data_1Y9Q # _model_server_result.job_id PGhEiv4PiV4P-6JRagJpsw _model_server_result.datetime_utc '2024-11-23 15:57:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1y9q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":202}' # _entry.id 1Y9Q # _exptl.entry_id 1Y9Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1Y9Q _cell.length_a 79.226 _cell.length_b 79.226 _cell.length_c 49.849 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Y9Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_765 -x+2,-x+y+1,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 118.839 68.611729 16.616333 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 6 A VAL 6 1_555 A N MSE 7 A MSE 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C MSE 7 A MSE 7 1_555 A N PHE 8 A PHE 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C ALA 39 A ALA 39 1_555 A N MSE 40 A MSE 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C MSE 40 A MSE 40 1_555 A N LEU 41 A LEU 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C ASN 89 A ASN 89 1_555 A N MSE 90 A MSE 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale6 A C MSE 90 A MSE 90 1_555 A N LYS 91 A LYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale7 A C GLN 117 A GLN 117 1_555 A N MSE 118 A MSE 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale8 A C MSE 118 A MSE 118 1_555 A N SER 119 A SER 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale9 A C ILE 136 A ILE 136 1_555 A N MSE 137 A MSE 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale10 A C MSE 137 A MSE 137 1_555 A N LYS 138 A LYS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? metalc ? metalc1 A NE2 HIS 122 A HIS 122 1_555 B ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc2 A OE2 GLU 128 A GLU 128 1_555 B ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc3 A NE2 HIS 162 A HIS 162 1_555 B ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc4 A OH TYR 164 A TYR 164 1_555 B ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc5 C N MED . A MED 201 1_555 B ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc6 C O MED . A MED 201 1_555 B ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1Y9Q _atom_sites.fract_transf_matrix[1][1] 0.012622 _atom_sites.fract_transf_matrix[1][2] 0.007287 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014575 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020061 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 202 202 ZN ZN . C 3 MED A 1 201 201 MED MED . D 4 HOH A 1 203 1 HOH TIP . D 4 HOH A 2 204 2 HOH TIP . D 4 HOH A 3 205 3 HOH TIP . D 4 HOH A 4 206 4 HOH TIP . D 4 HOH A 5 207 5 HOH TIP . D 4 HOH A 6 208 6 HOH TIP . D 4 HOH A 7 209 7 HOH TIP . D 4 HOH A 8 210 8 HOH TIP . D 4 HOH A 9 211 9 HOH TIP . D 4 HOH A 10 212 10 HOH TIP . D 4 HOH A 11 213 11 HOH TIP . D 4 HOH A 12 214 12 HOH TIP . D 4 HOH A 13 215 13 HOH TIP . D 4 HOH A 14 216 14 HOH TIP . D 4 HOH A 15 217 15 HOH TIP . D 4 HOH A 16 218 16 HOH TIP . D 4 HOH A 17 219 17 HOH TIP . D 4 HOH A 18 220 18 HOH TIP . D 4 HOH A 19 221 19 HOH TIP . D 4 HOH A 20 222 20 HOH TIP . D 4 HOH A 21 223 21 HOH TIP . D 4 HOH A 22 224 22 HOH TIP . D 4 HOH A 23 225 23 HOH TIP . D 4 HOH A 24 226 24 HOH TIP . D 4 HOH A 25 227 25 HOH TIP . D 4 HOH A 26 228 26 HOH TIP . D 4 HOH A 27 229 27 HOH TIP . D 4 HOH A 28 230 28 HOH TIP . D 4 HOH A 29 231 29 HOH TIP . D 4 HOH A 30 232 30 HOH TIP . D 4 HOH A 31 233 31 HOH TIP . D 4 HOH A 32 234 32 HOH TIP . D 4 HOH A 33 235 33 HOH TIP . D 4 HOH A 34 236 34 HOH TIP . D 4 HOH A 35 237 35 HOH TIP . D 4 HOH A 36 238 36 HOH TIP . D 4 HOH A 37 239 37 HOH TIP . D 4 HOH A 38 240 38 HOH TIP . D 4 HOH A 39 241 39 HOH TIP . D 4 HOH A 40 242 40 HOH TIP . D 4 HOH A 41 243 41 HOH TIP . D 4 HOH A 42 244 42 HOH TIP . D 4 HOH A 43 245 43 HOH TIP . D 4 HOH A 44 246 44 HOH TIP . D 4 HOH A 45 247 45 HOH TIP . D 4 HOH A 46 248 46 HOH TIP . D 4 HOH A 47 249 47 HOH TIP . D 4 HOH A 48 250 48 HOH TIP . D 4 HOH A 49 251 49 HOH TIP . D 4 HOH A 50 252 50 HOH TIP . D 4 HOH A 51 253 51 HOH TIP . D 4 HOH A 52 254 52 HOH TIP . D 4 HOH A 53 255 53 HOH TIP . D 4 HOH A 54 256 54 HOH TIP . D 4 HOH A 55 257 55 HOH TIP . D 4 HOH A 56 258 56 HOH TIP . D 4 HOH A 57 259 57 HOH TIP . D 4 HOH A 58 260 58 HOH TIP . D 4 HOH A 59 261 59 HOH TIP . D 4 HOH A 60 262 60 HOH TIP . D 4 HOH A 61 263 61 HOH TIP . D 4 HOH A 62 264 62 HOH TIP . D 4 HOH A 63 265 63 HOH TIP . D 4 HOH A 64 266 64 HOH TIP . D 4 HOH A 65 267 65 HOH TIP . D 4 HOH A 66 268 66 HOH TIP . D 4 HOH A 67 269 67 HOH TIP . D 4 HOH A 68 270 68 HOH TIP . D 4 HOH A 69 271 69 HOH TIP . D 4 HOH A 70 272 70 HOH TIP . D 4 HOH A 71 273 71 HOH TIP . D 4 HOH A 72 274 72 HOH TIP . D 4 HOH A 73 275 73 HOH TIP . D 4 HOH A 74 276 74 HOH TIP . D 4 HOH A 75 277 75 HOH TIP . D 4 HOH A 76 278 76 HOH TIP . D 4 HOH A 77 279 77 HOH TIP . D 4 HOH A 78 280 78 HOH TIP . D 4 HOH A 79 281 79 HOH TIP . D 4 HOH A 80 282 80 HOH TIP . D 4 HOH A 81 283 81 HOH TIP . D 4 HOH A 82 284 82 HOH TIP . D 4 HOH A 83 285 83 HOH TIP . D 4 HOH A 84 286 84 HOH TIP . D 4 HOH A 85 287 85 HOH TIP . D 4 HOH A 86 288 86 HOH TIP . D 4 HOH A 87 289 87 HOH TIP . D 4 HOH A 88 290 88 HOH TIP . D 4 HOH A 89 291 89 HOH TIP . D 4 HOH A 90 292 90 HOH TIP . D 4 HOH A 91 293 91 HOH TIP . D 4 HOH A 92 294 92 HOH TIP . D 4 HOH A 93 295 93 HOH TIP . D 4 HOH A 94 296 94 HOH TIP . D 4 HOH A 95 297 95 HOH TIP . D 4 HOH A 96 298 96 HOH TIP . D 4 HOH A 97 299 97 HOH TIP . D 4 HOH A 98 300 98 HOH TIP . D 4 HOH A 99 301 99 HOH TIP . D 4 HOH A 100 302 100 HOH TIP . D 4 HOH A 101 303 101 HOH TIP . D 4 HOH A 102 304 102 HOH TIP . D 4 HOH A 103 305 103 HOH TIP . D 4 HOH A 104 306 104 HOH TIP . D 4 HOH A 105 307 105 HOH TIP . D 4 HOH A 106 308 106 HOH TIP . D 4 HOH A 107 309 107 HOH TIP . D 4 HOH A 108 310 108 HOH TIP . D 4 HOH A 109 311 109 HOH TIP . D 4 HOH A 110 312 110 HOH TIP . D 4 HOH A 111 313 111 HOH TIP . D 4 HOH A 112 314 112 HOH TIP . D 4 HOH A 113 315 113 HOH TIP . D 4 HOH A 114 316 114 HOH TIP . D 4 HOH A 115 317 115 HOH TIP . D 4 HOH A 116 318 116 HOH TIP . D 4 HOH A 117 319 117 HOH TIP . D 4 HOH A 118 320 118 HOH TIP . D 4 HOH A 119 321 119 HOH TIP . D 4 HOH A 120 322 120 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 65.472 _atom_site.Cartn_y 19.371 _atom_site.Cartn_z -2.559 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.8 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #