data_1YAS # _model_server_result.job_id tHted4lPHE5VDutOWJSmAQ _model_server_result.datetime_utc '2024-11-15 04:04:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1yas # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":300}' # _entry.id 1YAS # _exptl.entry_id 1YAS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 156.162 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HISTIDINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1YAS _cell.length_a 47.703 _cell.length_b 109.01 _cell.length_c 128.226 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YAS _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 109.01 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H10 N3 O2 1' _chem_comp.formula_weight 156.162 _chem_comp.id HIS _chem_comp.mon_nstd_flag y _chem_comp.name HISTIDINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA HIS sing 129 n n N H HIS sing 130 n n N H2 HIS sing 131 n n CA C HIS sing 132 n n CA CB HIS sing 133 n n CA HA HIS sing 134 n n C O HIS doub 135 n n C OXT HIS sing 136 n n CB CG HIS sing 137 n n CB HB2 HIS sing 138 n n CB HB3 HIS sing 139 n n CG ND1 HIS sing 140 n y CG CD2 HIS doub 141 n y ND1 CE1 HIS doub 142 n y ND1 HD1 HIS sing 143 n n CD2 NE2 HIS sing 144 n y CD2 HD2 HIS sing 145 n n CE1 NE2 HIS sing 146 n y CE1 HE1 HIS sing 147 n n NE2 HE2 HIS sing 148 n n OXT HXT HIS sing 149 n n # _atom_sites.entry_id 1YAS _atom_sites.fract_transf_matrix[1][1] 0.020963 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009173 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007799 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 301 301 SO4 SO4 . C 3 HIS A 1 300 300 HIS HIS . D 4 HOH A 1 302 302 HOH HOH . D 4 HOH A 2 303 303 HOH HOH . D 4 HOH A 3 304 304 HOH HOH . D 4 HOH A 4 305 305 HOH HOH . D 4 HOH A 5 306 306 HOH HOH . D 4 HOH A 6 307 307 HOH HOH . D 4 HOH A 7 308 308 HOH HOH . D 4 HOH A 8 309 309 HOH HOH . D 4 HOH A 9 310 310 HOH HOH . D 4 HOH A 10 311 311 HOH HOH . D 4 HOH A 11 312 312 HOH HOH . D 4 HOH A 12 313 313 HOH HOH . D 4 HOH A 13 314 314 HOH HOH . D 4 HOH A 14 315 315 HOH HOH . D 4 HOH A 15 316 316 HOH HOH . D 4 HOH A 16 317 317 HOH HOH . D 4 HOH A 17 318 318 HOH HOH . D 4 HOH A 18 319 319 HOH HOH . D 4 HOH A 19 320 320 HOH HOH . D 4 HOH A 20 321 321 HOH HOH . D 4 HOH A 21 322 322 HOH HOH . D 4 HOH A 22 323 323 HOH HOH . D 4 HOH A 23 324 324 HOH HOH . D 4 HOH A 24 325 325 HOH HOH . D 4 HOH A 25 326 326 HOH HOH . D 4 HOH A 26 327 327 HOH HOH . D 4 HOH A 27 328 328 HOH HOH . D 4 HOH A 28 329 329 HOH HOH . D 4 HOH A 29 330 330 HOH HOH . D 4 HOH A 30 331 331 HOH HOH . D 4 HOH A 31 332 332 HOH HOH . D 4 HOH A 32 333 333 HOH HOH . D 4 HOH A 33 334 334 HOH HOH . D 4 HOH A 34 335 335 HOH HOH . D 4 HOH A 35 336 336 HOH HOH . D 4 HOH A 36 337 337 HOH HOH . D 4 HOH A 37 338 338 HOH HOH . D 4 HOH A 38 339 339 HOH HOH . D 4 HOH A 39 340 340 HOH HOH . D 4 HOH A 40 341 341 HOH HOH . D 4 HOH A 41 342 342 HOH HOH . D 4 HOH A 42 343 343 HOH HOH . D 4 HOH A 43 344 344 HOH HOH . D 4 HOH A 44 345 345 HOH HOH . D 4 HOH A 45 346 346 HOH HOH . D 4 HOH A 46 347 347 HOH HOH . D 4 HOH A 47 348 348 HOH HOH . D 4 HOH A 48 349 349 HOH HOH . D 4 HOH A 49 350 350 HOH HOH . D 4 HOH A 50 351 351 HOH HOH . D 4 HOH A 51 352 352 HOH HOH . D 4 HOH A 52 353 353 HOH HOH . D 4 HOH A 53 354 354 HOH HOH . D 4 HOH A 54 355 355 HOH HOH . D 4 HOH A 55 356 356 HOH HOH . D 4 HOH A 56 357 357 HOH HOH . D 4 HOH A 57 358 358 HOH HOH . D 4 HOH A 58 359 359 HOH HOH . D 4 HOH A 59 360 360 HOH HOH . D 4 HOH A 60 361 361 HOH HOH . D 4 HOH A 61 362 362 HOH HOH . D 4 HOH A 62 363 363 HOH HOH . D 4 HOH A 63 364 364 HOH HOH . D 4 HOH A 64 365 365 HOH HOH . D 4 HOH A 65 366 366 HOH HOH . D 4 HOH A 66 367 367 HOH HOH . D 4 HOH A 67 368 368 HOH HOH . D 4 HOH A 68 369 369 HOH HOH . D 4 HOH A 69 370 370 HOH HOH . D 4 HOH A 70 571 571 HOH HOH . D 4 HOH A 71 572 572 HOH HOH . D 4 HOH A 72 573 573 HOH HOH . D 4 HOH A 73 574 574 HOH HOH . D 4 HOH A 74 575 575 HOH HOH . D 4 HOH A 75 576 576 HOH HOH . D 4 HOH A 76 577 577 HOH HOH . D 4 HOH A 77 578 578 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N HIS . . . C 3 13.843 54.193 14.53 1 38.03 ? N HIS 300 A 1 HETATM 2 C CA HIS . . . C 3 13.966 53.506 15.784 1 36.65 ? CA HIS 300 A 1 HETATM 3 C C HIS . . . C 3 15.293 52.787 15.715 1 35.51 ? C HIS 300 A 1 HETATM 4 O O HIS . . . C 3 15.691 52.459 16.813 1 34.74 ? O HIS 300 A 1 HETATM 5 C CB HIS . . . C 3 12.803 52.557 15.945 1 38.01 ? CB HIS 300 A 1 HETATM 6 C CG HIS . . . C 3 12.338 52.763 17.36 1 40.57 ? CG HIS 300 A 1 HETATM 7 N ND1 HIS . . . C 3 12.336 51.939 18.431 1 42.63 ? ND1 HIS 300 A 1 HETATM 8 C CD2 HIS . . . C 3 11.853 53.975 17.801 1 41.7 ? CD2 HIS 300 A 1 HETATM 9 C CE1 HIS . . . C 3 11.902 52.593 19.499 1 41.91 ? CE1 HIS 300 A 1 HETATM 10 N NE2 HIS . . . C 3 11.616 53.813 19.082 1 42.36 ? NE2 HIS 300 A 1 HETATM 11 O OXT HIS . . . C 3 15.914 52.643 14.653 1 32.65 ? OXT HIS 300 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 11 #