data_1Y3V
#
_model_server_result.job_id            fYZxooNwTfhRNmVMOupOIA 
_model_server_result.datetime_utc      '2024-11-06 03:17:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1y3v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":3394}' 
#
_entry.id    1Y3V 
#
_exptl.entry_id    1Y3V 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1Y3V 
_cell.length_a            63.17 
_cell.length_b            69.17 
_cell.length_c            63.97 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1Y3V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? 
disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
metalc ? metalc1 A OE1 GLU 52 A GLU 70 1_555 B CA CA . A CA 3394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
metalc ? metalc2 A O ASN 54 A ASN 72 1_555 B CA CA . A CA 3394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc3 A O VAL 57 A VAL 75 1_555 B CA CA . A CA 3394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? 
metalc ? metalc4 A OE2 GLU 62 A GLU 80 1_555 B CA CA . A CA 3394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? 
metalc ? metalc5 B CA CA . A CA 3394 1_555 D O HOH . A HOH 3398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? 
metalc ? metalc6 B CA CA . A CA 3394 1_555 D O HOH . A HOH 3408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1Y3V 
_atom_sites.fract_transf_matrix[1][1]    0.01583 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014457 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015632 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 3394 3394 CA CA . 
C 3 UIR A 1 1994 1994 UIR UIR . 
D 4 HOH A 1 3395 1 HOH HOH . 
D 4 HOH A 2 3396 2 HOH HOH . 
D 4 HOH A 3 3397 3 HOH HOH . 
D 4 HOH A 4 3398 4 HOH HOH . 
D 4 HOH A 5 3399 5 HOH HOH . 
D 4 HOH A 6 3400 6 HOH HOH . 
D 4 HOH A 7 3401 7 HOH HOH . 
D 4 HOH A 8 3402 8 HOH HOH . 
D 4 HOH A 9 3403 9 HOH HOH . 
D 4 HOH A 10 3404 10 HOH HOH . 
D 4 HOH A 11 3405 11 HOH HOH . 
D 4 HOH A 12 3406 12 HOH HOH . 
D 4 HOH A 13 3407 13 HOH HOH . 
D 4 HOH A 14 3408 14 HOH HOH . 
D 4 HOH A 15 3409 15 HOH HOH . 
D 4 HOH A 16 3410 16 HOH HOH . 
D 4 HOH A 17 3411 17 HOH HOH . 
D 4 HOH A 18 3412 18 HOH HOH . 
D 4 HOH A 19 3413 19 HOH HOH . 
D 4 HOH A 20 3414 20 HOH HOH . 
D 4 HOH A 21 3415 21 HOH HOH . 
D 4 HOH A 22 3416 22 HOH HOH . 
D 4 HOH A 23 3417 23 HOH HOH . 
D 4 HOH A 24 3418 24 HOH HOH . 
D 4 HOH A 25 3419 25 HOH HOH . 
D 4 HOH A 26 3420 26 HOH HOH . 
D 4 HOH A 27 3421 27 HOH HOH . 
D 4 HOH A 28 3422 28 HOH HOH . 
D 4 HOH A 29 3423 29 HOH HOH . 
D 4 HOH A 30 3424 30 HOH HOH . 
D 4 HOH A 31 3425 31 HOH HOH . 
D 4 HOH A 32 3426 32 HOH HOH . 
D 4 HOH A 33 3427 33 HOH HOH . 
D 4 HOH A 34 3428 34 HOH HOH . 
D 4 HOH A 35 3429 35 HOH HOH . 
D 4 HOH A 36 3430 36 HOH HOH . 
D 4 HOH A 37 3431 37 HOH HOH . 
D 4 HOH A 38 3432 38 HOH HOH . 
D 4 HOH A 39 3433 39 HOH HOH . 
D 4 HOH A 40 3434 40 HOH HOH . 
D 4 HOH A 41 3435 41 HOH HOH . 
D 4 HOH A 42 3436 42 HOH HOH . 
D 4 HOH A 43 3437 43 HOH HOH . 
D 4 HOH A 44 3438 44 HOH HOH . 
D 4 HOH A 45 3439 45 HOH HOH . 
D 4 HOH A 46 3440 46 HOH HOH . 
D 4 HOH A 47 3441 47 HOH HOH . 
D 4 HOH A 48 3442 48 HOH HOH . 
D 4 HOH A 49 3443 49 HOH HOH . 
D 4 HOH A 50 3444 50 HOH HOH . 
D 4 HOH A 51 3445 51 HOH HOH . 
D 4 HOH A 52 3446 52 HOH HOH . 
D 4 HOH A 53 3447 53 HOH HOH . 
D 4 HOH A 54 3448 54 HOH HOH . 
D 4 HOH A 55 3449 55 HOH HOH . 
D 4 HOH A 56 3450 56 HOH HOH . 
D 4 HOH A 57 3451 57 HOH HOH . 
D 4 HOH A 58 3452 58 HOH HOH . 
D 4 HOH A 59 3453 59 HOH HOH . 
D 4 HOH A 60 3454 60 HOH HOH . 
D 4 HOH A 61 3455 61 HOH HOH . 
D 4 HOH A 62 3456 62 HOH HOH . 
D 4 HOH A 63 3457 63 HOH HOH . 
D 4 HOH A 64 3458 64 HOH HOH . 
D 4 HOH A 65 3459 65 HOH HOH . 
D 4 HOH A 66 3460 66 HOH HOH . 
D 4 HOH A 67 3461 67 HOH HOH . 
D 4 HOH A 68 3462 68 HOH HOH . 
D 4 HOH A 69 3463 69 HOH HOH . 
D 4 HOH A 70 3464 70 HOH HOH . 
D 4 HOH A 71 3465 71 HOH HOH . 
D 4 HOH A 72 3466 72 HOH HOH . 
D 4 HOH A 73 3467 73 HOH HOH . 
D 4 HOH A 74 3468 74 HOH HOH . 
D 4 HOH A 75 3469 75 HOH HOH . 
D 4 HOH A 76 3470 76 HOH HOH . 
D 4 HOH A 77 3471 77 HOH HOH . 
D 4 HOH A 78 3472 78 HOH HOH . 
D 4 HOH A 79 3473 79 HOH HOH . 
D 4 HOH A 80 3474 80 HOH HOH . 
D 4 HOH A 81 3475 81 HOH HOH . 
D 4 HOH A 82 3476 82 HOH HOH . 
D 4 HOH A 83 3477 83 HOH HOH . 
D 4 HOH A 84 3478 84 HOH HOH . 
D 4 HOH A 85 3479 85 HOH HOH . 
D 4 HOH A 86 3480 86 HOH HOH . 
D 4 HOH A 87 3481 87 HOH HOH . 
D 4 HOH A 88 3482 88 HOH HOH . 
D 4 HOH A 89 3483 89 HOH HOH . 
D 4 HOH A 90 3484 90 HOH HOH . 
D 4 HOH A 91 3485 91 HOH HOH . 
D 4 HOH A 92 3486 92 HOH HOH . 
D 4 HOH A 93 3487 93 HOH HOH . 
D 4 HOH A 94 3488 94 HOH HOH . 
D 4 HOH A 95 3489 95 HOH HOH . 
D 4 HOH A 96 3490 96 HOH HOH . 
D 4 HOH A 97 3491 97 HOH HOH . 
D 4 HOH A 98 3492 98 HOH HOH . 
D 4 HOH A 99 3493 99 HOH HOH . 
D 4 HOH A 100 3494 100 HOH HOH . 
D 4 HOH A 101 3495 101 HOH HOH . 
D 4 HOH A 102 3496 102 HOH HOH . 
D 4 HOH A 103 3497 103 HOH HOH . 
D 4 HOH A 104 3498 104 HOH HOH . 
D 4 HOH A 105 3499 105 HOH HOH . 
D 4 HOH A 106 3500 106 HOH HOH . 
D 4 HOH A 107 3501 107 HOH HOH . 
D 4 HOH A 108 3502 108 HOH HOH . 
D 4 HOH A 109 3503 109 HOH HOH . 
D 4 HOH A 110 3504 110 HOH HOH . 
D 4 HOH A 111 3505 111 HOH HOH . 
D 4 HOH A 112 3506 112 HOH HOH . 
D 4 HOH A 113 3507 113 HOH HOH . 
D 4 HOH A 114 3508 114 HOH HOH . 
D 4 HOH A 115 3509 115 HOH HOH . 
D 4 HOH A 116 3510 116 HOH HOH . 
D 4 HOH A 117 3511 117 HOH HOH . 
D 4 HOH A 118 3512 118 HOH HOH . 
D 4 HOH A 119 3513 119 HOH HOH . 
D 4 HOH A 120 3514 120 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               7.12 
_atom_site.Cartn_y               -0.424 
_atom_site.Cartn_z               -0.32 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        16.08 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           3394 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#