data_1YDX # _model_server_result.job_id DSqw3ADRCAzmUsPHCrSy4w _model_server_result.datetime_utc '2024-10-20 22:46:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ydx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":385}' # _entry.id 1YDX # _exptl.entry_id 1YDX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1YDX _cell.length_a 76.601 _cell.length_b 76.601 _cell.length_c 174.847 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YDX _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 24 A MSE 1 1_555 A N THR 25 A THR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale2 A C GLU 51 A GLU 28 1_555 A N MSE 52 A MSE 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale3 A C MSE 52 A MSE 29 1_555 A N LEU 53 A LEU 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C GLN 223 A GLN 200 1_555 A N MSE 224 A MSE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 A C MSE 224 A MSE 201 1_555 A N HIS 225 A HIS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale6 A C PRO 305 A PRO 282 1_555 A N MSE 306 A MSE 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale7 A C MSE 306 A MSE 283 1_555 A N ASN 307 A ASN 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale8 A C ARG 329 A ARG 306 1_555 A N MSE 330 A MSE 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale9 A C MSE 330 A MSE 307 1_555 A N LYS 331 A LYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale10 A C ASP 395 A ASP 372 1_555 A N MSE 396 A MSE 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale11 A C MSE 396 A MSE 373 1_555 A N THR 397 A THR 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1YDX _atom_sites.fract_transf_matrix[1][1] 0.013055 _atom_sites.fract_transf_matrix[1][2] 0.007537 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015074 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005719 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 384 3 CL CL . C 2 CL A 1 385 16 CL CL . D 3 HOH A 1 386 1 HOH HOH . D 3 HOH A 2 387 2 HOH HOH . D 3 HOH A 3 388 4 HOH HOH . D 3 HOH A 4 389 5 HOH HOH . D 3 HOH A 5 390 6 HOH HOH . D 3 HOH A 6 391 7 HOH HOH . D 3 HOH A 7 392 8 HOH HOH . D 3 HOH A 8 393 9 HOH HOH . D 3 HOH A 9 394 10 HOH HOH . D 3 HOH A 10 395 11 HOH HOH . D 3 HOH A 11 396 12 HOH HOH . D 3 HOH A 12 397 13 HOH HOH . D 3 HOH A 13 398 14 HOH HOH . D 3 HOH A 14 399 15 HOH HOH . D 3 HOH A 15 400 17 HOH HOH . D 3 HOH A 16 401 18 HOH HOH . D 3 HOH A 17 402 19 HOH HOH . D 3 HOH A 18 403 20 HOH HOH . D 3 HOH A 19 404 21 HOH HOH . D 3 HOH A 20 405 22 HOH HOH . D 3 HOH A 21 406 23 HOH HOH . D 3 HOH A 22 407 24 HOH HOH . D 3 HOH A 23 408 25 HOH HOH . D 3 HOH A 24 409 26 HOH HOH . D 3 HOH A 25 410 27 HOH HOH . D 3 HOH A 26 411 28 HOH HOH . D 3 HOH A 27 412 29 HOH HOH . D 3 HOH A 28 413 30 HOH HOH . D 3 HOH A 29 414 31 HOH HOH . D 3 HOH A 30 415 32 HOH HOH . D 3 HOH A 31 416 33 HOH HOH . D 3 HOH A 32 417 34 HOH HOH . D 3 HOH A 33 418 35 HOH HOH . D 3 HOH A 34 419 36 HOH HOH . D 3 HOH A 35 420 37 HOH HOH . D 3 HOH A 36 421 38 HOH HOH . D 3 HOH A 37 422 39 HOH HOH . D 3 HOH A 38 423 40 HOH HOH . D 3 HOH A 39 424 41 HOH HOH . D 3 HOH A 40 425 42 HOH HOH . D 3 HOH A 41 426 43 HOH HOH . D 3 HOH A 42 427 44 HOH HOH . D 3 HOH A 43 428 45 HOH HOH . D 3 HOH A 44 429 46 HOH HOH . D 3 HOH A 45 430 47 HOH HOH . D 3 HOH A 46 431 48 HOH HOH . D 3 HOH A 47 432 49 HOH HOH . D 3 HOH A 48 433 50 HOH HOH . D 3 HOH A 49 434 51 HOH HOH . D 3 HOH A 50 435 52 HOH HOH . D 3 HOH A 51 436 53 HOH HOH . D 3 HOH A 52 437 54 HOH HOH . D 3 HOH A 53 438 55 HOH HOH . D 3 HOH A 54 439 56 HOH HOH . D 3 HOH A 55 440 57 HOH HOH . D 3 HOH A 56 441 58 HOH HOH . D 3 HOH A 57 442 59 HOH HOH . D 3 HOH A 58 443 60 HOH HOH . D 3 HOH A 59 444 61 HOH HOH . D 3 HOH A 60 445 62 HOH HOH . D 3 HOH A 61 446 63 HOH HOH . D 3 HOH A 62 447 64 HOH HOH . D 3 HOH A 63 448 65 HOH HOH . D 3 HOH A 64 449 66 HOH HOH . D 3 HOH A 65 450 67 HOH HOH . D 3 HOH A 66 451 68 HOH HOH . D 3 HOH A 67 452 69 HOH HOH . D 3 HOH A 68 453 70 HOH HOH . D 3 HOH A 69 454 71 HOH HOH . D 3 HOH A 70 455 72 HOH HOH . D 3 HOH A 71 456 73 HOH HOH . D 3 HOH A 72 457 74 HOH HOH . D 3 HOH A 73 458 75 HOH HOH . D 3 HOH A 74 459 76 HOH HOH . D 3 HOH A 75 460 77 HOH HOH . D 3 HOH A 76 461 78 HOH HOH . D 3 HOH A 77 462 79 HOH HOH . D 3 HOH A 78 463 80 HOH HOH . D 3 HOH A 79 464 81 HOH HOH . D 3 HOH A 80 465 82 HOH HOH . D 3 HOH A 81 466 83 HOH HOH . D 3 HOH A 82 467 84 HOH HOH . D 3 HOH A 83 468 85 HOH HOH . D 3 HOH A 84 469 86 HOH HOH . D 3 HOH A 85 470 87 HOH HOH . D 3 HOH A 86 471 88 HOH HOH . D 3 HOH A 87 472 89 HOH HOH . D 3 HOH A 88 473 90 HOH HOH . D 3 HOH A 89 474 91 HOH HOH . D 3 HOH A 90 475 92 HOH HOH . D 3 HOH A 91 476 93 HOH HOH . D 3 HOH A 92 477 94 HOH HOH . D 3 HOH A 93 478 95 HOH HOH . D 3 HOH A 94 479 96 HOH HOH . D 3 HOH A 95 480 97 HOH HOH . D 3 HOH A 96 481 98 HOH HOH . D 3 HOH A 97 482 99 HOH HOH . D 3 HOH A 98 483 100 HOH HOH . D 3 HOH A 99 484 101 HOH HOH . D 3 HOH A 100 485 102 HOH HOH . D 3 HOH A 101 486 103 HOH HOH . D 3 HOH A 102 487 104 HOH HOH . D 3 HOH A 103 488 105 HOH HOH . D 3 HOH A 104 489 106 HOH HOH . D 3 HOH A 105 490 107 HOH HOH . D 3 HOH A 106 491 108 HOH HOH . D 3 HOH A 107 492 109 HOH HOH . D 3 HOH A 108 493 110 HOH HOH . D 3 HOH A 109 494 111 HOH HOH . D 3 HOH A 110 495 112 HOH HOH . D 3 HOH A 111 496 113 HOH HOH . D 3 HOH A 112 497 114 HOH HOH . D 3 HOH A 113 498 115 HOH HOH . D 3 HOH A 114 499 116 HOH HOH . D 3 HOH A 115 500 117 HOH HOH . D 3 HOH A 116 501 118 HOH HOH . D 3 HOH A 117 502 119 HOH HOH . D 3 HOH A 118 503 120 HOH HOH . D 3 HOH A 119 504 121 HOH HOH . D 3 HOH A 120 505 122 HOH HOH . D 3 HOH A 121 506 123 HOH HOH . D 3 HOH A 122 507 124 HOH HOH . D 3 HOH A 123 508 125 HOH HOH . D 3 HOH A 124 509 126 HOH HOH . D 3 HOH A 125 510 127 HOH HOH . D 3 HOH A 126 511 128 HOH HOH . D 3 HOH A 127 512 129 HOH HOH . D 3 HOH A 128 513 130 HOH HOH . D 3 HOH A 129 514 131 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 14.918 _atom_site.Cartn_y 41.501 _atom_site.Cartn_z 30.328 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 50.55 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 385 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #