data_1Y7L # _model_server_result.job_id 7KnEMkX1pa0TCJGUvwtzKA _model_server_result.datetime_utc '2024-12-26 21:59:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1y7l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":6000}' # _entry.id 1Y7L # _exptl.entry_id 1Y7L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1Y7L _cell.length_a 112.569 _cell.length_b 112.569 _cell.length_c 45.799 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Y7L _symmetry.cell_setting tetragonal _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 41 A VAL 41 1_555 A N LLP 42 A LLP 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C LLP 42 A LLP 42 1_555 A N CYS 43 A CYS 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 337 n n S O2 SO4 doub 338 n n S O3 SO4 sing 339 n n S O4 SO4 sing 340 n n # _atom_sites.entry_id 1Y7L _atom_sites.fract_transf_matrix[1][1] 0.008883 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008883 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021835 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 6000 6000 SO4 SO4 . D 4 HOH A 1 6001 1 HOH HOH . D 4 HOH A 2 6002 2 HOH HOH . D 4 HOH A 3 6003 3 HOH HOH . D 4 HOH A 4 6004 4 HOH HOH . D 4 HOH A 5 6005 5 HOH HOH . D 4 HOH A 6 6006 6 HOH HOH . D 4 HOH A 7 6007 7 HOH HOH . D 4 HOH A 8 6008 8 HOH HOH . D 4 HOH A 9 6009 9 HOH HOH . D 4 HOH A 10 6010 10 HOH HOH . D 4 HOH A 11 6011 11 HOH HOH . D 4 HOH A 12 6012 12 HOH HOH . D 4 HOH A 13 6013 13 HOH HOH . D 4 HOH A 14 6014 14 HOH HOH . D 4 HOH A 15 6015 15 HOH HOH . D 4 HOH A 16 6016 16 HOH HOH . D 4 HOH A 17 6017 17 HOH HOH . D 4 HOH A 18 6018 18 HOH HOH . D 4 HOH A 19 6019 19 HOH HOH . D 4 HOH A 20 6020 20 HOH HOH . D 4 HOH A 21 6021 21 HOH HOH . D 4 HOH A 22 6022 22 HOH HOH . D 4 HOH A 23 6023 23 HOH HOH . D 4 HOH A 24 6024 24 HOH HOH . D 4 HOH A 25 6025 25 HOH HOH . D 4 HOH A 26 6026 26 HOH HOH . D 4 HOH A 27 6027 27 HOH HOH . D 4 HOH A 28 6028 29 HOH HOH . D 4 HOH A 29 6029 30 HOH HOH . D 4 HOH A 30 6030 31 HOH HOH . D 4 HOH A 31 6031 32 HOH HOH . D 4 HOH A 32 6032 33 HOH HOH . D 4 HOH A 33 6033 34 HOH HOH . D 4 HOH A 34 6034 35 HOH HOH . D 4 HOH A 35 6035 36 HOH HOH . D 4 HOH A 36 6036 37 HOH HOH . D 4 HOH A 37 6037 38 HOH HOH . D 4 HOH A 38 6038 39 HOH HOH . D 4 HOH A 39 6039 40 HOH HOH . D 4 HOH A 40 6040 41 HOH HOH . D 4 HOH A 41 6041 42 HOH HOH . D 4 HOH A 42 6042 43 HOH HOH . D 4 HOH A 43 6043 44 HOH HOH . D 4 HOH A 44 6044 45 HOH HOH . D 4 HOH A 45 6045 46 HOH HOH . D 4 HOH A 46 6046 47 HOH HOH . D 4 HOH A 47 6047 48 HOH HOH . D 4 HOH A 48 6048 49 HOH HOH . D 4 HOH A 49 6049 50 HOH HOH . D 4 HOH A 50 6050 51 HOH HOH . D 4 HOH A 51 6051 52 HOH HOH . D 4 HOH A 52 6052 53 HOH HOH . D 4 HOH A 53 6053 54 HOH HOH . D 4 HOH A 54 6054 55 HOH HOH . D 4 HOH A 55 6055 56 HOH HOH . D 4 HOH A 56 6056 57 HOH HOH . D 4 HOH A 57 6057 58 HOH HOH . D 4 HOH A 58 6058 59 HOH HOH . D 4 HOH A 59 6059 60 HOH HOH . D 4 HOH A 60 6060 61 HOH HOH . D 4 HOH A 61 6061 62 HOH HOH . D 4 HOH A 62 6062 63 HOH HOH . D 4 HOH A 63 6063 64 HOH HOH . D 4 HOH A 64 6064 65 HOH HOH . D 4 HOH A 65 6065 66 HOH HOH . D 4 HOH A 66 6066 67 HOH HOH . D 4 HOH A 67 6067 68 HOH HOH . D 4 HOH A 68 6068 69 HOH HOH . D 4 HOH A 69 6069 70 HOH HOH . D 4 HOH A 70 6070 71 HOH HOH . D 4 HOH A 71 6071 72 HOH HOH . D 4 HOH A 72 6072 73 HOH HOH . D 4 HOH A 73 6073 74 HOH HOH . D 4 HOH A 74 6074 75 HOH HOH . D 4 HOH A 75 6075 76 HOH HOH . D 4 HOH A 76 6076 77 HOH HOH . D 4 HOH A 77 6077 78 HOH HOH . D 4 HOH A 78 6078 79 HOH HOH . D 4 HOH A 79 6079 80 HOH HOH . D 4 HOH A 80 6080 81 HOH HOH . D 4 HOH A 81 6081 82 HOH HOH . D 4 HOH A 82 6082 83 HOH HOH . D 4 HOH A 83 6083 84 HOH HOH . D 4 HOH A 84 6084 85 HOH HOH . D 4 HOH A 85 6085 86 HOH HOH . D 4 HOH A 86 6086 87 HOH HOH . D 4 HOH A 87 6087 88 HOH HOH . D 4 HOH A 88 6088 89 HOH HOH . D 4 HOH A 89 6089 90 HOH HOH . D 4 HOH A 90 6090 91 HOH HOH . D 4 HOH A 91 6091 92 HOH HOH . D 4 HOH A 92 6092 93 HOH HOH . D 4 HOH A 93 6093 94 HOH HOH . D 4 HOH A 94 6094 95 HOH HOH . D 4 HOH A 95 6095 96 HOH HOH . D 4 HOH A 96 6096 97 HOH HOH . D 4 HOH A 97 6097 98 HOH HOH . D 4 HOH A 98 6098 99 HOH HOH . D 4 HOH A 99 6099 100 HOH HOH . D 4 HOH A 100 6100 101 HOH HOH . D 4 HOH A 101 6101 102 HOH HOH . D 4 HOH A 102 6102 103 HOH HOH . D 4 HOH A 103 6103 104 HOH HOH . D 4 HOH A 104 6104 105 HOH HOH . D 4 HOH A 105 6105 106 HOH HOH . D 4 HOH A 106 6106 107 HOH HOH . D 4 HOH A 107 6107 108 HOH HOH . D 4 HOH A 108 6108 109 HOH HOH . D 4 HOH A 109 6109 110 HOH HOH . D 4 HOH A 110 6110 111 HOH HOH . D 4 HOH A 111 6111 112 HOH HOH . D 4 HOH A 112 6112 113 HOH HOH . D 4 HOH A 113 6113 114 HOH HOH . D 4 HOH A 114 6114 115 HOH HOH . D 4 HOH A 115 6115 116 HOH HOH . D 4 HOH A 116 6116 117 HOH HOH . D 4 HOH A 117 6117 118 HOH HOH . D 4 HOH A 118 6118 119 HOH HOH . D 4 HOH A 119 6119 120 HOH HOH . D 4 HOH A 120 6120 121 HOH HOH . D 4 HOH A 121 6121 122 HOH HOH . D 4 HOH A 122 6122 123 HOH HOH . D 4 HOH A 123 6123 124 HOH HOH . D 4 HOH A 124 6124 125 HOH HOH . D 4 HOH A 125 6125 126 HOH HOH . D 4 HOH A 126 6126 127 HOH HOH . D 4 HOH A 127 6127 128 HOH HOH . D 4 HOH A 128 6128 129 HOH HOH . D 4 HOH A 129 6129 130 HOH HOH . D 4 HOH A 130 6130 131 HOH HOH . D 4 HOH A 131 6131 132 HOH HOH . D 4 HOH A 132 6132 133 HOH HOH . D 4 HOH A 133 6133 134 HOH HOH . D 4 HOH A 134 6134 135 HOH HOH . D 4 HOH A 135 6135 136 HOH HOH . D 4 HOH A 136 6136 137 HOH HOH . D 4 HOH A 137 6137 138 HOH HOH . D 4 HOH A 138 6138 139 HOH HOH . D 4 HOH A 139 6139 140 HOH HOH . D 4 HOH A 140 6140 141 HOH HOH . D 4 HOH A 141 6141 142 HOH HOH . D 4 HOH A 142 6142 143 HOH HOH . D 4 HOH A 143 6143 144 HOH HOH . D 4 HOH A 144 6144 145 HOH HOH . D 4 HOH A 145 6145 146 HOH HOH . D 4 HOH A 146 6146 147 HOH HOH . D 4 HOH A 147 6147 148 HOH HOH . D 4 HOH A 148 6148 149 HOH HOH . D 4 HOH A 149 6149 150 HOH HOH . D 4 HOH A 150 6150 151 HOH HOH . D 4 HOH A 151 6151 152 HOH HOH . D 4 HOH A 152 6152 153 HOH HOH . D 4 HOH A 153 6153 154 HOH HOH . D 4 HOH A 154 6154 155 HOH HOH . D 4 HOH A 155 6155 156 HOH HOH . D 4 HOH A 156 6156 157 HOH HOH . D 4 HOH A 157 6157 158 HOH HOH . D 4 HOH A 158 6158 159 HOH HOH . D 4 HOH A 159 6159 160 HOH HOH . D 4 HOH A 160 6160 161 HOH HOH . D 4 HOH A 161 6161 162 HOH HOH . D 4 HOH A 162 6162 163 HOH HOH . D 4 HOH A 163 6163 164 HOH HOH . D 4 HOH A 164 6164 165 HOH HOH . D 4 HOH A 165 6165 166 HOH HOH . D 4 HOH A 166 6166 167 HOH HOH . D 4 HOH A 167 6167 168 HOH HOH . D 4 HOH A 168 6168 169 HOH HOH . D 4 HOH A 169 6169 170 HOH HOH . D 4 HOH A 170 6170 171 HOH HOH . D 4 HOH A 171 6171 172 HOH HOH . D 4 HOH A 172 6172 174 HOH HOH . D 4 HOH A 173 6173 175 HOH HOH . D 4 HOH A 174 6174 176 HOH HOH . D 4 HOH A 175 6175 177 HOH HOH . D 4 HOH A 176 6176 178 HOH HOH . D 4 HOH A 177 6177 179 HOH HOH . D 4 HOH A 178 6178 180 HOH HOH . D 4 HOH A 179 6179 181 HOH HOH . D 4 HOH A 180 6180 182 HOH HOH . D 4 HOH A 181 6181 183 HOH HOH . D 4 HOH A 182 6182 184 HOH HOH . D 4 HOH A 183 6183 185 HOH HOH . D 4 HOH A 184 6184 186 HOH HOH . D 4 HOH A 185 6185 187 HOH HOH . D 4 HOH A 186 6186 188 HOH HOH . D 4 HOH A 187 6187 189 HOH HOH . D 4 HOH A 188 6188 190 HOH HOH . D 4 HOH A 189 6189 191 HOH HOH . D 4 HOH A 190 6190 192 HOH HOH . D 4 HOH A 191 6191 193 HOH HOH . D 4 HOH A 192 6192 194 HOH HOH . D 4 HOH A 193 6193 195 HOH HOH . D 4 HOH A 194 6194 196 HOH HOH . D 4 HOH A 195 6195 197 HOH HOH . D 4 HOH A 196 6196 198 HOH HOH . D 4 HOH A 197 6197 199 HOH HOH . D 4 HOH A 198 6198 200 HOH HOH . D 4 HOH A 199 6199 201 HOH HOH . D 4 HOH A 200 6200 202 HOH HOH . D 4 HOH A 201 6201 203 HOH HOH . D 4 HOH A 202 6202 204 HOH HOH . D 4 HOH A 203 6203 205 HOH HOH . D 4 HOH A 204 6204 206 HOH HOH . D 4 HOH A 205 6205 207 HOH HOH . D 4 HOH A 206 6206 208 HOH HOH . D 4 HOH A 207 6207 209 HOH HOH . D 4 HOH A 208 6208 210 HOH HOH . D 4 HOH A 209 6209 211 HOH HOH . D 4 HOH A 210 6210 212 HOH HOH . D 4 HOH A 211 6211 213 HOH HOH . D 4 HOH A 212 6212 214 HOH HOH . D 4 HOH A 213 6213 215 HOH HOH . D 4 HOH A 214 6214 216 HOH HOH . D 4 HOH A 215 6215 217 HOH HOH . D 4 HOH A 216 6216 218 HOH HOH . D 4 HOH A 217 6217 219 HOH HOH . D 4 HOH A 218 6218 220 HOH HOH . D 4 HOH A 219 6219 221 HOH HOH . D 4 HOH A 220 6220 222 HOH HOH . D 4 HOH A 221 6221 223 HOH HOH . D 4 HOH A 222 6222 224 HOH HOH . D 4 HOH A 223 6223 225 HOH HOH . D 4 HOH A 224 6224 226 HOH HOH . D 4 HOH A 225 6225 227 HOH HOH . D 4 HOH A 226 6226 228 HOH HOH . D 4 HOH A 227 6227 229 HOH HOH . D 4 HOH A 228 6228 230 HOH HOH . D 4 HOH A 229 6229 231 HOH HOH . D 4 HOH A 230 6230 232 HOH HOH . D 4 HOH A 231 6231 233 HOH HOH . D 4 HOH A 232 6232 234 HOH HOH . D 4 HOH A 233 6233 235 HOH HOH . D 4 HOH A 234 6234 236 HOH HOH . D 4 HOH A 235 6235 237 HOH HOH . D 4 HOH A 236 6236 238 HOH HOH . D 4 HOH A 237 6237 239 HOH HOH . D 4 HOH A 238 6238 240 HOH HOH . D 4 HOH A 239 6239 241 HOH HOH . D 4 HOH A 240 6240 242 HOH HOH . D 4 HOH A 241 6241 243 HOH HOH . D 4 HOH A 242 6242 244 HOH HOH . D 4 HOH A 243 6243 245 HOH HOH . D 4 HOH A 244 6244 246 HOH HOH . D 4 HOH A 245 6245 247 HOH HOH . E 4 HOH P 1 28 28 HOH HOH . E 4 HOH P 2 173 173 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 1.773 29.206 25.335 1 28.37 ? S SO4 6000 A 1 HETATM 2 O O1 SO4 . . . C 3 0.522 29.646 24.698 1 29.68 ? O1 SO4 6000 A 1 HETATM 3 O O2 SO4 . . . C 3 1.711 29.343 26.797 1 27.9 ? O2 SO4 6000 A 1 HETATM 4 O O3 SO4 . . . C 3 2.04 27.798 25.032 1 29.38 ? O3 SO4 6000 A 1 HETATM 5 O O4 SO4 . . . C 3 2.863 30.009 24.793 1 28.7 ? O4 SO4 6000 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #