data_1YEJ
#
_model_server_result.job_id            6CS83BBvatWW1-ruqvrRzA 
_model_server_result.datetime_utc      '2025-02-26 19:34:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1yej 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":602}' 
#
_entry.id    1YEJ 
#
_exptl.entry_id    1YEJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1YEJ 
_cell.length_a            78.271 
_cell.length_b            78.271 
_cell.length_c            158.674 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1YEJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 93 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf2 A SG CYS 139 L CYS 134 1_555 A SG CYS 199 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf4 B SG CYS 150 H CYS 140 1_555 B SG CYS 205 H CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc1 A NE2 HIS 54 L HIS 49 1_555 D ZN ZN . L ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? 
metalc ? metalc2 A OD1 ASP 65 L ASP 60 4_456 I ZN ZN . L ZN 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.727 ? 
metalc ? metalc3 A OD2 ASP 65 L ASP 60 4_456 I ZN ZN . L ZN 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? 
metalc ? metalc4 A ND1 HIS 98 L HIS 93 1_555 E ZN ZN . L ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? 
metalc ? metalc5 A OD2 ASP 156 L ASP 151 1_555 F ZN ZN . L ZN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.924 ? 
metalc ? metalc6 A ND1 HIS 194 L HIS 189 1_555 F ZN ZN . L ZN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? 
metalc ? metalc7 J O7 PNF . L PNF 551 1_555 E ZN ZN . L ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? 
metalc ? metalc8 C ZN ZN . L ZN 601 1_555 K O HOH . L HOH 657 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.651 ? 
metalc ? metalc9 C ZN ZN . L ZN 601 1_555 K O HOH . L HOH 680 4_556 ? ? ? ? ? ? ? ? ? ? ? ? 1.843 ? 
metalc ? metalc10 C ZN ZN . L ZN 601 1_555 K O HOH . L HOH 698 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? 
metalc ? metalc11 G ZN ZN . L ZN 602 1_555 K O HOH . L HOH 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.763 ? 
metalc ? metalc12 G ZN ZN . L ZN 602 1_555 K O HOH . L HOH 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.689 ? 
metalc ? metalc13 D ZN ZN . L ZN 603 1_555 K O HOH . L HOH 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.924 ? 
metalc ? metalc14 D ZN ZN . L ZN 603 1_555 B OD1 ASP 107 H ASP 100 1_555 ? ? ? C ? ? ? ? ? ? ? ? 2.117 ? 
metalc ? metalc15 E ZN ZN . L ZN 604 1_555 B OD1 ASP 183 H ASP 181 5_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
metalc ? metalc16 F ZN ZN . L ZN 605 1_555 K O HOH . L HOH 642 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.744 ? 
metalc ? metalc17 F ZN ZN . L ZN 605 1_555 K O HOH . L HOH 657 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc18 H ZN ZN . L ZN 606 1_555 K O HOH . L HOH 642 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.724 ? 
metalc ? metalc19 H ZN ZN . L ZN 606 1_555 K O HOH . L HOH 658 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.712 ? 
metalc ? metalc20 H ZN ZN . L ZN 606 1_555 K O HOH . L HOH 697 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.558 ? 
metalc ? metalc21 I ZN ZN . L ZN 607 1_555 K O HOH . L HOH 658 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.93 ? 
metalc ? metalc22 I ZN ZN . L ZN 607 1_555 K O HOH . L HOH 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? 
metalc ? metalc23 I ZN ZN . L ZN 607 1_555 K O HOH . L HOH 698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.585 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1YEJ 
_atom_sites.fract_transf_matrix[1][1]    0.012776 
_atom_sites.fract_transf_matrix[1][2]    0.007376 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014752 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006302 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ZN L 1 601 1 ZN ZN . 
D 3 ZN L 1 603 3 ZN ZN . 
E 3 ZN L 1 604 4 ZN ZN . 
F 3 ZN L 1 605 5 ZN ZN . 
G 3 ZN L 1 602 2 ZN ZN . 
H 3 ZN L 1 606 6 ZN ZN . 
I 3 ZN L 1 607 7 ZN ZN . 
J 4 PNF L 1 551 551 PNF PNP . 
K 5 HOH L 1 608 1 HOH HOH . 
K 5 HOH L 2 609 2 HOH HOH . 
K 5 HOH L 3 610 6 HOH HOH . 
K 5 HOH L 4 611 7 HOH HOH . 
K 5 HOH L 5 612 10 HOH HOH . 
K 5 HOH L 6 613 16 HOH HOH . 
K 5 HOH L 7 614 17 HOH HOH . 
K 5 HOH L 8 615 18 HOH HOH . 
K 5 HOH L 9 616 19 HOH HOH . 
K 5 HOH L 10 617 20 HOH HOH . 
K 5 HOH L 11 618 21 HOH HOH . 
K 5 HOH L 12 619 22 HOH HOH . 
K 5 HOH L 13 620 23 HOH HOH . 
K 5 HOH L 14 621 24 HOH HOH . 
K 5 HOH L 15 622 26 HOH HOH . 
K 5 HOH L 16 623 28 HOH HOH . 
K 5 HOH L 17 624 30 HOH HOH . 
K 5 HOH L 18 625 31 HOH HOH . 
K 5 HOH L 19 626 34 HOH HOH . 
K 5 HOH L 20 627 36 HOH HOH . 
K 5 HOH L 21 628 41 HOH HOH . 
K 5 HOH L 22 629 43 HOH HOH . 
K 5 HOH L 23 630 44 HOH HOH . 
K 5 HOH L 24 631 45 HOH HOH . 
K 5 HOH L 25 632 46 HOH HOH . 
K 5 HOH L 26 633 47 HOH HOH . 
K 5 HOH L 27 634 48 HOH HOH . 
K 5 HOH L 28 635 50 HOH HOH . 
K 5 HOH L 29 636 52 HOH HOH . 
K 5 HOH L 30 637 53 HOH HOH . 
K 5 HOH L 31 638 54 HOH HOH . 
K 5 HOH L 32 639 55 HOH HOH . 
K 5 HOH L 33 640 57 HOH HOH . 
K 5 HOH L 34 641 60 HOH HOH . 
K 5 HOH L 35 642 61 HOH HOH . 
K 5 HOH L 36 643 62 HOH HOH . 
K 5 HOH L 37 644 64 HOH HOH . 
K 5 HOH L 38 645 66 HOH HOH . 
K 5 HOH L 39 646 67 HOH HOH . 
K 5 HOH L 40 647 68 HOH HOH . 
K 5 HOH L 41 648 69 HOH HOH . 
K 5 HOH L 42 649 70 HOH HOH . 
K 5 HOH L 43 650 71 HOH HOH . 
K 5 HOH L 44 651 77 HOH HOH . 
K 5 HOH L 45 652 79 HOH HOH . 
K 5 HOH L 46 653 80 HOH HOH . 
K 5 HOH L 47 654 81 HOH HOH . 
K 5 HOH L 48 655 83 HOH HOH . 
K 5 HOH L 49 656 85 HOH HOH . 
K 5 HOH L 50 657 87 HOH HOH . 
K 5 HOH L 51 658 89 HOH HOH . 
K 5 HOH L 52 659 90 HOH HOH . 
K 5 HOH L 53 660 91 HOH HOH . 
K 5 HOH L 54 661 92 HOH HOH . 
K 5 HOH L 55 662 98 HOH HOH . 
K 5 HOH L 56 663 100 HOH HOH . 
K 5 HOH L 57 664 102 HOH HOH . 
K 5 HOH L 58 665 105 HOH HOH . 
K 5 HOH L 59 666 106 HOH HOH . 
K 5 HOH L 60 667 107 HOH HOH . 
K 5 HOH L 61 668 110 HOH HOH . 
K 5 HOH L 62 669 111 HOH HOH . 
K 5 HOH L 63 670 112 HOH HOH . 
K 5 HOH L 64 671 113 HOH HOH . 
K 5 HOH L 65 672 116 HOH HOH . 
K 5 HOH L 66 673 117 HOH HOH . 
K 5 HOH L 67 674 120 HOH HOH . 
K 5 HOH L 68 675 122 HOH HOH . 
K 5 HOH L 69 676 123 HOH HOH . 
K 5 HOH L 70 677 126 HOH HOH . 
K 5 HOH L 71 678 128 HOH HOH . 
K 5 HOH L 72 679 132 HOH HOH . 
K 5 HOH L 73 680 133 HOH HOH . 
K 5 HOH L 74 681 134 HOH HOH . 
K 5 HOH L 75 682 137 HOH HOH . 
K 5 HOH L 76 683 138 HOH HOH . 
K 5 HOH L 77 684 140 HOH HOH . 
K 5 HOH L 78 685 142 HOH HOH . 
K 5 HOH L 79 686 149 HOH HOH . 
K 5 HOH L 80 687 152 HOH HOH . 
K 5 HOH L 81 688 154 HOH HOH . 
K 5 HOH L 82 689 155 HOH HOH . 
K 5 HOH L 83 690 156 HOH HOH . 
K 5 HOH L 84 691 158 HOH HOH . 
K 5 HOH L 85 692 159 HOH HOH . 
K 5 HOH L 86 693 161 HOH HOH . 
K 5 HOH L 87 694 162 HOH HOH . 
K 5 HOH L 88 695 163 HOH HOH . 
K 5 HOH L 89 696 2 HOH ZN . 
K 5 HOH L 90 697 6 HOH ZN . 
K 5 HOH L 91 698 7 HOH ZN . 
L 5 HOH H 1 224 3 HOH HOH . 
L 5 HOH H 2 225 4 HOH HOH . 
L 5 HOH H 3 226 5 HOH HOH . 
L 5 HOH H 4 227 8 HOH HOH . 
L 5 HOH H 5 228 9 HOH HOH . 
L 5 HOH H 6 229 11 HOH HOH . 
L 5 HOH H 7 230 12 HOH HOH . 
L 5 HOH H 8 231 13 HOH HOH . 
L 5 HOH H 9 232 14 HOH HOH . 
L 5 HOH H 10 233 15 HOH HOH . 
L 5 HOH H 11 234 25 HOH HOH . 
L 5 HOH H 12 235 27 HOH HOH . 
L 5 HOH H 13 236 29 HOH HOH . 
L 5 HOH H 14 237 32 HOH HOH . 
L 5 HOH H 15 238 33 HOH HOH . 
L 5 HOH H 16 239 35 HOH HOH . 
L 5 HOH H 17 240 37 HOH HOH . 
L 5 HOH H 18 241 38 HOH HOH . 
L 5 HOH H 19 242 39 HOH HOH . 
L 5 HOH H 20 243 40 HOH HOH . 
L 5 HOH H 21 244 42 HOH HOH . 
L 5 HOH H 22 245 49 HOH HOH . 
L 5 HOH H 23 246 51 HOH HOH . 
L 5 HOH H 24 247 56 HOH HOH . 
L 5 HOH H 25 248 58 HOH HOH . 
L 5 HOH H 26 249 59 HOH HOH . 
L 5 HOH H 27 250 63 HOH HOH . 
L 5 HOH H 28 251 65 HOH HOH . 
L 5 HOH H 29 252 72 HOH HOH . 
L 5 HOH H 30 253 73 HOH HOH . 
L 5 HOH H 31 254 74 HOH HOH . 
L 5 HOH H 32 255 75 HOH HOH . 
L 5 HOH H 33 256 76 HOH HOH . 
L 5 HOH H 34 257 78 HOH HOH . 
L 5 HOH H 35 258 82 HOH HOH . 
L 5 HOH H 36 259 84 HOH HOH . 
L 5 HOH H 37 260 86 HOH HOH . 
L 5 HOH H 38 261 93 HOH HOH . 
L 5 HOH H 39 262 94 HOH HOH . 
L 5 HOH H 40 263 95 HOH HOH . 
L 5 HOH H 41 264 96 HOH HOH . 
L 5 HOH H 42 265 97 HOH HOH . 
L 5 HOH H 43 266 99 HOH HOH . 
L 5 HOH H 44 267 101 HOH HOH . 
L 5 HOH H 45 268 103 HOH HOH . 
L 5 HOH H 46 269 104 HOH HOH . 
L 5 HOH H 47 270 108 HOH HOH . 
L 5 HOH H 48 271 114 HOH HOH . 
L 5 HOH H 49 272 118 HOH HOH . 
L 5 HOH H 50 273 119 HOH HOH . 
L 5 HOH H 51 274 121 HOH HOH . 
L 5 HOH H 52 275 124 HOH HOH . 
L 5 HOH H 53 276 125 HOH HOH . 
L 5 HOH H 54 277 127 HOH HOH . 
L 5 HOH H 55 278 129 HOH HOH . 
L 5 HOH H 56 279 130 HOH HOH . 
L 5 HOH H 57 280 135 HOH HOH . 
L 5 HOH H 58 281 136 HOH HOH . 
L 5 HOH H 59 282 139 HOH HOH . 
L 5 HOH H 60 283 141 HOH HOH . 
L 5 HOH H 61 284 143 HOH HOH . 
L 5 HOH H 62 285 144 HOH HOH . 
L 5 HOH H 63 286 146 HOH HOH . 
L 5 HOH H 64 287 147 HOH HOH . 
L 5 HOH H 65 288 148 HOH HOH . 
L 5 HOH H 66 289 150 HOH HOH . 
L 5 HOH H 67 290 153 HOH HOH . 
L 5 HOH H 68 291 157 HOH HOH . 
L 5 HOH H 69 292 160 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         G 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               19.034 
_atom_site.Cartn_y               25.838 
_atom_site.Cartn_z               54.149 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        44.86 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           602 
_atom_site.auth_asym_id          L 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           1 
#