data_1YCL
#
_model_server_result.job_id            lx-7eWhrYNf0sz4AzYq3Qw 
_model_server_result.datetime_utc      '2024-11-18 08:37:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ycl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":601}' 
#
_entry.id    1YCL 
#
_exptl.entry_id    1YCL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1YCL 
_cell.length_a            62.53 
_cell.length_b            62.53 
_cell.length_c            149.65 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1YCL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -31.265 54.152568 -24.941667 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 53 A HIS 54 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
metalc ? metalc2 A NE2 HIS 57 A HIS 58 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
metalc ? metalc3 A SG CYS 125 A CYS 126 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? 
metalc ? metalc4 D O2 KRI . A KRI 401 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 323 n n 
S O2 SO4 doub 324 n n 
S O3 SO4 sing 325 n n 
S O4 SO4 sing 326 n n 
#
_atom_sites.entry_id                     1YCL 
_atom_sites.fract_transf_matrix[1][1]    0.015992 
_atom_sites.fract_transf_matrix[1][2]    0.009233 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018466 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006682 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CO A 1 501 501 CO CO2 . 
C 3 SO4 A 1 601 601 SO4 SO4 . 
D 4 KRI A 1 401 401 KRI KRI . 
E 5 HOH A 1 200 200 HOH WAT . 
E 5 HOH A 2 201 201 HOH WAT . 
E 5 HOH A 3 202 202 HOH WAT . 
E 5 HOH A 4 203 203 HOH WAT . 
E 5 HOH A 5 204 204 HOH WAT . 
E 5 HOH A 6 205 205 HOH WAT . 
E 5 HOH A 7 206 206 HOH WAT . 
E 5 HOH A 8 207 207 HOH WAT . 
E 5 HOH A 9 208 208 HOH WAT . 
E 5 HOH A 10 209 209 HOH WAT . 
E 5 HOH A 11 210 210 HOH WAT . 
E 5 HOH A 12 211 211 HOH WAT . 
E 5 HOH A 13 212 212 HOH WAT . 
E 5 HOH A 14 213 213 HOH WAT . 
E 5 HOH A 15 214 214 HOH WAT . 
E 5 HOH A 16 215 215 HOH WAT . 
E 5 HOH A 17 216 216 HOH WAT . 
E 5 HOH A 18 217 217 HOH WAT . 
E 5 HOH A 19 218 218 HOH WAT . 
E 5 HOH A 20 219 219 HOH WAT . 
E 5 HOH A 21 220 220 HOH WAT . 
E 5 HOH A 22 221 221 HOH WAT . 
E 5 HOH A 23 222 222 HOH WAT . 
E 5 HOH A 24 223 223 HOH WAT . 
E 5 HOH A 25 224 224 HOH WAT . 
E 5 HOH A 26 225 225 HOH WAT . 
E 5 HOH A 27 226 226 HOH WAT . 
E 5 HOH A 28 227 227 HOH WAT . 
E 5 HOH A 29 228 228 HOH WAT . 
E 5 HOH A 30 229 229 HOH WAT . 
E 5 HOH A 31 230 230 HOH WAT . 
E 5 HOH A 32 231 231 HOH WAT . 
E 5 HOH A 33 232 232 HOH WAT . 
E 5 HOH A 34 233 233 HOH WAT . 
E 5 HOH A 35 234 234 HOH WAT . 
E 5 HOH A 36 235 235 HOH WAT . 
E 5 HOH A 37 236 236 HOH WAT . 
E 5 HOH A 38 237 237 HOH WAT . 
E 5 HOH A 39 238 238 HOH WAT . 
E 5 HOH A 40 239 239 HOH WAT . 
E 5 HOH A 41 240 240 HOH WAT . 
E 5 HOH A 42 241 241 HOH WAT . 
E 5 HOH A 43 242 242 HOH WAT . 
E 5 HOH A 44 243 243 HOH WAT . 
E 5 HOH A 45 244 244 HOH WAT . 
E 5 HOH A 46 245 245 HOH WAT . 
E 5 HOH A 47 246 246 HOH WAT . 
E 5 HOH A 48 247 247 HOH WAT . 
E 5 HOH A 49 248 248 HOH WAT . 
E 5 HOH A 50 249 249 HOH WAT . 
E 5 HOH A 51 250 250 HOH WAT . 
E 5 HOH A 52 251 251 HOH WAT . 
E 5 HOH A 53 252 252 HOH WAT . 
E 5 HOH A 54 253 253 HOH WAT . 
E 5 HOH A 55 254 254 HOH WAT . 
E 5 HOH A 56 255 255 HOH WAT . 
E 5 HOH A 57 256 256 HOH WAT . 
E 5 HOH A 58 257 257 HOH WAT . 
E 5 HOH A 59 258 258 HOH WAT . 
E 5 HOH A 60 259 259 HOH WAT . 
E 5 HOH A 61 260 260 HOH WAT . 
E 5 HOH A 62 261 261 HOH WAT . 
E 5 HOH A 63 262 262 HOH WAT . 
E 5 HOH A 64 263 263 HOH WAT . 
E 5 HOH A 65 264 264 HOH WAT . 
E 5 HOH A 66 265 265 HOH WAT . 
E 5 HOH A 67 266 266 HOH WAT . 
E 5 HOH A 68 267 267 HOH WAT . 
E 5 HOH A 69 268 268 HOH WAT . 
E 5 HOH A 70 269 269 HOH WAT . 
E 5 HOH A 71 270 270 HOH WAT . 
E 5 HOH A 72 271 271 HOH WAT . 
E 5 HOH A 73 272 272 HOH WAT . 
E 5 HOH A 74 273 273 HOH WAT . 
E 5 HOH A 75 274 274 HOH WAT . 
E 5 HOH A 76 275 275 HOH WAT . 
E 5 HOH A 77 276 276 HOH WAT . 
E 5 HOH A 78 277 277 HOH WAT . 
E 5 HOH A 79 278 278 HOH WAT . 
E 5 HOH A 80 279 279 HOH WAT . 
E 5 HOH A 81 280 280 HOH WAT . 
E 5 HOH A 82 281 281 HOH WAT . 
E 5 HOH A 83 282 282 HOH WAT . 
E 5 HOH A 84 283 283 HOH WAT . 
E 5 HOH A 85 284 284 HOH WAT . 
E 5 HOH A 86 285 285 HOH WAT . 
E 5 HOH A 87 286 286 HOH WAT . 
E 5 HOH A 88 287 287 HOH WAT . 
E 5 HOH A 89 288 288 HOH WAT . 
E 5 HOH A 90 289 289 HOH WAT . 
E 5 HOH A 91 290 290 HOH WAT . 
E 5 HOH A 92 291 291 HOH WAT . 
E 5 HOH A 93 292 292 HOH WAT . 
E 5 HOH A 94 293 293 HOH WAT . 
E 5 HOH A 95 294 294 HOH WAT . 
E 5 HOH A 96 295 295 HOH WAT . 
E 5 HOH A 97 296 296 HOH WAT . 
E 5 HOH A 98 297 297 HOH WAT . 
E 5 HOH A 99 298 298 HOH WAT . 
E 5 HOH A 100 299 299 HOH WAT . 
E 5 HOH A 101 300 300 HOH WAT . 
E 5 HOH A 102 301 301 HOH WAT . 
E 5 HOH A 103 302 302 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . C 3 -39.849 22.409 -4.94 1 42.56 ? S SO4 601 A 1 
HETATM 2 O O1 SO4 . . . C 3 -38.234 22.488 -4.852 1 45.82 ? O1 SO4 601 A 1 
HETATM 3 O O2 SO4 . . . C 3 -40.247 23.597 -5.663 1 43.57 ? O2 SO4 601 A 1 
HETATM 4 O O3 SO4 . . . C 3 -40.211 21.302 -5.529 1 43.45 ? O3 SO4 601 A 1 
HETATM 5 O O4 SO4 . . . C 3 -40.246 22.542 -3.566 1 45.33 ? O4 SO4 601 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           5 
#