data_1Y21
#
_model_server_result.job_id            oqu8u9-3Ic-nBoq901-jcA 
_model_server_result.datetime_utc      '2024-12-21 14:21:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1y21 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":296}' 
#
_entry.id    1Y21 
#
_exptl.entry_id    1Y21 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              30.006 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NITRIC OXIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.55 
_cell.angle_gamma         90 
_cell.entry_id            1Y21 
_cell.length_a            48.065 
_cell.length_b            41.477 
_cell.length_c            65.346 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1Y21 
_symmetry.cell_setting             monoclinic 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 60 A CYS 60 1_555 B N NO . A NO 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.709 ? 
metalc ? metalc1 C N NO . A NO 298 1_555 D FE HEM . A HEM 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? 
metalc ? metalc2 C O NO . A NO 298 1_555 D FE HEM . A HEM 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? 
#
_chem_comp.formula           'N O' 
_chem_comp.formula_weight    30.006 
_chem_comp.id                NO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NITRIC OXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'Nitrogen monoxide' 
#
_chem_comp_bond.atom_id_1             N 
_chem_comp_bond.atom_id_2             O 
_chem_comp_bond.comp_id               NO 
_chem_comp_bond.value_order           doub 
_chem_comp_bond.pdbx_ordinal          319 
_chem_comp_bond.pdbx_stereo_config    n 
_chem_comp_bond.pdbx_aromatic_flag    n 
#
_atom_sites.entry_id                     1Y21 
_atom_sites.fract_transf_matrix[1][1]    0.020805 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001656 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02411 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015352 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NO A 1 296 296 NO NMO . 
C 2 NO A 1 298 298 NO NMO . 
D 3 HEM A 1 300 300 HEM HEM . 
E 4 TRS A 1 301 301 TRS TRS . 
F 5 HOH A 1 302 302 HOH HOH . 
F 5 HOH A 2 303 303 HOH HOH . 
F 5 HOH A 3 304 304 HOH HOH . 
F 5 HOH A 4 305 305 HOH HOH . 
F 5 HOH A 5 306 306 HOH HOH . 
F 5 HOH A 6 307 307 HOH HOH . 
F 5 HOH A 7 308 308 HOH HOH . 
F 5 HOH A 8 309 309 HOH HOH . 
F 5 HOH A 9 310 310 HOH HOH . 
F 5 HOH A 10 311 311 HOH HOH . 
F 5 HOH A 11 312 312 HOH HOH . 
F 5 HOH A 12 313 313 HOH HOH . 
F 5 HOH A 13 314 314 HOH HOH . 
F 5 HOH A 14 315 315 HOH HOH . 
F 5 HOH A 15 316 316 HOH HOH . 
F 5 HOH A 16 317 317 HOH HOH . 
F 5 HOH A 17 318 318 HOH HOH . 
F 5 HOH A 18 319 319 HOH HOH . 
F 5 HOH A 19 320 320 HOH HOH . 
F 5 HOH A 20 321 321 HOH HOH . 
F 5 HOH A 21 323 323 HOH HOH . 
F 5 HOH A 22 324 324 HOH HOH . 
F 5 HOH A 23 325 325 HOH HOH . 
F 5 HOH A 24 326 326 HOH HOH . 
F 5 HOH A 25 327 327 HOH HOH . 
F 5 HOH A 26 328 328 HOH HOH . 
F 5 HOH A 27 329 329 HOH HOH . 
F 5 HOH A 28 330 330 HOH HOH . 
F 5 HOH A 29 331 331 HOH HOH . 
F 5 HOH A 30 332 332 HOH HOH . 
F 5 HOH A 31 333 333 HOH HOH . 
F 5 HOH A 32 334 334 HOH HOH . 
F 5 HOH A 33 335 335 HOH HOH . 
F 5 HOH A 34 336 336 HOH HOH . 
F 5 HOH A 35 337 337 HOH HOH . 
F 5 HOH A 36 338 338 HOH HOH . 
F 5 HOH A 37 339 339 HOH HOH . 
F 5 HOH A 38 340 340 HOH HOH . 
F 5 HOH A 39 341 341 HOH HOH . 
F 5 HOH A 40 342 342 HOH HOH . 
F 5 HOH A 41 343 343 HOH HOH . 
F 5 HOH A 42 344 344 HOH HOH . 
F 5 HOH A 43 346 346 HOH HOH . 
F 5 HOH A 44 347 347 HOH HOH . 
F 5 HOH A 45 348 348 HOH HOH . 
F 5 HOH A 46 349 349 HOH HOH . 
F 5 HOH A 47 350 350 HOH HOH . 
F 5 HOH A 48 351 351 HOH HOH . 
F 5 HOH A 49 352 352 HOH HOH . 
F 5 HOH A 50 353 353 HOH HOH . 
F 5 HOH A 51 354 354 HOH HOH . 
F 5 HOH A 52 355 355 HOH HOH . 
F 5 HOH A 53 356 356 HOH HOH . 
F 5 HOH A 54 357 357 HOH HOH . 
F 5 HOH A 55 358 358 HOH HOH . 
F 5 HOH A 56 359 359 HOH HOH . 
F 5 HOH A 57 360 360 HOH HOH . 
F 5 HOH A 58 361 361 HOH HOH . 
F 5 HOH A 59 362 362 HOH HOH . 
F 5 HOH A 60 363 363 HOH HOH . 
F 5 HOH A 61 364 364 HOH HOH . 
F 5 HOH A 62 365 365 HOH HOH . 
F 5 HOH A 63 366 366 HOH HOH . 
F 5 HOH A 64 367 367 HOH HOH . 
F 5 HOH A 65 368 368 HOH HOH . 
F 5 HOH A 66 369 369 HOH HOH . 
F 5 HOH A 67 370 370 HOH HOH . 
F 5 HOH A 68 371 371 HOH HOH . 
F 5 HOH A 69 372 372 HOH HOH . 
F 5 HOH A 70 373 373 HOH HOH . 
F 5 HOH A 71 374 374 HOH HOH . 
F 5 HOH A 72 375 375 HOH HOH . 
F 5 HOH A 73 376 376 HOH HOH . 
F 5 HOH A 74 377 377 HOH HOH . 
F 5 HOH A 75 378 378 HOH HOH . 
F 5 HOH A 76 379 379 HOH HOH . 
F 5 HOH A 77 380 380 HOH HOH . 
F 5 HOH A 78 381 381 HOH HOH . 
F 5 HOH A 79 382 382 HOH HOH . 
F 5 HOH A 80 383 383 HOH HOH . 
F 5 HOH A 81 384 384 HOH HOH . 
F 5 HOH A 82 385 385 HOH HOH . 
F 5 HOH A 83 386 386 HOH HOH . 
F 5 HOH A 84 387 387 HOH HOH . 
F 5 HOH A 85 388 388 HOH HOH . 
F 5 HOH A 86 389 389 HOH HOH . 
F 5 HOH A 87 390 390 HOH HOH . 
F 5 HOH A 88 391 391 HOH HOH . 
F 5 HOH A 89 392 392 HOH HOH . 
F 5 HOH A 90 393 393 HOH HOH . 
F 5 HOH A 91 394 394 HOH HOH . 
F 5 HOH A 92 395 395 HOH HOH . 
F 5 HOH A 93 396 396 HOH HOH . 
F 5 HOH A 94 397 397 HOH HOH . 
F 5 HOH A 95 398 398 HOH HOH . 
F 5 HOH A 96 399 399 HOH HOH . 
F 5 HOH A 97 400 400 HOH HOH . 
F 5 HOH A 98 401 401 HOH HOH . 
F 5 HOH A 99 402 402 HOH HOH . 
F 5 HOH A 100 403 403 HOH HOH . 
F 5 HOH A 101 404 404 HOH HOH . 
F 5 HOH A 102 405 405 HOH HOH . 
F 5 HOH A 103 406 406 HOH HOH . 
F 5 HOH A 104 407 407 HOH HOH . 
F 5 HOH A 105 408 408 HOH HOH . 
F 5 HOH A 106 409 409 HOH HOH . 
F 5 HOH A 107 410 410 HOH HOH . 
F 5 HOH A 108 411 411 HOH HOH . 
F 5 HOH A 109 412 412 HOH HOH . 
F 5 HOH A 110 413 413 HOH HOH . 
F 5 HOH A 111 414 414 HOH HOH . 
F 5 HOH A 112 415 415 HOH HOH . 
F 5 HOH A 113 416 416 HOH HOH . 
F 5 HOH A 114 417 417 HOH HOH . 
F 5 HOH A 115 418 418 HOH HOH . 
F 5 HOH A 116 419 419 HOH HOH . 
F 5 HOH A 117 420 420 HOH HOH . 
F 5 HOH A 118 421 421 HOH HOH . 
F 5 HOH A 119 422 422 HOH HOH . 
F 5 HOH A 120 423 423 HOH HOH . 
F 5 HOH A 121 424 424 HOH HOH . 
F 5 HOH A 122 425 425 HOH HOH . 
F 5 HOH A 123 426 426 HOH HOH . 
F 5 HOH A 124 427 427 HOH HOH . 
F 5 HOH A 125 428 428 HOH HOH . 
F 5 HOH A 126 429 429 HOH HOH . 
F 5 HOH A 127 430 430 HOH HOH . 
F 5 HOH A 128 431 431 HOH HOH . 
F 5 HOH A 129 432 432 HOH HOH . 
F 5 HOH A 130 433 433 HOH HOH . 
F 5 HOH A 131 434 434 HOH HOH . 
F 5 HOH A 132 435 435 HOH HOH . 
F 5 HOH A 133 436 436 HOH HOH . 
F 5 HOH A 134 437 437 HOH HOH . 
F 5 HOH A 135 438 438 HOH HOH . 
F 5 HOH A 136 439 439 HOH HOH . 
F 5 HOH A 137 440 440 HOH HOH . 
F 5 HOH A 138 441 441 HOH HOH . 
F 5 HOH A 139 442 442 HOH HOH . 
F 5 HOH A 140 443 443 HOH HOH . 
F 5 HOH A 141 444 444 HOH HOH . 
F 5 HOH A 142 445 445 HOH HOH . 
F 5 HOH A 143 446 446 HOH HOH . 
F 5 HOH A 144 447 447 HOH HOH . 
F 5 HOH A 145 448 448 HOH HOH . 
F 5 HOH A 146 449 449 HOH HOH . 
F 5 HOH A 147 450 450 HOH HOH . 
F 5 HOH A 148 451 451 HOH HOH . 
F 5 HOH A 149 452 452 HOH HOH . 
F 5 HOH A 150 453 453 HOH HOH . 
F 5 HOH A 151 454 454 HOH HOH . 
F 5 HOH A 152 455 455 HOH HOH . 
F 5 HOH A 153 456 456 HOH HOH . 
F 5 HOH A 154 458 458 HOH HOH . 
F 5 HOH A 155 459 459 HOH HOH . 
F 5 HOH A 156 460 460 HOH HOH . 
F 5 HOH A 157 461 461 HOH HOH . 
F 5 HOH A 158 462 462 HOH HOH . 
F 5 HOH A 159 463 463 HOH HOH . 
F 5 HOH A 160 464 464 HOH HOH . 
F 5 HOH A 161 465 465 HOH HOH . 
F 5 HOH A 162 466 466 HOH HOH . 
F 5 HOH A 163 467 467 HOH HOH . 
F 5 HOH A 164 468 468 HOH HOH . 
F 5 HOH A 165 469 469 HOH HOH . 
F 5 HOH A 166 470 470 HOH HOH . 
F 5 HOH A 167 471 471 HOH HOH . 
F 5 HOH A 168 472 472 HOH HOH . 
F 5 HOH A 169 473 473 HOH HOH . 
F 5 HOH A 170 474 474 HOH HOH . 
F 5 HOH A 171 475 475 HOH HOH . 
F 5 HOH A 172 476 476 HOH HOH . 
F 5 HOH A 173 477 477 HOH HOH . 
F 5 HOH A 174 478 478 HOH HOH . 
F 5 HOH A 175 479 479 HOH HOH . 
F 5 HOH A 176 480 480 HOH HOH . 
F 5 HOH A 177 481 481 HOH HOH . 
F 5 HOH A 178 482 482 HOH HOH . 
F 5 HOH A 179 483 483 HOH HOH . 
F 5 HOH A 180 484 484 HOH HOH . 
F 5 HOH A 181 485 485 HOH HOH . 
F 5 HOH A 182 486 486 HOH HOH . 
F 5 HOH A 183 487 487 HOH HOH . 
F 5 HOH A 184 488 488 HOH HOH . 
F 5 HOH A 185 489 489 HOH HOH . 
F 5 HOH A 186 491 491 HOH HOH . 
F 5 HOH A 187 492 492 HOH HOH . 
F 5 HOH A 188 493 493 HOH HOH . 
F 5 HOH A 189 494 494 HOH HOH . 
F 5 HOH A 190 496 496 HOH HOH . 
F 5 HOH A 191 497 497 HOH HOH . 
F 5 HOH A 192 498 498 HOH HOH . 
F 5 HOH A 193 499 499 HOH HOH . 
F 5 HOH A 194 500 500 HOH HOH . 
F 5 HOH A 195 501 501 HOH HOH . 
F 5 HOH A 196 502 502 HOH HOH . 
F 5 HOH A 197 503 503 HOH HOH . 
F 5 HOH A 198 504 504 HOH HOH . 
F 5 HOH A 199 505 505 HOH HOH . 
F 5 HOH A 200 506 506 HOH HOH . 
F 5 HOH A 201 507 507 HOH HOH . 
F 5 HOH A 202 508 508 HOH HOH . 
F 5 HOH A 203 509 509 HOH HOH . 
F 5 HOH A 204 510 510 HOH HOH . 
F 5 HOH A 205 511 511 HOH HOH . 
F 5 HOH A 206 512 512 HOH HOH . 
F 5 HOH A 207 513 513 HOH HOH . 
F 5 HOH A 208 514 514 HOH HOH . 
F 5 HOH A 209 515 515 HOH HOH . 
F 5 HOH A 210 516 516 HOH HOH . 
F 5 HOH A 211 517 517 HOH HOH . 
F 5 HOH A 212 518 518 HOH HOH . 
F 5 HOH A 213 519 519 HOH HOH . 
F 5 HOH A 214 520 520 HOH HOH . 
F 5 HOH A 215 521 521 HOH HOH . 
F 5 HOH A 216 522 522 HOH HOH . 
F 5 HOH A 217 523 523 HOH HOH . 
F 5 HOH A 218 524 524 HOH HOH . 
F 5 HOH A 219 525 525 HOH HOH . 
F 5 HOH A 220 526 526 HOH HOH . 
F 5 HOH A 221 527 527 HOH HOH . 
F 5 HOH A 222 528 528 HOH HOH . 
F 5 HOH A 223 529 529 HOH HOH . 
F 5 HOH A 224 530 530 HOH HOH . 
F 5 HOH A 225 531 531 HOH HOH . 
F 5 HOH A 226 532 532 HOH HOH . 
F 5 HOH A 227 533 533 HOH HOH . 
F 5 HOH A 228 534 534 HOH HOH . 
F 5 HOH A 229 535 535 HOH HOH . 
F 5 HOH A 230 536 536 HOH HOH . 
F 5 HOH A 231 537 537 HOH HOH . 
F 5 HOH A 232 538 538 HOH HOH . 
F 5 HOH A 233 539 539 HOH HOH . 
F 5 HOH A 234 540 540 HOH HOH . 
F 5 HOH A 235 541 541 HOH HOH . 
F 5 HOH A 236 542 542 HOH HOH . 
F 5 HOH A 237 543 543 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N NO . . . B 2 9.883 15.886 2.76 1 51.03 ? N NO 296 A 1 
HETATM 2 O O NO . . . B 2 8.712 15.514 2.687 1 51.42 ? O NO 296 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           323 
_model_server_stats.encode_time_ms          33 
_model_server_stats.element_count           2 
#