data_1YCA
#
_model_server_result.job_id            AFtYcVkf6y8u4Z4SX7EAFg 
_model_server_result.datetime_utc      '2024-11-23 21:29:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1yca 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":155}' 
#
_entry.id    1YCA 
#
_exptl.entry_id    1YCA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              28.01 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CARBON MONOXIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.2 
_cell.angle_gamma         90 
_cell.entry_id            1YCA 
_cell.length_a            124.2 
_cell.length_b            42.5 
_cell.length_c            92.1 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1YCA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 93 A HIS 93 1_555 C FE HEM . A HEM 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? 
metalc ? metalc2 C FE HEM . A HEM 154 1_555 D C CMO . A CMO 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.789 ? 
metalc ? metalc3 C FE HEM . A HEM 154 1_555 D O CMO . A CMO 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.006 ? 
metalc ? metalc4 B NE2 HIS 93 B HIS 93 1_555 E FE HEM . B HEM 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? 
metalc ? metalc5 E FE HEM . B HEM 154 1_555 F C CMO . B CMO 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.818 ? 
metalc ? metalc6 E FE HEM . B HEM 154 1_555 F O CMO . B CMO 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.984 ? 
#
_chem_comp.formula           'C O' 
_chem_comp.formula_weight    28.01 
_chem_comp.id                CMO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CARBON MONOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_chem_comp_bond.atom_id_1             C 
_chem_comp_bond.atom_id_2             O 
_chem_comp_bond.comp_id               CMO 
_chem_comp_bond.value_order           trip 
_chem_comp_bond.pdbx_ordinal          70 
_chem_comp_bond.pdbx_stereo_config    n 
_chem_comp_bond.pdbx_aromatic_flag    n 
#
_atom_sites.entry_id                     1YCA 
_atom_sites.fract_transf_matrix[1][1]    0.008052 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000309 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023529 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010866 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 154 154 HEM HEM . 
D 3 CMO A 1 155 154 CMO HEM . 
E 2 HEM B 1 154 154 HEM HEM . 
F 3 CMO B 1 155 154 CMO HEM . 
G 4 HOH A 1 156 1 HOH HOH . 
G 4 HOH A 2 157 2 HOH HOH . 
G 4 HOH A 3 158 3 HOH HOH . 
G 4 HOH A 4 159 4 HOH HOH . 
G 4 HOH A 5 160 11 HOH HOH . 
G 4 HOH A 6 161 1 HOH HOH . 
G 4 HOH A 7 162 2 HOH HOH . 
G 4 HOH A 8 163 3 HOH HOH . 
G 4 HOH A 9 164 4 HOH HOH . 
G 4 HOH A 10 165 5 HOH HOH . 
G 4 HOH A 11 166 6 HOH HOH . 
G 4 HOH A 12 167 7 HOH HOH . 
G 4 HOH A 13 168 8 HOH HOH . 
G 4 HOH A 14 169 9 HOH HOH . 
G 4 HOH A 15 170 10 HOH HOH . 
G 4 HOH A 16 171 11 HOH HOH . 
G 4 HOH A 17 172 12 HOH HOH . 
G 4 HOH A 18 173 13 HOH HOH . 
G 4 HOH A 19 174 14 HOH HOH . 
G 4 HOH A 20 175 15 HOH HOH . 
G 4 HOH A 21 176 16 HOH HOH . 
G 4 HOH A 22 177 17 HOH HOH . 
G 4 HOH A 23 178 18 HOH HOH . 
G 4 HOH A 24 179 19 HOH HOH . 
G 4 HOH A 25 180 20 HOH HOH . 
G 4 HOH A 26 181 21 HOH HOH . 
G 4 HOH A 27 182 22 HOH HOH . 
G 4 HOH A 28 183 23 HOH HOH . 
G 4 HOH A 29 184 24 HOH HOH . 
G 4 HOH A 30 185 25 HOH HOH . 
G 4 HOH A 31 186 26 HOH HOH . 
G 4 HOH A 32 187 27 HOH HOH . 
G 4 HOH A 33 188 28 HOH HOH . 
G 4 HOH A 34 189 29 HOH HOH . 
G 4 HOH A 35 190 30 HOH HOH . 
G 4 HOH A 36 191 31 HOH HOH . 
G 4 HOH A 37 192 32 HOH HOH . 
G 4 HOH A 38 193 33 HOH HOH . 
G 4 HOH A 39 194 34 HOH HOH . 
G 4 HOH A 40 195 35 HOH HOH . 
G 4 HOH A 41 196 36 HOH HOH . 
G 4 HOH A 42 197 37 HOH HOH . 
G 4 HOH A 43 198 38 HOH HOH . 
G 4 HOH A 44 199 39 HOH HOH . 
G 4 HOH A 45 200 40 HOH HOH . 
G 4 HOH A 46 201 41 HOH HOH . 
G 4 HOH A 47 202 42 HOH HOH . 
G 4 HOH A 48 203 43 HOH HOH . 
G 4 HOH A 49 204 44 HOH HOH . 
H 4 HOH B 1 156 5 HOH HOH . 
H 4 HOH B 2 157 6 HOH HOH . 
H 4 HOH B 3 158 7 HOH HOH . 
H 4 HOH B 4 159 8 HOH HOH . 
H 4 HOH B 5 160 9 HOH HOH . 
H 4 HOH B 6 161 10 HOH HOH . 
H 4 HOH B 7 162 12 HOH HOH . 
H 4 HOH B 8 163 1 HOH HOH . 
H 4 HOH B 9 164 2 HOH HOH . 
H 4 HOH B 10 165 3 HOH HOH . 
H 4 HOH B 11 166 4 HOH HOH . 
H 4 HOH B 12 167 5 HOH HOH . 
H 4 HOH B 13 168 6 HOH HOH . 
H 4 HOH B 14 169 7 HOH HOH . 
H 4 HOH B 15 170 8 HOH HOH . 
H 4 HOH B 16 171 9 HOH HOH . 
H 4 HOH B 17 172 10 HOH HOH . 
H 4 HOH B 18 173 11 HOH HOH . 
H 4 HOH B 19 174 12 HOH HOH . 
H 4 HOH B 20 175 13 HOH HOH . 
H 4 HOH B 21 176 14 HOH HOH . 
H 4 HOH B 22 177 15 HOH HOH . 
H 4 HOH B 23 178 16 HOH HOH . 
H 4 HOH B 24 179 17 HOH HOH . 
H 4 HOH B 25 180 18 HOH HOH . 
H 4 HOH B 26 181 19 HOH HOH . 
H 4 HOH B 27 182 20 HOH HOH . 
H 4 HOH B 28 183 21 HOH HOH . 
H 4 HOH B 29 184 22 HOH HOH . 
H 4 HOH B 30 185 23 HOH HOH . 
H 4 HOH B 31 186 24 HOH HOH . 
H 4 HOH B 32 187 25 HOH HOH . 
H 4 HOH B 33 188 26 HOH HOH . 
H 4 HOH B 34 189 27 HOH HOH . 
H 4 HOH B 35 190 28 HOH HOH . 
H 4 HOH B 36 191 29 HOH HOH . 
H 4 HOH B 37 192 30 HOH HOH . 
H 4 HOH B 38 193 31 HOH HOH . 
H 4 HOH B 39 194 32 HOH HOH . 
H 4 HOH B 40 195 33 HOH HOH . 
H 4 HOH B 41 196 34 HOH HOH . 
H 4 HOH B 42 197 35 HOH HOH . 
H 4 HOH B 43 198 36 HOH HOH . 
H 4 HOH B 44 199 37 HOH HOH . 
H 4 HOH B 45 200 38 HOH HOH . 
H 4 HOH B 46 201 39 HOH HOH . 
H 4 HOH B 47 202 40 HOH HOH . 
H 4 HOH B 48 203 41 HOH HOH . 
H 4 HOH B 49 204 42 HOH HOH . 
H 4 HOH B 50 205 43 HOH HOH . 
H 4 HOH B 51 206 44 HOH HOH . 
H 4 HOH B 52 207 45 HOH HOH . 
H 4 HOH B 53 208 46 HOH HOH . 
H 4 HOH B 54 209 47 HOH HOH . 
H 4 HOH B 55 210 48 HOH HOH . 
H 4 HOH B 56 211 49 HOH HOH . 
H 4 HOH B 57 212 50 HOH HOH . 
H 4 HOH B 58 213 51 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C CMO . . . F 3 12.988 -16.534 52.536 1 13.13 ? C CMO 155 B 1 
HETATM 2 O O CMO . . . F 3 12.105 -16.764 53.31 1 13.3 ? O CMO 155 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           2 
#