data_1Y4L # _model_server_result.job_id pEA4sehF9cl07aIl1rfgHg _model_server_result.datetime_utc '2024-10-20 00:31:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1y4l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":501}' # _entry.id 1Y4L # _exptl.entry_id 1Y4L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.095 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ISOPROPYL ALCOHOL' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1Y4L _cell.length_a 49.199 _cell.length_b 64.037 _cell.length_c 85.99 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Y4L _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 H N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 27 1_555 A SG CYS 115 A CYS 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 A SG CYS 28 A CYS 29 1_555 A SG CYS 44 A CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 A SG CYS 43 A CYS 44 1_555 A SG CYS 95 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf4 A SG CYS 49 A CYS 50 1_555 A SG CYS 121 A CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf5 A SG CYS 50 A CYS 51 1_555 A SG CYS 88 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf6 A SG CYS 57 A CYS 61 1_555 A SG CYS 81 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf7 A SG CYS 75 A CYS 84 1_555 A SG CYS 86 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf8 B SG CYS 26 B CYS 27 1_555 B SG CYS 115 B CYS 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? disulf ? disulf9 B SG CYS 28 B CYS 29 1_555 B SG CYS 44 B CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf10 B SG CYS 43 B CYS 44 1_555 B SG CYS 95 B CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf11 B SG CYS 49 B CYS 50 1_555 B SG CYS 121 B CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf12 B SG CYS 50 B CYS 51 1_555 B SG CYS 88 B CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? disulf ? disulf13 B SG CYS 57 B CYS 61 1_555 B SG CYS 81 B CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf14 B SG CYS 75 B CYS 84 1_555 B SG CYS 86 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? # _chem_comp.formula 'C3 H8 O' _chem_comp.formula_weight 60.095 _chem_comp.id IPA _chem_comp.mon_nstd_flag . _chem_comp.name 'ISOPROPYL ALCOHOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2-PROPANOL # _atom_sites.entry_id 1Y4L _atom_sites.fract_transf_matrix[1][1] 0.020326 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015616 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011629 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 P33 A 1 401 1 P33 P3K . D 3 IPA A 1 503 3 IPA IPA . E 3 IPA A 1 504 4 IPA IPA . F 4 SVR B 1 301 1 SVR SUR . G 2 P33 B 1 402 2 P33 P3K . H 3 IPA B 1 501 1 IPA IPA . I 3 IPA B 1 502 2 IPA IPA . J 3 IPA B 1 505 5 IPA IPA . K 5 HOH A 1 505 1 HOH HOH . K 5 HOH A 2 506 3 HOH HOH . K 5 HOH A 3 507 4 HOH HOH . K 5 HOH A 4 508 8 HOH HOH . K 5 HOH A 5 509 11 HOH HOH . K 5 HOH A 6 510 13 HOH HOH . K 5 HOH A 7 511 14 HOH HOH . K 5 HOH A 8 512 15 HOH HOH . K 5 HOH A 9 513 16 HOH HOH . K 5 HOH A 10 514 20 HOH HOH . K 5 HOH A 11 515 21 HOH HOH . K 5 HOH A 12 516 23 HOH HOH . K 5 HOH A 13 517 32 HOH HOH . K 5 HOH A 14 518 33 HOH HOH . K 5 HOH A 15 519 34 HOH HOH . K 5 HOH A 16 520 40 HOH HOH . K 5 HOH A 17 521 42 HOH HOH . K 5 HOH A 18 522 44 HOH HOH . K 5 HOH A 19 523 46 HOH HOH . K 5 HOH A 20 524 48 HOH HOH . K 5 HOH A 21 525 49 HOH HOH . K 5 HOH A 22 526 50 HOH HOH . K 5 HOH A 23 527 51 HOH HOH . K 5 HOH A 24 528 52 HOH HOH . K 5 HOH A 25 529 56 HOH HOH . K 5 HOH A 26 530 58 HOH HOH . K 5 HOH A 27 531 59 HOH HOH . K 5 HOH A 28 532 62 HOH HOH . K 5 HOH A 29 533 63 HOH HOH . K 5 HOH A 30 534 69 HOH HOH . K 5 HOH A 31 535 70 HOH HOH . K 5 HOH A 32 536 76 HOH HOH . K 5 HOH A 33 537 80 HOH HOH . K 5 HOH A 34 538 81 HOH HOH . K 5 HOH A 35 539 82 HOH HOH . K 5 HOH A 36 540 83 HOH HOH . K 5 HOH A 37 541 85 HOH HOH . K 5 HOH A 38 542 95 HOH HOH . K 5 HOH A 39 543 96 HOH HOH . K 5 HOH A 40 544 97 HOH HOH . K 5 HOH A 41 545 98 HOH HOH . K 5 HOH A 42 546 99 HOH HOH . K 5 HOH A 43 547 100 HOH HOH . K 5 HOH A 44 548 101 HOH HOH . K 5 HOH A 45 549 104 HOH HOH . K 5 HOH A 46 550 105 HOH HOH . K 5 HOH A 47 551 108 HOH HOH . K 5 HOH A 48 552 109 HOH HOH . K 5 HOH A 49 553 114 HOH HOH . K 5 HOH A 50 554 120 HOH HOH . K 5 HOH A 51 555 129 HOH HOH . K 5 HOH A 52 556 132 HOH HOH . K 5 HOH A 53 557 133 HOH HOH . K 5 HOH A 54 558 134 HOH HOH . K 5 HOH A 55 559 136 HOH HOH . K 5 HOH A 56 560 138 HOH HOH . K 5 HOH A 57 561 139 HOH HOH . K 5 HOH A 58 562 141 HOH HOH . K 5 HOH A 59 563 144 HOH HOH . K 5 HOH A 60 564 146 HOH HOH . K 5 HOH A 61 565 147 HOH HOH . K 5 HOH A 62 566 148 HOH HOH . K 5 HOH A 63 567 150 HOH HOH . K 5 HOH A 64 568 151 HOH HOH . K 5 HOH A 65 569 152 HOH HOH . K 5 HOH A 66 570 153 HOH HOH . K 5 HOH A 67 571 155 HOH HOH . K 5 HOH A 68 572 156 HOH HOH . K 5 HOH A 69 573 157 HOH HOH . K 5 HOH A 70 574 158 HOH HOH . K 5 HOH A 71 575 165 HOH HOH . K 5 HOH A 72 576 168 HOH HOH . K 5 HOH A 73 577 170 HOH HOH . K 5 HOH A 74 578 171 HOH HOH . K 5 HOH A 75 579 172 HOH HOH . K 5 HOH A 76 580 173 HOH HOH . K 5 HOH A 77 581 174 HOH HOH . K 5 HOH A 78 582 175 HOH HOH . K 5 HOH A 79 583 179 HOH HOH . K 5 HOH A 80 584 181 HOH HOH . K 5 HOH A 81 585 182 HOH HOH . K 5 HOH A 82 586 183 HOH HOH . K 5 HOH A 83 587 184 HOH HOH . K 5 HOH A 84 588 185 HOH HOH . K 5 HOH A 85 589 186 HOH HOH . K 5 HOH A 86 590 187 HOH HOH . K 5 HOH A 87 591 188 HOH HOH . K 5 HOH A 88 592 189 HOH HOH . K 5 HOH A 89 593 190 HOH HOH . K 5 HOH A 90 594 191 HOH HOH . K 5 HOH A 91 595 192 HOH HOH . K 5 HOH A 92 596 194 HOH HOH . K 5 HOH A 93 597 195 HOH HOH . K 5 HOH A 94 598 196 HOH HOH . K 5 HOH A 95 599 197 HOH HOH . K 5 HOH A 96 600 198 HOH HOH . K 5 HOH A 97 601 199 HOH HOH . K 5 HOH A 98 602 200 HOH HOH . L 5 HOH B 1 506 5 HOH HOH . L 5 HOH B 2 507 6 HOH HOH . L 5 HOH B 3 508 7 HOH HOH . L 5 HOH B 4 509 12 HOH HOH . L 5 HOH B 5 510 17 HOH HOH . L 5 HOH B 6 511 18 HOH HOH . L 5 HOH B 7 512 19 HOH HOH . L 5 HOH B 8 513 22 HOH HOH . L 5 HOH B 9 514 25 HOH HOH . L 5 HOH B 10 515 26 HOH HOH . L 5 HOH B 11 516 27 HOH HOH . L 5 HOH B 12 517 28 HOH HOH . L 5 HOH B 13 518 29 HOH HOH . L 5 HOH B 14 519 30 HOH HOH . L 5 HOH B 15 520 31 HOH HOH . L 5 HOH B 16 521 35 HOH HOH . L 5 HOH B 17 522 36 HOH HOH . L 5 HOH B 18 523 38 HOH HOH . L 5 HOH B 19 524 41 HOH HOH . L 5 HOH B 20 525 43 HOH HOH . L 5 HOH B 21 526 45 HOH HOH . L 5 HOH B 22 527 53 HOH HOH . L 5 HOH B 23 528 55 HOH HOH . L 5 HOH B 24 529 60 HOH HOH . L 5 HOH B 25 530 64 HOH HOH . L 5 HOH B 26 531 65 HOH HOH . L 5 HOH B 27 532 67 HOH HOH . L 5 HOH B 28 533 68 HOH HOH . L 5 HOH B 29 534 71 HOH HOH . L 5 HOH B 30 535 74 HOH HOH . L 5 HOH B 31 536 75 HOH HOH . L 5 HOH B 32 537 78 HOH HOH . L 5 HOH B 33 538 79 HOH HOH . L 5 HOH B 34 539 84 HOH HOH . L 5 HOH B 35 540 88 HOH HOH . L 5 HOH B 36 541 91 HOH HOH . L 5 HOH B 37 542 93 HOH HOH . L 5 HOH B 38 543 94 HOH HOH . L 5 HOH B 39 544 102 HOH HOH . L 5 HOH B 40 545 106 HOH HOH . L 5 HOH B 41 546 110 HOH HOH . L 5 HOH B 42 547 111 HOH HOH . L 5 HOH B 43 548 115 HOH HOH . L 5 HOH B 44 549 116 HOH HOH . L 5 HOH B 45 550 117 HOH HOH . L 5 HOH B 46 551 123 HOH HOH . L 5 HOH B 47 552 125 HOH HOH . L 5 HOH B 48 553 126 HOH HOH . L 5 HOH B 49 554 130 HOH HOH . L 5 HOH B 50 555 131 HOH HOH . L 5 HOH B 51 556 140 HOH HOH . L 5 HOH B 52 557 145 HOH HOH . L 5 HOH B 53 558 149 HOH HOH . L 5 HOH B 54 559 159 HOH HOH . L 5 HOH B 55 560 160 HOH HOH . L 5 HOH B 56 561 161 HOH HOH . L 5 HOH B 57 562 167 HOH HOH . L 5 HOH B 58 563 177 HOH HOH . L 5 HOH B 59 564 178 HOH HOH . L 5 HOH B 60 565 180 HOH HOH . L 5 HOH B 61 566 193 HOH HOH . L 5 HOH B 62 567 201 HOH HOH . L 5 HOH B 63 568 202 HOH HOH . L 5 HOH B 64 569 203 HOH HOH . L 5 HOH B 65 570 204 HOH HOH . L 5 HOH B 66 571 205 HOH HOH . L 5 HOH B 67 572 206 HOH HOH . L 5 HOH B 68 573 207 HOH HOH . L 5 HOH B 69 574 208 HOH HOH . L 5 HOH B 70 575 209 HOH HOH . L 5 HOH B 71 576 210 HOH HOH . L 5 HOH B 72 577 211 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IPA . . . H 3 2.751 10.366 -10.337 1 35.09 ? C1 IPA 501 B 1 HETATM 2 C C2 IPA . . . H 3 2.347 11.336 -9.229 1 36.15 ? C2 IPA 501 B 1 HETATM 3 C C3 IPA . . . H 3 3.25 12.569 -9.268 1 34.79 ? C3 IPA 501 B 1 HETATM 4 O O2 IPA . . . H 3 2.441 10.696 -7.967 1 32.94 ? O2 IPA 501 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #