data_1YDS # _model_server_result.job_id oETXscNd5O2SykJ11c65iA _model_server_result.datetime_utc '2024-11-24 06:11:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1yds # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":351}' # _entry.id 1YDS # _exptl.entry_id 1YDS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 265.331 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[2-(METHYLAMINO)ETHYL]-5-ISOQUINOLINESULFONAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1YDS _cell.length_a 73.38 _cell.length_b 76.2 _cell.length_c 80.52 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YDS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TRP 196 E TRP 196 1_555 A N TPO 197 E TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale2 A C TPO 197 E TPO 197 1_555 A N LEU 198 E LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C VAL 337 E VAL 337 1_555 A N SEP 338 E SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C SEP 338 E SEP 338 1_555 A N ILE 339 E ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C12 H15 N3 O2 S' _chem_comp.formula_weight 265.331 _chem_comp.id IQS _chem_comp.mon_nstd_flag . _chem_comp.name N-[2-(METHYLAMINO)ETHYL]-5-ISOQUINOLINESULFONAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms H-8 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IQS doub 173 n y C1 C10 IQS sing 174 n y C1 S IQS sing 175 n n C2 C3 IQS sing 176 n y C2 H2 IQS sing 177 n n C3 C4 IQS doub 178 n y C3 H3 IQS sing 179 n n C4 C5 IQS sing 180 n y C4 H4 IQS sing 181 n n C5 C6 IQS sing 182 n y C5 C10 IQS doub 183 n y C6 N7 IQS doub 184 n y C6 H6 IQS sing 185 n n N7 C8 IQS sing 186 n y C8 C9 IQS doub 187 n y C8 H8 IQS sing 188 n n C9 C10 IQS sing 189 n y C9 H9 IQS sing 190 n n S O1 IQS doub 191 n n S O2 IQS doub 192 n n S N1' IQS sing 193 n n N1' C2' IQS sing 194 n n N1' HN1 IQS sing 195 n n C2' C3' IQS sing 196 n n C2' "H2'1" IQS sing 197 n n C2' "H2'2" IQS sing 198 n n C3' N4' IQS sing 199 n n C3' "H3'1" IQS sing 200 n n C3' "H3'2" IQS sing 201 n n N4' C5' IQS sing 202 n n N4' HN4 IQS sing 203 n n C5' "H5'1" IQS sing 204 n n C5' "H5'2" IQS sing 205 n n C5' "H5'3" IQS sing 206 n n # _atom_sites.entry_id 1YDS _atom_sites.fract_transf_matrix[1][1] 0.013628 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013123 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012419 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 IQS E 1 351 1 IQS IQS . D 4 HOH E 1 400 400 HOH HOH . D 4 HOH E 2 401 401 HOH HOH . D 4 HOH E 3 402 402 HOH HOH . D 4 HOH E 4 403 403 HOH HOH . D 4 HOH E 5 404 404 HOH HOH . D 4 HOH E 6 405 405 HOH HOH . D 4 HOH E 7 406 406 HOH HOH . D 4 HOH E 8 408 408 HOH HOH . D 4 HOH E 9 412 412 HOH HOH . D 4 HOH E 10 414 414 HOH HOH . D 4 HOH E 11 415 415 HOH HOH . D 4 HOH E 12 416 416 HOH HOH . D 4 HOH E 13 417 417 HOH HOH . D 4 HOH E 14 418 418 HOH HOH . D 4 HOH E 15 419 419 HOH HOH . D 4 HOH E 16 420 420 HOH HOH . D 4 HOH E 17 423 423 HOH HOH . D 4 HOH E 18 424 424 HOH HOH . E 4 HOH I 1 407 407 HOH HOH . E 4 HOH I 2 409 409 HOH HOH . E 4 HOH I 3 410 410 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IQS . . . C 3 6.986 10.178 2.989 1 24.22 ? C1 IQS 351 E 1 HETATM 2 C C2 IQS . . . C 3 7.134 10.176 1.59 1 21.55 ? C2 IQS 351 E 1 HETATM 3 C C3 IQS . . . C 3 6.016 10.021 0.752 1 17.91 ? C3 IQS 351 E 1 HETATM 4 C C4 IQS . . . C 3 4.731 9.866 1.274 1 21.21 ? C4 IQS 351 E 1 HETATM 5 C C5 IQS . . . C 3 4.564 9.865 2.671 1 25.62 ? C5 IQS 351 E 1 HETATM 6 C C6 IQS . . . C 3 3.291 9.71 3.219 1 24.22 ? C6 IQS 351 E 1 HETATM 7 N N7 IQS . . . C 3 3.128 9.707 4.575 1 20.7 ? N7 IQS 351 E 1 HETATM 8 C C8 IQS . . . C 3 4.184 9.851 5.399 1 20.87 ? C8 IQS 351 E 1 HETATM 9 C C9 IQS . . . C 3 5.483 10.009 4.918 1 23.78 ? C9 IQS 351 E 1 HETATM 10 C C10 IQS . . . C 3 5.687 10.019 3.534 1 25.03 ? C10 IQS 351 E 1 HETATM 11 S S IQS . . . C 3 8.447 10.374 3.993 1 29.03 ? S IQS 351 E 1 HETATM 12 O O1 IQS . . . C 3 8.15 11.422 4.935 1 31.1 ? O1 IQS 351 E 1 HETATM 13 O O2 IQS . . . C 3 9.585 10.481 3.1 1 31.91 ? O2 IQS 351 E 1 HETATM 14 N N1' IQS . . . C 3 8.481 9.007 4.851 1 19.3 ? N1' IQS 351 E 1 HETATM 15 C C2' IQS . . . C 3 9.004 7.742 4.338 1 31.14 ? C2' IQS 351 E 1 HETATM 16 C C3' IQS . . . C 3 9.979 7.939 3.178 1 30.57 ? C3' IQS 351 E 1 HETATM 17 N N4' IQS . . . C 3 11.175 7.099 3.381 1 27.34 ? N4' IQS 351 E 1 HETATM 18 C C5' IQS . . . C 3 12.31 7.996 3.646 1 40.08 ? C5' IQS 351 E 1 # _model_server_stats.io_time_ms 80 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 358 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 18 #