 29 350 133 HOH HOH . 
R 4 HOH A 30 351 135 HOH HOH . 
R 4 HOH A 31 352 140 HOH HOH . 
S 4 HOH B 1 307 2 HOH HOH . 
S 4 HOH B 2 308 5 HOH HOH . 
S 4 HOH B 3 309 15 HOH HOH . 
S 4 HOH B 4 310 22 HOH HOH . 
S 4 HOH B 5 311 23 HOH HOH . 
S 4 HOH B 6 312 25 HOH HOH . 
S 4 HOH B 7 313 27 HOH HOH . 
S 4 HOH B 8 314 28 HOH HOH . 
S 4 HOH B 9 315 30 HOH HOH . 
S 4 HOH B 10 316 31 HOH HOH . 
S 4 HOH B 11 317 34 HOH HOH . 
S 4 HOH B 12 318 36 HOH HOH . 
S 4 HOH B 13 319 39 HOH HOH . 
S 4 HOH B 14 320 40 HOH HOH . 
S 4 HOH B 15 321 46 HOH HOH . 
S 4 HOH B 16 322 79 HOH HOH . 
S 4 HOH B 17 323 86 HOH HOH . 
S 4 HOH B 18 324 88 HOH HOH . 
S 4 HOH B 19 325 91 HOH HOH . 
S 4 HOH B 20 326 95 HOH HOH . 
S 4 HOH B 21 327 96 HOH HOH . 
S 4 HOH B 22 328 98 HOH HOH . 
S 4 HOH B 23 329 99 HOH HOH . 
S 4 HOH B 24 330 101 HOH HOH . 
S 4 HOH B 25 331 102 HOH HOH . 
S 4 HOH B 26 332 104 HOH HOH . 
S 4 HOH B 27 333 106 HOH HOH . 
S 4 HOH B 28 334 112 HOH HOH . 
S 4 HOH B 29 335 115 HOH HOH . 
S 4 HOH B 30 336 117 HOH HOH . 
S 4 HOH B 31 337 121 HOH HOH . 
S 4 HOH B 32 338 123 HOH HOH . 
S 4 HOH B 33 339 125 HOH HOH . 
S 4 HOH B 34 340 138 HOH HOH . 
S 4 HOH B 35 341 141 HOH HOH . 
S 4 HOH B 36 342 142 HOH HOH . 
S 4 HOH B 37 343 144 HOH HOH . 
T 4 HOH C 1 323 6 HOH HOH . 
T 4 HOH C 2 324 12 HOH HOH . 
T 4 HOH C 3 325 16 HOH HOH . 
T 4 HOH C 4 326 32 HOH HOH . 
T 4 HOH C 5 327 37 HOH HOH . 
T 4 HOH C 6 328 43 HOH HOH . 
T 4 HOH C 7 329 44 HOH HOH . 
T 4 HOH C 8 330 47 HOH HOH . 
T 4 HOH C 9 331 49 HOH HOH . 
T 4 HOH C 10 332 50 HOH HOH . 
T 4 HOH C 11 333 51 HOH HOH . 
T 4 HOH C 12 334 52 HOH HOH . 
T 4 HOH C 13 335 53 HOH HOH . 
T 4 HOH C 14 336 54 HOH HOH . 
T 4 HOH C 15 337 55 HOH HOH . 
T 4 HOH C 16 338 56 HOH HOH . 
T 4 HOH C 17 339 59 HOH HOH . 
T 4 HOH C 18 340 60 HOH HOH . 
T 4 HOH C 19 341 61 HOH HOH . 
T 4 HOH C 20 342 62 HOH HOH . 
T 4 HOH C 21 343 65 HOH HOH . 
T 4 HOH C 22 344 68 HOH HOH . 
T 4 HOH C 23 345 71 HOH HOH . 
T 4 HOH C 24 346 74 HOH HOH . 
T 4 HOH C 25 347 76 HOH HOH . 
T 4 HOH C 26 348 77 HOH HOH . 
T 4 HOH C 27 349 82 HOH HOH . 
T 4 HOH C 28 350 84 HOH HOH . 
T 4 HOH C 29 351 85 HOH HOH . 
T 4 HOH C 30 352 87 HOH HOH . 
T 4 HOH C 31 353 92 HOH HOH . 
T 4 HOH C 32 354 93 HOH HOH . 
T 4 HOH C 33 355 94 HOH HOH . 
T 4 HOH C 34 356 100 HOH HOH . 
T 4 HOH C 35 357 107 HOH HOH . 
T 4 HOH C 36 358 109 HOH HOH . 
T 4 HOH C 37 359 110 HOH HOH . 
T 4 HOH C 38 360 116 HOH HOH . 
T 4 HOH C 39 361 119 HOH HOH . 
T 4 HOH C 40 362 120 HOH HOH . 
T 4 HOH C 41 363 126 HOH HOH . 
T 4 HOH C 42 364 132 HOH HOH . 
T 4 HOH C 43 365 134 HOH HOH . 
T 4 HOH C 44 366 137 HOH HOH . 
T 4 HOH C 45 367 139 HOH HOH . 
U 4 HOH D 1 312 1 HOH HOH . 
U 4 HOH D 2 313 3 HOH HOH . 
U 4 HOH D 3 314 8 HOH HOH . 
U 4 HOH D 4 315 42 HOH HOH . 
U 4 HOH D 5 316 45 HOH HOH . 
U 4 HOH D 6 317 57 HOH HOH . 
U 4 HOH D 7 318 58 HOH HOH . 
U 4 HOH D 8 319 63 HOH HOH . 
U 4 HOH D 9 320 64 HOH HOH . 
U 4 HOH D 10 321 66 HOH HOH . 
U 4 HOH D 11 322 67 HOH HOH . 
U 4 HOH D 12 323 69 HOH HOH . 
U 4 HOH D 13 324 70 HOH HOH . 
U 4 HOH D 14 325 72 HOH HOH . 
U 4 HOH D 15 326 73 HOH HOH . 
U 4 HOH D 16 327 75 HOH HOH . 
U 4 HOH D 17 328 78 HOH HOH . 
U 4 HOH D 18 329 81 HOH HOH . 
U 4 HOH D 19 330 83 HOH HOH . 
U 4 HOH D 20 331 90 HOH HOH . 
U 4 HOH D 21 332 97 HOH HOH . 
U 4 HOH D 22 333 111 HOH HOH . 
U 4 HOH D 23 334 113 HOH HOH . 
U 4 HOH D 24 335 114 HOH HOH . 
U 4 HOH D 25 336 118 HOH HOH . 
U 4 HOH D 26 337 122 HOH HOH . 
U 4 HOH D 27 338 124 HOH HOH . 
U 4 HOH D 28 339 129 HOH HOH . 
U 4 HOH D 29 340 130 HOH HOH . 
U 4 HOH D 30 341 136 HOH HOH . 
U 4 HOH D 31 342 143 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . L 2 22.862 65.457 18.622 1 54.68 ? S SO4 307 C 1 
HETATM 2 O O1 SO4 . . . L 2 23.347 64.066 18.704 1 52.67 ? O1 SO4 307 C 1 
HETATM 3 O O2 SO4 . . . L 2 23.822 66.336 19.297 1 54.41 ? O2 SO4 307 C 1 
HETATM 4 O O3 SO4 . . . L 2 22.75 65.882 17.222 1 51.81 ? O3 SO4 307 C 1 
HETATM 5 O O4 SO4 . . . L 2 21.57 65.59 19.302 1 53.32 ? O4 SO4 307 C 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           5 
#