data_1YCO
#
_model_server_result.job_id            uv4GL_4DGQIl7SfxxooTKw 
_model_server_result.datetime_utc      '2024-11-24 15:32:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1yco 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":9001}' 
#
_entry.id    1YCO 
#
_exptl.entry_id    1YCO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1YCO 
_cell.length_a            61.165 
_cell.length_b            61.165 
_cell.length_c            317.995 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1YCO 
_symmetry.cell_setting             tetragonal 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 260 n n 
P O2 PO4 sing 261 n n 
P O3 PO4 sing 262 n n 
P O4 PO4 sing 263 n n 
#
_atom_sites.entry_id                     1YCO 
_atom_sites.fract_transf_matrix[1][1]    0.016349 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016349 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003145 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PO4 A 1 5001 5001 PO4 PO4 . 
D 2 PO4 B 1 9001 9001 PO4 PO4 . 
E 3 HOH A 1 5002 1 HOH HOH . 
E 3 HOH A 2 5003 2 HOH HOH . 
E 3 HOH A 3 5004 3 HOH HOH . 
E 3 HOH A 4 5005 6 HOH HOH . 
E 3 HOH A 5 5006 7 HOH HOH . 
E 3 HOH A 6 5007 8 HOH HOH . 
E 3 HOH A 7 5008 10 HOH HOH . 
E 3 HOH A 8 5009 11 HOH HOH . 
E 3 HOH A 9 5010 16 HOH HOH . 
E 3 HOH A 10 5011 18 HOH HOH . 
E 3 HOH A 11 5012 19 HOH HOH . 
E 3 HOH A 12 5013 20 HOH HOH . 
E 3 HOH A 13 5014 21 HOH HOH . 
E 3 HOH A 14 5015 22 HOH HOH . 
E 3 HOH A 15 5016 25 HOH HOH . 
E 3 HOH A 16 5017 26 HOH HOH . 
E 3 HOH A 17 5018 27 HOH HOH . 
E 3 HOH A 18 5019 28 HOH HOH . 
E 3 HOH A 19 5020 30 HOH HOH . 
E 3 HOH A 20 5021 32 HOH HOH . 
E 3 HOH A 21 5022 33 HOH HOH . 
E 3 HOH A 22 5023 34 HOH HOH . 
E 3 HOH A 23 5024 37 HOH HOH . 
E 3 HOH A 24 5025 41 HOH HOH . 
E 3 HOH A 25 5026 49 HOH HOH . 
E 3 HOH A 26 5027 50 HOH HOH . 
E 3 HOH A 27 5028 51 HOH HOH . 
E 3 HOH A 28 5029 52 HOH HOH . 
E 3 HOH A 29 5030 53 HOH HOH . 
E 3 HOH A 30 5031 54 HOH HOH . 
E 3 HOH A 31 5032 55 HOH HOH . 
E 3 HOH A 32 5033 56 HOH HOH . 
E 3 HOH A 33 5034 57 HOH HOH . 
E 3 HOH A 34 5035 58 HOH HOH . 
E 3 HOH A 35 5036 59 HOH HOH . 
E 3 HOH A 36 5037 60 HOH HOH . 
E 3 HOH A 37 5038 61 HOH HOH . 
E 3 HOH A 38 5039 62 HOH HOH . 
E 3 HOH A 39 5040 64 HOH HOH . 
E 3 HOH A 40 5041 65 HOH HOH . 
E 3 HOH A 41 5042 66 HOH HOH . 
E 3 HOH A 42 5043 67 HOH HOH . 
E 3 HOH A 43 5044 70 HOH HOH . 
E 3 HOH A 44 5045 71 HOH HOH . 
E 3 HOH A 45 5046 72 HOH HOH . 
E 3 HOH A 46 5047 73 HOH HOH . 
E 3 HOH A 47 5048 74 HOH HOH . 
E 3 HOH A 48 5049 75 HOH HOH . 
E 3 HOH A 49 5050 91 HOH HOH . 
E 3 HOH A 50 5051 94 HOH HOH . 
E 3 HOH A 51 5052 95 HOH HOH . 
E 3 HOH A 52 5053 96 HOH HOH . 
E 3 HOH A 53 5054 97 HOH HOH . 
E 3 HOH A 54 5055 98 HOH HOH . 
E 3 HOH A 55 5056 100 HOH HOH . 
E 3 HOH A 56 5057 101 HOH HOH . 
E 3 HOH A 57 5058 104 HOH HOH . 
E 3 HOH A 58 5059 105 HOH HOH . 
E 3 HOH A 59 5060 106 HOH HOH . 
E 3 HOH A 60 5061 107 HOH HOH . 
E 3 HOH A 61 5062 109 HOH HOH . 
E 3 HOH A 62 5063 110 HOH HOH . 
E 3 HOH A 63 5064 111 HOH HOH . 
E 3 HOH A 64 5065 112 HOH HOH . 
E 3 HOH A 65 5066 113 HOH HOH . 
E 3 HOH A 66 5067 118 HOH HOH . 
E 3 HOH A 67 5068 119 HOH HOH . 
E 3 HOH A 68 5069 120 HOH HOH . 
E 3 HOH A 69 5070 124 HOH HOH . 
E 3 HOH A 70 5071 130 HOH HOH . 
E 3 HOH A 71 5072 131 HOH HOH . 
E 3 HOH A 72 5073 135 HOH HOH . 
E 3 HOH A 73 5074 136 HOH HOH . 
E 3 HOH A 74 5075 141 HOH HOH . 
E 3 HOH A 75 5076 142 HOH HOH . 
E 3 HOH A 76 5077 147 HOH HOH . 
E 3 HOH A 77 5078 152 HOH HOH . 
E 3 HOH A 78 5079 153 HOH HOH . 
E 3 HOH A 79 5080 154 HOH HOH . 
E 3 HOH A 80 5081 163 HOH HOH . 
E 3 HOH A 81 5082 164 HOH HOH . 
E 3 HOH A 82 5083 165 HOH HOH . 
E 3 HOH A 83 5084 166 HOH HOH . 
E 3 HOH A 84 5085 167 HOH HOH . 
E 3 HOH A 85 5086 168 HOH HOH . 
E 3 HOH A 86 5087 169 HOH HOH . 
E 3 HOH A 87 5088 170 HOH HOH . 
F 3 HOH B 1 9002 4 HOH HOH . 
F 3 HOH B 2 9003 5 HOH HOH . 
F 3 HOH B 3 9004 9 HOH HOH . 
F 3 HOH B 4 9005 12 HOH HOH . 
F 3 HOH B 5 9006 13 HOH HOH . 
F 3 HOH B 6 9007 14 HOH HOH . 
F 3 HOH B 7 9008 15 HOH HOH . 
F 3 HOH B 8 9009 17 HOH HOH . 
F 3 HOH B 9 9010 23 HOH HOH . 
F 3 HOH B 10 9011 24 HOH HOH . 
F 3 HOH B 11 9012 29 HOH HOH . 
F 3 HOH B 12 9013 31 HOH HOH . 
F 3 HOH B 13 9014 35 HOH HOH . 
F 3 HOH B 14 9015 36 HOH HOH . 
F 3 HOH B 15 9016 38 HOH HOH . 
F 3 HOH B 16 9017 39 HOH HOH . 
F 3 HOH B 17 9018 40 HOH HOH . 
F 3 HOH B 18 9019 42 HOH HOH . 
F 3 HOH B 19 9020 43 HOH HOH . 
F 3 HOH B 20 9021 44 HOH HOH . 
F 3 HOH B 21 9022 45 HOH HOH . 
F 3 HOH B 22 9023 46 HOH HOH . 
F 3 HOH B 23 9024 47 HOH HOH . 
F 3 HOH B 24 9025 48 HOH HOH . 
F 3 HOH B 25 9026 63 HOH HOH . 
F 3 HOH B 26 9027 68 HOH HOH . 
F 3 HOH B 27 9028 69 HOH HOH . 
F 3 HOH B 28 9029 76 HOH HOH . 
F 3 HOH B 29 9030 77 HOH HOH . 
F 3 HOH B 30 9031 78 HOH HOH . 
F 3 HOH B 31 9032 79 HOH HOH . 
F 3 HOH B 32 9033 80 HOH HOH . 
F 3 HOH B 33 9034 81 HOH HOH . 
F 3 HOH B 34 9035 82 HOH HOH . 
F 3 HOH B 35 9036 83 HOH HOH . 
F 3 HOH B 36 9037 84 HOH HOH . 
F 3 HOH B 37 9038 85 HOH HOH . 
F 3 HOH B 38 9039 86 HOH HOH . 
F 3 HOH B 39 9040 87 HOH HOH . 
F 3 HOH B 40 9041 88 HOH HOH . 
F 3 HOH B 41 9042 89 HOH HOH . 
F 3 HOH B 42 9043 90 HOH HOH . 
F 3 HOH B 43 9044 92 HOH HOH . 
F 3 HOH B 44 9045 93 HOH HOH . 
F 3 HOH B 45 9046 99 HOH HOH . 
F 3 HOH B 46 9047 102 HOH HOH . 
F 3 HOH B 47 9048 103 HOH HOH . 
F 3 HOH B 48 9049 108 HOH HOH . 
F 3 HOH B 49 9050 114 HOH HOH . 
F 3 HOH B 50 9051 115 HOH HOH . 
F 3 HOH B 51 9052 116 HOH HOH . 
F 3 HOH B 52 9053 117 HOH HOH . 
F 3 HOH B 53 9054 121 HOH HOH . 
F 3 HOH B 54 9055 122 HOH HOH . 
F 3 HOH B 55 9056 123 HOH HOH . 
F 3 HOH B 56 9057 125 HOH HOH . 
F 3 HOH B 57 9058 126 HOH HOH . 
F 3 HOH B 58 9059 127 HOH HOH . 
F 3 HOH B 59 9060 128 HOH HOH . 
F 3 HOH B 60 9061 129 HOH HOH . 
F 3 HOH B 61 9062 132 HOH HOH . 
F 3 HOH B 62 9063 133 HOH HOH . 
F 3 HOH B 63 9064 134 HOH HOH . 
F 3 HOH B 64 9065 137 HOH HOH . 
F 3 HOH B 65 9066 138 HOH HOH . 
F 3 HOH B 66 9067 139 HOH HOH . 
F 3 HOH B 67 9068 140 HOH HOH . 
F 3 HOH B 68 9069 143 HOH HOH . 
F 3 HOH B 69 9070 144 HOH HOH . 
F 3 HOH B 70 9071 145 HOH HOH . 
F 3 HOH B 71 9072 146 HOH HOH . 
F 3 HOH B 72 9073 148 HOH HOH . 
F 3 HOH B 73 9074 149 HOH HOH . 
F 3 HOH B 74 9075 150 HOH HOH . 
F 3 HOH B 75 9076 151 HOH HOH . 
F 3 HOH B 76 9077 155 HOH HOH . 
F 3 HOH B 77 9078 156 HOH HOH . 
F 3 HOH B 78 9079 157 HOH HOH . 
F 3 HOH B 79 9080 158 HOH HOH . 
F 3 HOH B 80 9081 159 HOH HOH . 
F 3 HOH B 81 9082 160 HOH HOH . 
F 3 HOH B 82 9083 161 HOH HOH . 
F 3 HOH B 83 9084 162 HOH HOH . 
F 3 HOH B 84 9085 171 HOH HOH . 
F 3 HOH B 85 9086 172 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . D 2 13.83 50.991 120.587 1 78.25 ? P PO4 9001 B 1 
HETATM 2 O O1 PO4 . . . D 2 13.326 49.682 120.073 1 77.22 ? O1 PO4 9001 B 1 
HETATM 3 O O2 PO4 . . . D 2 14.74 51.601 119.577 1 77.91 ? O2 PO4 9001 B 1 
HETATM 4 O O3 PO4 . . . D 2 12.681 51.902 120.833 1 76.11 ? O3 PO4 9001 B 1 
HETATM 5 O O4 PO4 . . . D 2 14.574 50.779 121.862 1 76.25 ? O4 PO4 9001 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           421 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           5 
#