data_1YEG # _model_server_result.job_id E5OT9caw86TH3hS5sVxCRg _model_server_result.datetime_utc '2025-02-26 19:23:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1yeg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":220}' # _entry.id 1YEG # _exptl.entry_id 1YEG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1YEG _cell.length_a 78.55 _cell.length_b 78.55 _cell.length_c 159.5 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YEG _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M 1 1 A,C,D,E,F,G,H,I,J,L 2 1 B,K,M 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_665 x-y+1,-y+1,-z+2/3 1 0 0 0 -1 0 0 0 -1 39.275 68.026295 106.333333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 93 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf2 A SG CYS 139 L CYS 134 1_555 A SG CYS 199 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 150 H CYS 140 1_555 B SG CYS 205 H CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc1 A NE2 HIS 54 L HIS 49 1_555 E ZN ZN . L ZN 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc2 A OD2 ASP 65 L ASP 60 4_456 I ZN ZN . L ZN 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc3 A ND1 HIS 98 L HIS 93 1_555 F ZN ZN . L ZN 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc4 A OD2 ASP 156 L ASP 151 1_555 G ZN ZN . L ZN 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.952 ? metalc ? metalc5 A ND1 HIS 194 L HIS 189 1_555 G ZN ZN . L ZN 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc6 C ZN ZN . L ZN 215 1_555 L O HOH . L HOH 598 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.758 ? metalc ? metalc7 C ZN ZN . L ZN 215 1_555 L O HOH . L HOH 599 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.614 ? metalc ? metalc8 D ZN ZN . L ZN 216 1_555 L O HOH . L HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.85 ? metalc ? metalc9 D ZN ZN . L ZN 216 1_555 L O HOH . L HOH 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.729 ? metalc ? metalc10 D ZN ZN . L ZN 216 1_555 L O HOH . L HOH 638 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.716 ? metalc ? metalc11 E ZN ZN . L ZN 217 1_555 B OD1 ASP 107 H ASP 100 1_555 ? ? ? C ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc12 E ZN ZN . L ZN 217 1_555 M O HOH . H HOH 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.728 ? metalc ? metalc13 E ZN ZN . L ZN 217 1_555 M O HOH . H HOH 587 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.577 ? metalc ? metalc14 F ZN ZN . L ZN 218 1_555 L O HOH . L HOH 586 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.627 ? metalc ? metalc15 F ZN ZN . L ZN 218 1_555 L O HOH . L HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.742 ? metalc ? metalc16 F ZN ZN . L ZN 218 1_555 B OD1 ASP 183 H ASP 181 5_665 ? ? ? ? ? ? ? ? ? ? ? ? 1.789 ? metalc ? metalc17 G ZN ZN . L ZN 219 1_555 L O HOH . L HOH 584 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.755 ? metalc ? metalc18 G ZN ZN . L ZN 219 1_555 L O HOH . L HOH 598 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc19 H ZN ZN . L ZN 220 1_555 L O HOH . L HOH 584 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.848 ? metalc ? metalc20 H ZN ZN . L ZN 220 1_555 L O HOH . L HOH 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.745 ? metalc ? metalc21 H ZN ZN . L ZN 220 1_555 L O HOH . L HOH 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.87 ? metalc ? metalc22 H ZN ZN . L ZN 220 1_555 L O HOH . L HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.64 ? metalc ? metalc23 I ZN ZN . L ZN 221 1_555 L O HOH . L HOH 599 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? metalc ? metalc24 I ZN ZN . L ZN 221 1_555 L O HOH . L HOH 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.928 ? metalc ? metalc25 I ZN ZN . L ZN 221 1_555 L O HOH . L HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? metalc ? metalc26 I ZN ZN . L ZN 221 1_555 L O HOH . L HOH 632 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1YEG _atom_sites.fract_transf_matrix[1][1] 0.012731 _atom_sites.fract_transf_matrix[1][2] 0.00735 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0147 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00627 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN L 1 215 1 ZN ZN . D 3 ZN L 1 216 2 ZN ZN . E 3 ZN L 1 217 3 ZN ZN . F 3 ZN L 1 218 4 ZN ZN . G 3 ZN L 1 219 5 ZN ZN . H 3 ZN L 1 220 6 ZN ZN . I 3 ZN L 1 221 7 ZN ZN . J 4 BPN L 1 551 551 BPN BPN . K 5 ACT H 1 552 552 ACT ACT . L 6 HOH L 1 552 3 HOH HOH . L 6 HOH L 2 553 6 HOH HOH . L 6 HOH L 3 554 7 HOH HOH . L 6 HOH L 4 555 10 HOH HOH . L 6 HOH L 5 556 16 HOH HOH . L 6 HOH L 6 557 17 HOH HOH . L 6 HOH L 7 558 18 HOH HOH . L 6 HOH L 8 559 20 HOH HOH . L 6 HOH L 9 560 21 HOH HOH . L 6 HOH L 10 561 22 HOH HOH . L 6 HOH L 11 562 23 HOH HOH . L 6 HOH L 12 563 24 HOH HOH . L 6 HOH L 13 564 26 HOH HOH . L 6 HOH L 14 565 28 HOH HOH . L 6 HOH L 15 566 30 HOH HOH . L 6 HOH L 16 567 31 HOH HOH . L 6 HOH L 17 568 34 HOH HOH . L 6 HOH L 18 569 36 HOH HOH . L 6 HOH L 19 570 41 HOH HOH . L 6 HOH L 20 571 43 HOH HOH . L 6 HOH L 21 572 44 HOH HOH . L 6 HOH L 22 573 45 HOH HOH . L 6 HOH L 23 574 46 HOH HOH . L 6 HOH L 24 575 47 HOH HOH . L 6 HOH L 25 576 48 HOH HOH . L 6 HOH L 26 577 50 HOH HOH . L 6 HOH L 27 578 51 HOH HOH . L 6 HOH L 28 579 52 HOH HOH . L 6 HOH L 29 580 53 HOH HOH . L 6 HOH L 30 581 54 HOH HOH . L 6 HOH L 31 582 55 HOH HOH . L 6 HOH L 32 583 57 HOH HOH . L 6 HOH L 33 584 61 HOH HOH . L 6 HOH L 34 585 62 HOH HOH . L 6 HOH L 35 586 63 HOH HOH . L 6 HOH L 36 587 64 HOH HOH . L 6 HOH L 37 588 66 HOH HOH . L 6 HOH L 38 589 69 HOH HOH . L 6 HOH L 39 590 70 HOH HOH . L 6 HOH L 40 591 71 HOH HOH . L 6 HOH L 41 592 77 HOH HOH . L 6 HOH L 42 593 78 HOH HOH . L 6 HOH L 43 594 79 HOH HOH . L 6 HOH L 44 595 82 HOH HOH . L 6 HOH L 45 596 83 HOH HOH . L 6 HOH L 46 597 85 HOH HOH . L 6 HOH L 47 598 87 HOH HOH . L 6 HOH L 48 599 88 HOH HOH . L 6 HOH L 49 600 89 HOH HOH . L 6 HOH L 50 601 91 HOH HOH . L 6 HOH L 51 602 94 HOH HOH . L 6 HOH L 52 603 98 HOH HOH . L 6 HOH L 53 604 100 HOH HOH . L 6 HOH L 54 605 101 HOH HOH . L 6 HOH L 55 606 103 HOH HOH . L 6 HOH L 56 607 104 HOH HOH . L 6 HOH L 57 608 105 HOH HOH . L 6 HOH L 58 609 107 HOH HOH . L 6 HOH L 59 610 109 HOH HOH . L 6 HOH L 60 611 110 HOH HOH . L 6 HOH L 61 612 111 HOH HOH . L 6 HOH L 62 613 112 HOH HOH . L 6 HOH L 63 614 115 HOH HOH . L 6 HOH L 64 615 116 HOH HOH . L 6 HOH L 65 616 119 HOH HOH . L 6 HOH L 66 617 120 HOH HOH . L 6 HOH L 67 618 123 HOH HOH . L 6 HOH L 68 619 125 HOH HOH . L 6 HOH L 69 620 126 HOH HOH . L 6 HOH L 70 621 127 HOH HOH . L 6 HOH L 71 622 128 HOH HOH . L 6 HOH L 72 623 129 HOH HOH . L 6 HOH L 73 624 130 HOH HOH . L 6 HOH L 74 625 132 HOH HOH . L 6 HOH L 75 626 135 HOH HOH . L 6 HOH L 76 627 136 HOH HOH . L 6 HOH L 77 628 137 HOH HOH . L 6 HOH L 78 629 138 HOH HOH . L 6 HOH L 79 630 140 HOH HOH . L 6 HOH L 80 631 141 HOH HOH . L 6 HOH L 81 632 142 HOH HOH . L 6 HOH L 82 633 144 HOH HOH . L 6 HOH L 83 634 145 HOH HOH . L 6 HOH L 84 635 146 HOH HOH . L 6 HOH L 85 636 148 HOH HOH . L 6 HOH L 86 637 149 HOH HOH . L 6 HOH L 87 638 150 HOH HOH . L 6 HOH L 88 639 153 HOH HOH . M 6 HOH H 1 553 1 HOH HOH . M 6 HOH H 2 554 2 HOH HOH . M 6 HOH H 3 555 4 HOH HOH . M 6 HOH H 4 556 5 HOH HOH . M 6 HOH H 5 557 8 HOH HOH . M 6 HOH H 6 558 9 HOH HOH . M 6 HOH H 7 559 11 HOH HOH . M 6 HOH H 8 560 12 HOH HOH . M 6 HOH H 9 561 13 HOH HOH . M 6 HOH H 10 562 14 HOH HOH . M 6 HOH H 11 563 15 HOH HOH . M 6 HOH H 12 564 19 HOH HOH . M 6 HOH H 13 565 25 HOH HOH . M 6 HOH H 14 566 27 HOH HOH . M 6 HOH H 15 567 29 HOH HOH . M 6 HOH H 16 568 32 HOH HOH . M 6 HOH H 17 569 33 HOH HOH . M 6 HOH H 18 570 35 HOH HOH . M 6 HOH H 19 571 37 HOH HOH . M 6 HOH H 20 572 38 HOH HOH . M 6 HOH H 21 573 39 HOH HOH . M 6 HOH H 22 574 40 HOH HOH . M 6 HOH H 23 575 42 HOH HOH . M 6 HOH H 24 576 49 HOH HOH . M 6 HOH H 25 577 56 HOH HOH . M 6 HOH H 26 578 58 HOH HOH . M 6 HOH H 27 579 59 HOH HOH . M 6 HOH H 28 580 60 HOH HOH . M 6 HOH H 29 581 65 HOH HOH . M 6 HOH H 30 582 67 HOH HOH . M 6 HOH H 31 583 68 HOH HOH . M 6 HOH H 32 584 72 HOH HOH . M 6 HOH H 33 585 73 HOH HOH . M 6 HOH H 34 586 74 HOH HOH . M 6 HOH H 35 587 75 HOH HOH . M 6 HOH H 36 588 76 HOH HOH . M 6 HOH H 37 589 80 HOH HOH . M 6 HOH H 38 590 81 HOH HOH . M 6 HOH H 39 591 84 HOH HOH . M 6 HOH H 40 592 86 HOH HOH . M 6 HOH H 41 593 90 HOH HOH . M 6 HOH H 42 594 92 HOH HOH . M 6 HOH H 43 595 93 HOH HOH . M 6 HOH H 44 596 95 HOH HOH . M 6 HOH H 45 597 96 HOH HOH . M 6 HOH H 46 598 97 HOH HOH . M 6 HOH H 47 599 99 HOH HOH . M 6 HOH H 48 600 102 HOH HOH . M 6 HOH H 49 601 106 HOH HOH . M 6 HOH H 50 602 108 HOH HOH . M 6 HOH H 51 603 113 HOH HOH . M 6 HOH H 52 604 114 HOH HOH . M 6 HOH H 53 605 117 HOH HOH . M 6 HOH H 54 606 118 HOH HOH . M 6 HOH H 55 607 121 HOH HOH . M 6 HOH H 56 608 122 HOH HOH . M 6 HOH H 57 609 124 HOH HOH . M 6 HOH H 58 610 131 HOH HOH . M 6 HOH H 59 611 133 HOH HOH . M 6 HOH H 60 612 134 HOH HOH . M 6 HOH H 61 613 139 HOH HOH . M 6 HOH H 62 614 143 HOH HOH . M 6 HOH H 63 615 147 HOH HOH . M 6 HOH H 64 616 151 HOH HOH . M 6 HOH H 65 617 152 HOH HOH . M 6 HOH H 66 618 154 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x -48.203 _atom_site.Cartn_y 32.257 _atom_site.Cartn_z 70.085 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.96 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 220 _atom_site.auth_asym_id L _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #