data_1Y9L
#
_model_server_result.job_id            5DJ1zjuRQFoKOSTG0_OWsw 
_model_server_result.datetime_utc      '2025-04-28 09:11:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1y9l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":150}' 
#
_entry.id    1Y9L 
#
_exptl.entry_id    1Y9L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              156.308 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            UNDECANE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.27 
_cell.angle_gamma         90 
_cell.entry_id            1Y9L 
_cell.length_a            82.844 
_cell.length_b            49.683 
_cell.length_c            29.487 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1Y9L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             42 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              69 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             68 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              95 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.055 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C11 H24' 
_chem_comp.formula_weight    156.308 
_chem_comp.id                UND 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              UNDECANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'LIPID FRAGMENT' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 UND sing 364 n n 
C1 H11 UND sing 365 n n 
C1 H12 UND sing 366 n n 
C1 H13 UND sing 367 n n 
C2 C3 UND sing 368 n n 
C2 H21 UND sing 369 n n 
C2 H22 UND sing 370 n n 
C3 C4 UND sing 371 n n 
C3 H31 UND sing 372 n n 
C3 H32 UND sing 373 n n 
C4 C5 UND sing 374 n n 
C4 H41 UND sing 375 n n 
C4 H42 UND sing 376 n n 
C5 C6 UND sing 377 n n 
C5 H51 UND sing 378 n n 
C5 H52 UND sing 379 n n 
C6 C7 UND sing 380 n n 
C6 H61 UND sing 381 n n 
C6 H62 UND sing 382 n n 
C7 C8 UND sing 383 n n 
C7 H71 UND sing 384 n n 
C7 H72 UND sing 385 n n 
C8 C9 UND sing 386 n n 
C8 H81 UND sing 387 n n 
C8 H82 UND sing 388 n n 
C9 C10 UND sing 389 n n 
C9 H91 UND sing 390 n n 
C9 H92 UND sing 391 n n 
C10 C11 UND sing 392 n n 
C10 H101 UND sing 393 n n 
C10 H102 UND sing 394 n n 
C11 H111 UND sing 395 n n 
C11 H112 UND sing 396 n n 
C11 H113 UND sing 397 n n 
#
_atom_sites.entry_id                     1Y9L 
_atom_sites.fract_transf_matrix[1][1]    0.012071 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002625 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020128 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.034706 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ACT A 1 160 160 ACT ACT . 
C 3 UND A 1 150 150 UND UND . 
D 4 HOH A 1 200 200 HOH HOH . 
D 4 HOH A 2 201 201 HOH HOH . 
D 4 HOH A 3 202 202 HOH HOH . 
D 4 HOH A 4 203 203 HOH HOH . 
D 4 HOH A 5 204 204 HOH HOH . 
D 4 HOH A 6 205 205 HOH HOH . 
D 4 HOH A 7 206 206 HOH HOH . 
D 4 HOH A 8 207 207 HOH HOH . 
D 4 HOH A 9 208 208 HOH HOH . 
D 4 HOH A 10 209 209 HOH HOH . 
D 4 HOH A 11 210 210 HOH HOH . 
D 4 HOH A 12 211 211 HOH HOH . 
D 4 HOH A 13 212 212 HOH HOH . 
D 4 HOH A 14 213 213 HOH HOH . 
D 4 HOH A 15 214 214 HOH HOH . 
D 4 HOH A 16 215 215 HOH HOH . 
D 4 HOH A 17 216 216 HOH HOH . 
D 4 HOH A 18 217 217 HOH HOH . 
D 4 HOH A 19 218 218 HOH HOH . 
D 4 HOH A 20 219 219 HOH HOH . 
D 4 HOH A 21 220 220 HOH HOH . 
D 4 HOH A 22 221 221 HOH HOH . 
D 4 HOH A 23 222 222 HOH HOH . 
D 4 HOH A 24 223 223 HOH HOH . 
D 4 HOH A 25 224 224 HOH HOH . 
D 4 HOH A 26 225 225 HOH HOH . 
D 4 HOH A 27 226 226 HOH HOH . 
D 4 HOH A 28 227 227 HOH HOH . 
D 4 HOH A 29 228 228 HOH HOH . 
D 4 HOH A 30 229 229 HOH HOH . 
D 4 HOH A 31 230 230 HOH HOH . 
D 4 HOH A 32 231 231 HOH HOH . 
D 4 HOH A 33 232 232 HOH HOH . 
D 4 HOH A 34 233 233 HOH HOH . 
D 4 HOH A 35 234 234 HOH HOH . 
D 4 HOH A 36 235 235 HOH HOH . 
D 4 HOH A 37 236 236 HOH HOH . 
D 4 HOH A 38 237 237 HOH HOH . 
D 4 HOH A 39 238 238 HOH HOH . 
D 4 HOH A 40 239 239 HOH HOH . 
D 4 HOH A 41 240 240 HOH HOH . 
D 4 HOH A 42 241 241 HOH HOH . 
D 4 HOH A 43 242 242 HOH HOH . 
D 4 HOH A 44 243 243 HOH HOH . 
D 4 HOH A 45 244 244 HOH HOH . 
D 4 HOH A 46 245 245 HOH HOH . 
D 4 HOH A 47 246 246 HOH HOH . 
D 4 HOH A 48 247 247 HOH HOH . 
D 4 HOH A 49 248 248 HOH HOH . 
D 4 HOH A 50 249 249 HOH HOH . 
D 4 HOH A 51 250 250 HOH HOH . 
D 4 HOH A 52 251 251 HOH HOH . 
D 4 HOH A 53 252 252 HOH HOH . 
D 4 HOH A 54 253 253 HOH HOH . 
D 4 HOH A 55 254 254 HOH HOH . 
D 4 HOH A 56 255 255 HOH HOH . 
D 4 HOH A 57 256 256 HOH HOH . 
D 4 HOH A 58 257 257 HOH HOH . 
D 4 HOH A 59 258 258 HOH HOH . 
D 4 HOH A 60 259 259 HOH HOH . 
D 4 HOH A 61 260 260 HOH HOH . 
D 4 HOH A 62 261 261 HOH HOH . 
D 4 HOH A 63 262 262 HOH HOH . 
D 4 HOH A 64 263 263 HOH HOH . 
D 4 HOH A 65 264 264 HOH HOH . 
D 4 HOH A 66 265 265 HOH HOH . 
D 4 HOH A 67 266 266 HOH HOH . 
D 4 HOH A 68 267 267 HOH HOH . 
D 4 HOH A 69 268 268 HOH HOH . 
D 4 HOH A 70 269 269 HOH HOH . 
D 4 HOH A 71 270 270 HOH HOH . 
D 4 HOH A 72 271 271 HOH HOH . 
D 4 HOH A 73 272 272 HOH HOH . 
D 4 HOH A 74 273 273 HOH HOH . 
D 4 HOH A 75 274 274 HOH HOH . 
D 4 HOH A 76 275 275 HOH HOH . 
D 4 HOH A 77 276 276 HOH HOH . 
D 4 HOH A 78 277 277 HOH HOH . 
D 4 HOH A 79 278 278 HOH HOH . 
D 4 HOH A 80 279 279 HOH HOH . 
D 4 HOH A 81 280 280 HOH HOH . 
D 4 HOH A 82 281 281 HOH HOH . 
D 4 HOH A 83 282 282 HOH HOH . 
D 4 HOH A 84 283 283 HOH HOH . 
D 4 HOH A 85 284 284 HOH HOH . 
D 4 HOH A 86 285 285 HOH HOH . 
D 4 HOH A 87 286 286 HOH HOH . 
D 4 HOH A 88 287 287 HOH HOH . 
D 4 HOH A 89 288 288 HOH HOH . 
D 4 HOH A 90 289 289 HOH HOH . 
D 4 HOH A 91 290 290 HOH HOH . 
D 4 HOH A 92 291 291 HOH HOH . 
D 4 HOH A 93 292 292 HOH HOH . 
D 4 HOH A 94 293 293 HOH HOH . 
D 4 HOH A 95 294 294 HOH HOH . 
D 4 HOH A 96 295 295 HOH HOH . 
D 4 HOH A 97 296 296 HOH HOH . 
D 4 HOH A 98 297 297 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 UND . . . C 3 17.329 42.181 9.965 1 36.09 ? C1 UND 150 A 1 
HETATM 2 C C2 UND . . . C 3 18.785 41.878 9.677 1 36.31 ? C2 UND 150 A 1 
HETATM 3 C C3 UND . . . C 3 19.01 41.61 8.161 1 35.83 ? C3 UND 150 A 1 
HETATM 4 C C4 UND . . . C 3 20.409 42.044 7.728 1 36.4 ? C4 UND 150 A 1 
HETATM 5 C C5 UND . . . C 3 21.187 40.868 7.146 1 35.83 ? C5 UND 150 A 1 
HETATM 6 C C6 UND . . . C 3 22.319 41.377 6.262 1 37.74 ? C6 UND 150 A 1 
HETATM 7 C C7 UND . . . C 3 23.665 41.244 6.96 1 35.65 ? C7 UND 150 A 1 
HETATM 8 C C8 UND . . . C 3 24.453 42.544 6.87 1 35.33 ? C8 UND 150 A 1 
HETATM 9 C C9 UND . . . C 3 25.526 42.422 5.798 1 34.27 ? C9 UND 150 A 1 
HETATM 10 C C10 UND . . . C 3 25.074 43.05 4.484 1 34.16 ? C10 UND 150 A 1 
HETATM 11 C C11 UND . . . C 3 26.112 42.897 3.393 1 32.97 ? C11 UND 150 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           11 
#