data_1YEB # _model_server_result.job_id ufqbFatuJHjY9KK6jifNxw _model_server_result.datetime_utc '2024-11-26 23:11:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1yeb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":105}' # _entry.id 1YEB # _exptl.entry_id 1YEB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1YEB _cell.length_a 36.39 _cell.length_b 36.39 _cell.length_c 137.28 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YEB _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_465 y-1,x+1,-z 0 1 0 1 0 0 0 0 -1 -36.39 36.39 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 19 A CYS 14 1_555 C CAB HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.749 ? covale ? covale2 A SG CYS 22 A CYS 17 1_555 C CAC HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.828 ? covale ? covale3 A C PRO 76 A PRO 71 1_555 A N M3L 77 A M3L 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale4 A C M3L 77 A M3L 72 1_555 A N LYS 78 A LYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? metalc ? metalc1 A NE2 HIS 23 A HIS 18 1_555 C FE HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc2 A SD MET 85 A MET 80 1_555 C FE HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1YEB _atom_sites.fract_transf_matrix[1][1] 0.02748 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02748 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007284 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 105 105 SO4 SO4 . C 3 HEC A 1 104 104 HEC HEM . D 4 HOH A 1 106 106 HOH HOH . D 4 HOH A 2 107 107 HOH HOH . D 4 HOH A 3 108 108 HOH HOH . D 4 HOH A 4 109 109 HOH HOH . D 4 HOH A 5 110 110 HOH HOH . D 4 HOH A 6 111 111 HOH HOH . D 4 HOH A 7 112 112 HOH HOH . D 4 HOH A 8 113 113 HOH HOH . D 4 HOH A 9 114 114 HOH HOH . D 4 HOH A 10 115 115 HOH HOH . D 4 HOH A 11 116 116 HOH HOH . D 4 HOH A 12 117 117 HOH HOH . D 4 HOH A 13 118 118 HOH HOH . D 4 HOH A 14 119 119 HOH HOH . D 4 HOH A 15 120 120 HOH HOH . D 4 HOH A 16 121 121 HOH HOH . D 4 HOH A 17 122 122 HOH HOH . D 4 HOH A 18 123 123 HOH HOH . D 4 HOH A 19 124 124 HOH HOH . D 4 HOH A 20 125 125 HOH HOH . D 4 HOH A 21 126 126 HOH HOH . D 4 HOH A 22 127 127 HOH HOH . D 4 HOH A 23 128 128 HOH HOH . D 4 HOH A 24 129 129 HOH HOH . D 4 HOH A 25 130 130 HOH HOH . D 4 HOH A 26 131 131 HOH HOH . D 4 HOH A 27 132 132 HOH HOH . D 4 HOH A 28 133 133 HOH HOH . D 4 HOH A 29 134 134 HOH HOH . D 4 HOH A 30 135 135 HOH HOH . D 4 HOH A 31 136 136 HOH HOH . D 4 HOH A 32 137 137 HOH HOH . D 4 HOH A 33 138 138 HOH HOH . D 4 HOH A 34 139 139 HOH HOH . D 4 HOH A 35 140 140 HOH HOH . D 4 HOH A 36 141 141 HOH HOH . D 4 HOH A 37 142 142 HOH HOH . D 4 HOH A 38 143 143 HOH HOH . D 4 HOH A 39 144 144 HOH HOH . D 4 HOH A 40 145 145 HOH HOH . D 4 HOH A 41 146 146 HOH HOH . D 4 HOH A 42 147 147 HOH HOH . D 4 HOH A 43 148 148 HOH HOH . D 4 HOH A 44 149 149 HOH HOH . D 4 HOH A 45 150 150 HOH HOH . D 4 HOH A 46 151 151 HOH HOH . D 4 HOH A 47 152 152 HOH HOH . D 4 HOH A 48 153 153 HOH HOH . D 4 HOH A 49 154 154 HOH HOH . D 4 HOH A 50 155 155 HOH HOH . D 4 HOH A 51 156 156 HOH HOH . D 4 HOH A 52 157 157 HOH HOH . D 4 HOH A 53 158 158 HOH HOH . D 4 HOH A 54 159 159 HOH HOH . D 4 HOH A 55 160 160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 1.882 31.196 -7.846 1 39.93 ? S SO4 105 A 1 HETATM 2 O O1 SO4 . . . B 2 2.279 32.403 -8.645 1 40.78 ? O1 SO4 105 A 1 HETATM 3 O O2 SO4 . . . B 2 2.602 30.004 -8.357 1 40.65 ? O2 SO4 105 A 1 HETATM 4 O O3 SO4 . . . B 2 2.253 31.464 -6.418 1 40.41 ? O3 SO4 105 A 1 HETATM 5 O O4 SO4 . . . B 2 0.4 30.991 -7.949 1 40.37 ? O4 SO4 105 A 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 79 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #