data_1Y7U # _model_server_result.job_id 1B64XitC8pA3Sm82dgQcpw _model_server_result.datetime_utc '2024-11-17 18:35:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1y7u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":208}' # _entry.id 1Y7U # _exptl.entry_id 1Y7U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1Y7U _cell.length_a 123.553 _cell.length_b 123.553 _cell.length_c 126.581 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Y7U _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 144 A GLU 141 1_555 D CA CA . A CA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.858 ? covale ? covale1 A C GLU 45 A GLU 42 1_555 A N MSE 46 A MSE 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C MSE 46 A MSE 43 1_555 A N ASP 47 A ASP 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C ASP 47 A ASP 44 1_555 A N MSE 48 A MSE 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 A C MSE 48 A MSE 45 1_555 A N VAL 49 A VAL 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale5 A C SER 66 A SER 63 1_555 A N MSE 67 A MSE 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale6 A C MSE 67 A MSE 64 1_555 A N ASP 68 A ASP 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale7 A C SER 95 A SER 92 1_555 A N MSE 96 A MSE 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale8 A C MSE 96 A MSE 93 1_555 A N GLU 97 A GLU 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc2 D CA CA . A CA 205 1_555 A OD2 ASP 140 A ASP 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.207 ? metalc ? metalc3 D CA CA . A CA 205 1_555 A N ASN 16 A ASN 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.045 ? covale ? covale9 B C GLU 45 B GLU 42 1_555 B N MSE 46 B MSE 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale10 B C MSE 46 B MSE 43 1_555 B N ASP 47 B ASP 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale11 B C ASP 47 B ASP 44 1_555 B N MSE 48 B MSE 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale12 B C MSE 48 B MSE 45 1_555 B N VAL 49 B VAL 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale13 B C SER 66 B SER 63 1_555 B N MSE 67 B MSE 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale14 B C MSE 67 B MSE 64 1_555 B N ASP 68 B ASP 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale15 B C SER 95 B SER 92 1_555 B N MSE 96 B MSE 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale16 B C MSE 96 B MSE 93 1_555 B N GLU 97 B GLU 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale17 C C GLU 45 C GLU 42 1_555 C N MSE 46 C MSE 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale18 C C MSE 46 C MSE 43 1_555 C N ASP 47 C ASP 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale19 C C ASP 47 C ASP 44 1_555 C N MSE 48 C MSE 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale20 C C MSE 48 C MSE 45 1_555 C N VAL 49 C VAL 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale21 C C SER 66 C SER 63 1_555 C N MSE 67 C MSE 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale22 C C MSE 67 C MSE 64 1_555 C N ASP 68 C ASP 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale23 C C SER 95 C SER 92 1_555 C N MSE 96 C MSE 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale24 C C MSE 96 C MSE 93 1_555 C N GLU 97 C GLU 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1Y7U _atom_sites.fract_transf_matrix[1][1] 0.008094 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008094 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0079 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CA A 1 205 205 CA CA . E 3 SO4 A 1 207 207 SO4 SO4 . F 4 COA A 1 201 201 COA COA . G 3 SO4 B 1 206 206 SO4 SO4 . H 4 COA B 1 202 202 COA COA . I 3 SO4 C 1 208 208 SO4 SO4 . J 4 COA C 1 203 203 COA COA . K 5 HOH A 1 208 5 HOH HOH . K 5 HOH A 2 209 11 HOH HOH . K 5 HOH A 3 210 13 HOH HOH . K 5 HOH A 4 211 15 HOH HOH . K 5 HOH A 5 212 16 HOH HOH . K 5 HOH A 6 213 19 HOH HOH . K 5 HOH A 7 214 22 HOH HOH . K 5 HOH A 8 215 23 HOH HOH . K 5 HOH A 9 216 24 HOH HOH . K 5 HOH A 10 217 25 HOH HOH . K 5 HOH A 11 218 29 HOH HOH . K 5 HOH A 12 219 31 HOH HOH . K 5 HOH A 13 220 36 HOH HOH . K 5 HOH A 14 221 41 HOH HOH . K 5 HOH A 15 222 44 HOH HOH . K 5 HOH A 16 223 45 HOH HOH . K 5 HOH A 17 224 47 HOH HOH . K 5 HOH A 18 225 52 HOH HOH . K 5 HOH A 19 226 64 HOH HOH . K 5 HOH A 20 227 65 HOH HOH . K 5 HOH A 21 228 69 HOH HOH . K 5 HOH A 22 229 75 HOH HOH . K 5 HOH A 23 230 77 HOH HOH . K 5 HOH A 24 231 78 HOH HOH . K 5 HOH A 25 232 80 HOH HOH . K 5 HOH A 26 233 81 HOH HOH . K 5 HOH A 27 234 99 HOH HOH . K 5 HOH A 28 235 100 HOH HOH . K 5 HOH A 29 236 101 HOH HOH . K 5 HOH A 30 237 102 HOH HOH . K 5 HOH A 31 238 103 HOH HOH . K 5 HOH A 32 239 108 HOH HOH . K 5 HOH A 33 240 109 HOH HOH . K 5 HOH A 34 241 114 HOH HOH . K 5 HOH A 35 242 118 HOH HOH . K 5 HOH A 36 243 119 HOH HOH . K 5 HOH A 37 244 124 HOH HOH . K 5 HOH A 38 245 127 HOH HOH . K 5 HOH A 39 246 128 HOH HOH . K 5 HOH A 40 247 138 HOH HOH . K 5 HOH A 41 248 141 HOH HOH . K 5 HOH A 42 249 143 HOH HOH . L 5 HOH B 1 207 1 HOH HOH . L 5 HOH B 2 208 2 HOH HOH . L 5 HOH B 3 209 9 HOH HOH . L 5 HOH B 4 210 10 HOH HOH . L 5 HOH B 5 211 14 HOH HOH . L 5 HOH B 6 212 18 HOH HOH . L 5 HOH B 7 213 28 HOH HOH . L 5 HOH B 8 214 33 HOH HOH . L 5 HOH B 9 215 34 HOH HOH . L 5 HOH B 10 216 35 HOH HOH . L 5 HOH B 11 217 37 HOH HOH . L 5 HOH B 12 218 38 HOH HOH . L 5 HOH B 13 219 39 HOH HOH . L 5 HOH B 14 220 40 HOH HOH . L 5 HOH B 15 221 43 HOH HOH . L 5 HOH B 16 222 48 HOH HOH . L 5 HOH B 17 223 49 HOH HOH . L 5 HOH B 18 224 51 HOH HOH . L 5 HOH B 19 225 59 HOH HOH . L 5 HOH B 20 226 63 HOH HOH . L 5 HOH B 21 227 76 HOH HOH . L 5 HOH B 22 228 79 HOH HOH . L 5 HOH B 23 229 83 HOH HOH . L 5 HOH B 24 230 84 HOH HOH . L 5 HOH B 25 231 85 HOH HOH . L 5 HOH B 26 232 86 HOH HOH . L 5 HOH B 27 233 87 HOH HOH . L 5 HOH B 28 234 88 HOH HOH . L 5 HOH B 29 235 89 HOH HOH . L 5 HOH B 30 236 96 HOH HOH . L 5 HOH B 31 237 97 HOH HOH . L 5 HOH B 32 238 98 HOH HOH . L 5 HOH B 33 239 111 HOH HOH . L 5 HOH B 34 240 115 HOH HOH . L 5 HOH B 35 241 116 HOH HOH . L 5 HOH B 36 242 117 HOH HOH . L 5 HOH B 37 243 122 HOH HOH . L 5 HOH B 38 244 123 HOH HOH . L 5 HOH B 39 245 129 HOH HOH . L 5 HOH B 40 246 130 HOH HOH . L 5 HOH B 41 247 131 HOH HOH . L 5 HOH B 42 248 132 HOH HOH . L 5 HOH B 43 249 133 HOH HOH . L 5 HOH B 44 250 134 HOH HOH . L 5 HOH B 45 251 135 HOH HOH . L 5 HOH B 46 252 140 HOH HOH . L 5 HOH B 47 253 144 HOH HOH . M 5 HOH C 1 209 3 HOH HOH . M 5 HOH C 2 210 4 HOH HOH . M 5 HOH C 3 211 6 HOH HOH . M 5 HOH C 4 212 7 HOH HOH . M 5 HOH C 5 213 8 HOH HOH . M 5 HOH C 6 214 12 HOH HOH . M 5 HOH C 7 215 17 HOH HOH . M 5 HOH C 8 216 20 HOH HOH . M 5 HOH C 9 217 21 HOH HOH . M 5 HOH C 10 218 26 HOH HOH . M 5 HOH C 11 219 27 HOH HOH . M 5 HOH C 12 220 30 HOH HOH . M 5 HOH C 13 221 32 HOH HOH . M 5 HOH C 14 222 42 HOH HOH . M 5 HOH C 15 223 46 HOH HOH . M 5 HOH C 16 224 50 HOH HOH . M 5 HOH C 17 225 53 HOH HOH . M 5 HOH C 18 226 54 HOH HOH . M 5 HOH C 19 227 55 HOH HOH . M 5 HOH C 20 228 56 HOH HOH . M 5 HOH C 21 229 57 HOH HOH . M 5 HOH C 22 230 58 HOH HOH . M 5 HOH C 23 231 60 HOH HOH . M 5 HOH C 24 232 61 HOH HOH . M 5 HOH C 25 233 62 HOH HOH . M 5 HOH C 26 234 66 HOH HOH . M 5 HOH C 27 235 67 HOH HOH . M 5 HOH C 28 236 70 HOH HOH . M 5 HOH C 29 237 71 HOH HOH . M 5 HOH C 30 238 72 HOH HOH . M 5 HOH C 31 239 73 HOH HOH . M 5 HOH C 32 240 74 HOH HOH . M 5 HOH C 33 241 82 HOH HOH . M 5 HOH C 34 242 90 HOH HOH . M 5 HOH C 35 243 91 HOH HOH . M 5 HOH C 36 244 92 HOH HOH . M 5 HOH C 37 245 93 HOH HOH . M 5 HOH C 38 246 94 HOH HOH . M 5 HOH C 39 247 95 HOH HOH . M 5 HOH C 40 248 104 HOH HOH . M 5 HOH C 41 249 105 HOH HOH . M 5 HOH C 42 250 106 HOH HOH . M 5 HOH C 43 251 107 HOH HOH . M 5 HOH C 44 252 110 HOH HOH . M 5 HOH C 45 253 112 HOH HOH . M 5 HOH C 46 254 113 HOH HOH . M 5 HOH C 47 255 120 HOH HOH . M 5 HOH C 48 256 121 HOH HOH . M 5 HOH C 49 257 125 HOH HOH . M 5 HOH C 50 258 126 HOH HOH . M 5 HOH C 51 259 136 HOH HOH . M 5 HOH C 52 260 137 HOH HOH . M 5 HOH C 53 261 139 HOH HOH . M 5 HOH C 54 262 142 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . I 3 -2.612 8.209 -23.04 1 101.26 ? S SO4 208 C 1 HETATM 2 O O1 SO4 . . . I 3 -1.382 7.658 -23.703 1 100.75 ? O1 SO4 208 C 1 HETATM 3 O O2 SO4 . . . I 3 -3.809 7.933 -23.905 1 100.58 ? O2 SO4 208 C 1 HETATM 4 O O3 SO4 . . . I 3 -2.817 7.53 -21.726 1 101.68 ? O3 SO4 208 C 1 HETATM 5 O O4 SO4 . . . I 3 -2.452 9.68 -22.79 1 99.86 ? O4 SO4 208 C 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #