data_1YGK # _model_server_result.job_id ht4Zpt0VXCevpgJAmfscRA _model_server_result.datetime_utc '2024-11-29 21:42:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ygk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 1YGK # _exptl.entry_id 1YGK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 354.449 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description R-ROSCOVITINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1YGK _cell.length_a 102.832 _cell.length_b 102.832 _cell.length_c 58.552 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YGK _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H26 N6 O' _chem_comp.formula_weight 354.449 _chem_comp.id RRC _chem_comp.mon_nstd_flag . _chem_comp.name R-ROSCOVITINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAP CAQ RRC sing 277 n n OAP HAP RRC sing 278 n n CAQ CAR RRC sing 279 n n CAQ HAQ1 RRC sing 280 n n CAQ HAQ2 RRC sing 281 n n CAR CAK RRC sing 282 n n CAR NAS RRC sing 283 n n CAR HAR RRC sing 284 n n CAK CAI RRC sing 285 n n CAK HAK1 RRC sing 286 n n CAK HAK2 RRC sing 287 n n CAI HAI1 RRC sing 288 n n CAI HAI2 RRC sing 289 n n CAI HAI3 RRC sing 290 n n NAS CAT RRC sing 291 n n NAS HAS RRC sing 292 n n CAT NAU RRC doub 293 n y CAT NAL RRC sing 294 n y NAU CAV RRC sing 295 n y CAV NAW RRC sing 296 n y CAV CAN RRC doub 297 n y NAW CAZ RRC sing 298 n n NAW CAX RRC sing 299 n y CAZ CAY RRC sing 300 n n CAZ CBA RRC sing 301 n n CAZ HAZ RRC sing 302 n n CAY HAY1 RRC sing 303 n n CAY HAY2 RRC sing 304 n n CAY HAY3 RRC sing 305 n n CBA HBA1 RRC sing 306 n n CBA HBA2 RRC sing 307 n n CBA HBA3 RRC sing 308 n n CAX NAO RRC doub 309 n y CAX HAX RRC sing 310 n n CAN NAO RRC sing 311 n y CAN CAM RRC sing 312 n y NAL CAM RRC doub 313 n y CAM NAJ RRC sing 314 n n NAJ CAD RRC sing 315 n n NAJ HAJ RRC sing 316 n n CAD CAE RRC sing 317 n n CAD HAD1 RRC sing 318 n n CAD HAD2 RRC sing 319 n n CAE CAG RRC doub 320 n y CAE CAB RRC sing 321 n y CAG CAH RRC sing 322 n y CAG HAG RRC sing 323 n n CAH CAF RRC doub 324 n y CAH HAH RRC sing 325 n n CAF CAC RRC sing 326 n y CAF HAF RRC sing 327 n n CAC CAB RRC doub 328 n y CAC HAC RRC sing 329 n n CAB HAB RRC sing 330 n n # _atom_sites.entry_id 1YGK _atom_sites.fract_transf_matrix[1][1] 0.009725 _atom_sites.fract_transf_matrix[1][2] 0.005615 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011229 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017079 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RRC A 1 1001 1 RRC RRC . C 3 HOH A 1 1002 1 HOH TIP . C 3 HOH A 2 1003 2 HOH TIP . C 3 HOH A 3 1004 3 HOH TIP . C 3 HOH A 4 1005 4 HOH TIP . C 3 HOH A 5 1006 5 HOH TIP . C 3 HOH A 6 1007 6 HOH TIP . C 3 HOH A 7 1008 7 HOH TIP . C 3 HOH A 8 1009 8 HOH TIP . C 3 HOH A 9 1010 9 HOH TIP . C 3 HOH A 10 1011 10 HOH TIP . C 3 HOH A 11 1012 11 HOH TIP . C 3 HOH A 12 1013 12 HOH TIP . C 3 HOH A 13 1014 13 HOH TIP . C 3 HOH A 14 1015 14 HOH TIP . C 3 HOH A 15 1016 15 HOH TIP . C 3 HOH A 16 1017 16 HOH TIP . C 3 HOH A 17 1018 17 HOH TIP . C 3 HOH A 18 1019 18 HOH TIP . C 3 HOH A 19 1020 19 HOH TIP . C 3 HOH A 20 1021 20 HOH TIP . C 3 HOH A 21 1022 21 HOH TIP . C 3 HOH A 22 1023 22 HOH TIP . C 3 HOH A 23 1024 23 HOH TIP . C 3 HOH A 24 1025 24 HOH TIP . C 3 HOH A 25 1026 25 HOH TIP . C 3 HOH A 26 1027 26 HOH TIP . C 3 HOH A 27 1028 27 HOH TIP . C 3 HOH A 28 1029 28 HOH TIP . C 3 HOH A 29 1030 29 HOH TIP . C 3 HOH A 30 1031 30 HOH TIP . C 3 HOH A 31 1032 31 HOH TIP . C 3 HOH A 32 1033 32 HOH TIP . C 3 HOH A 33 1034 33 HOH TIP . C 3 HOH A 34 1035 34 HOH TIP . C 3 HOH A 35 1036 35 HOH TIP . C 3 HOH A 36 1037 36 HOH TIP . C 3 HOH A 37 1038 37 HOH TIP . C 3 HOH A 38 1039 38 HOH TIP . C 3 HOH A 39 1040 39 HOH TIP . C 3 HOH A 40 1041 40 HOH TIP . C 3 HOH A 41 1042 41 HOH TIP . C 3 HOH A 42 1043 42 HOH TIP . C 3 HOH A 43 1044 43 HOH TIP . C 3 HOH A 44 1045 44 HOH TIP . C 3 HOH A 45 1046 45 HOH TIP . C 3 HOH A 46 1047 46 HOH TIP . C 3 HOH A 47 1048 47 HOH TIP . C 3 HOH A 48 1049 48 HOH TIP . C 3 HOH A 49 1050 49 HOH TIP . C 3 HOH A 50 1051 50 HOH TIP . C 3 HOH A 51 1052 51 HOH TIP . C 3 HOH A 52 1053 52 HOH TIP . C 3 HOH A 53 1054 53 HOH TIP . C 3 HOH A 54 1055 54 HOH TIP . C 3 HOH A 55 1056 55 HOH TIP . C 3 HOH A 56 1057 56 HOH TIP . C 3 HOH A 57 1058 57 HOH TIP . C 3 HOH A 58 1059 58 HOH TIP . C 3 HOH A 59 1060 59 HOH TIP . C 3 HOH A 60 1061 60 HOH TIP . C 3 HOH A 61 1062 61 HOH TIP . C 3 HOH A 62 1063 62 HOH TIP . C 3 HOH A 63 1064 63 HOH TIP . C 3 HOH A 64 1065 64 HOH TIP . C 3 HOH A 65 1066 65 HOH TIP . C 3 HOH A 66 1067 66 HOH TIP . C 3 HOH A 67 1068 67 HOH TIP . C 3 HOH A 68 1069 68 HOH TIP . C 3 HOH A 69 1070 69 HOH TIP . C 3 HOH A 70 1071 70 HOH TIP . C 3 HOH A 71 1072 71 HOH TIP . C 3 HOH A 72 1073 72 HOH TIP . C 3 HOH A 73 1074 73 HOH TIP . C 3 HOH A 74 1075 74 HOH TIP . C 3 HOH A 75 1076 75 HOH TIP . C 3 HOH A 76 1077 76 HOH TIP . C 3 HOH A 77 1078 77 HOH TIP . C 3 HOH A 78 1079 78 HOH TIP . C 3 HOH A 79 1080 79 HOH TIP . C 3 HOH A 80 1081 80 HOH TIP . C 3 HOH A 81 1082 81 HOH TIP . C 3 HOH A 82 1083 82 HOH TIP . C 3 HOH A 83 1084 83 HOH TIP . C 3 HOH A 84 1085 84 HOH TIP . C 3 HOH A 85 1086 85 HOH TIP . C 3 HOH A 86 1087 86 HOH TIP . C 3 HOH A 87 1088 87 HOH TIP . C 3 HOH A 88 1089 88 HOH TIP . C 3 HOH A 89 1090 89 HOH TIP . C 3 HOH A 90 1091 90 HOH TIP . C 3 HOH A 91 1092 91 HOH TIP . C 3 HOH A 92 1093 92 HOH TIP . C 3 HOH A 93 1094 93 HOH TIP . C 3 HOH A 94 1095 94 HOH TIP . C 3 HOH A 95 1096 95 HOH TIP . C 3 HOH A 96 1097 96 HOH TIP . C 3 HOH A 97 1098 97 HOH TIP . C 3 HOH A 98 1099 98 HOH TIP . C 3 HOH A 99 1100 99 HOH TIP . C 3 HOH A 100 1101 100 HOH TIP . C 3 HOH A 101 1102 101 HOH TIP . C 3 HOH A 102 1103 102 HOH TIP . C 3 HOH A 103 1104 103 HOH TIP . C 3 HOH A 104 1105 104 HOH TIP . C 3 HOH A 105 1106 105 HOH TIP . C 3 HOH A 106 1107 106 HOH TIP . C 3 HOH A 107 1108 107 HOH TIP . C 3 HOH A 108 1109 108 HOH TIP . C 3 HOH A 109 1110 109 HOH TIP . C 3 HOH A 110 1111 110 HOH TIP . C 3 HOH A 111 1112 111 HOH TIP . C 3 HOH A 112 1113 112 HOH TIP . C 3 HOH A 113 1114 113 HOH TIP . C 3 HOH A 114 1115 114 HOH TIP . C 3 HOH A 115 1116 115 HOH TIP . C 3 HOH A 116 1117 116 HOH TIP . C 3 HOH A 117 1118 117 HOH TIP . C 3 HOH A 118 1119 118 HOH TIP . C 3 HOH A 119 1120 119 HOH TIP . C 3 HOH A 120 1121 120 HOH TIP . C 3 HOH A 121 1122 121 HOH TIP . C 3 HOH A 122 1123 122 HOH TIP . C 3 HOH A 123 1124 123 HOH TIP . C 3 HOH A 124 1125 124 HOH TIP . C 3 HOH A 125 1126 125 HOH TIP . C 3 HOH A 126 1127 126 HOH TIP . C 3 HOH A 127 1128 127 HOH TIP . C 3 HOH A 128 1129 128 HOH TIP . C 3 HOH A 129 1130 129 HOH TIP . C 3 HOH A 130 1131 130 HOH TIP . C 3 HOH A 131 1132 131 HOH TIP . C 3 HOH A 132 1133 132 HOH TIP . C 3 HOH A 133 1134 133 HOH TIP . C 3 HOH A 134 1135 134 HOH TIP . C 3 HOH A 135 1136 135 HOH TIP . C 3 HOH A 136 1137 136 HOH TIP . C 3 HOH A 137 1138 137 HOH TIP . C 3 HOH A 138 1139 138 HOH TIP . C 3 HOH A 139 1140 139 HOH TIP . C 3 HOH A 140 1141 140 HOH TIP . C 3 HOH A 141 1142 141 HOH TIP . C 3 HOH A 142 1143 142 HOH TIP . C 3 HOH A 143 1144 143 HOH TIP . C 3 HOH A 144 1145 144 HOH TIP . C 3 HOH A 145 1146 145 HOH TIP . C 3 HOH A 146 1147 146 HOH TIP . C 3 HOH A 147 1148 147 HOH TIP . C 3 HOH A 148 1149 148 HOH TIP . C 3 HOH A 149 1150 149 HOH TIP . C 3 HOH A 150 1151 150 HOH TIP . C 3 HOH A 151 1152 151 HOH TIP . C 3 HOH A 152 1153 152 HOH TIP . C 3 HOH A 153 1154 153 HOH TIP . C 3 HOH A 154 1155 154 HOH TIP . C 3 HOH A 155 1156 155 HOH TIP . C 3 HOH A 156 1157 156 HOH TIP . C 3 HOH A 157 1158 157 HOH TIP . C 3 HOH A 158 1159 158 HOH TIP . C 3 HOH A 159 1160 159 HOH TIP . C 3 HOH A 160 1161 160 HOH TIP . C 3 HOH A 161 1162 161 HOH TIP . C 3 HOH A 162 1163 162 HOH TIP . C 3 HOH A 163 1164 163 HOH TIP . C 3 HOH A 164 1165 164 HOH TIP . C 3 HOH A 165 1166 165 HOH TIP . C 3 HOH A 166 1167 166 HOH TIP . C 3 HOH A 167 1168 167 HOH TIP . C 3 HOH A 168 1169 168 HOH TIP . C 3 HOH A 169 1170 169 HOH TIP . C 3 HOH A 170 1171 170 HOH TIP . C 3 HOH A 171 1172 171 HOH TIP . C 3 HOH A 172 1173 172 HOH TIP . C 3 HOH A 173 1174 173 HOH TIP . C 3 HOH A 174 1175 174 HOH TIP . C 3 HOH A 175 1176 175 HOH TIP . C 3 HOH A 176 1177 176 HOH TIP . C 3 HOH A 177 1178 177 HOH TIP . C 3 HOH A 178 1179 178 HOH TIP . C 3 HOH A 179 1180 179 HOH TIP . C 3 HOH A 180 1181 180 HOH TIP . C 3 HOH A 181 1182 181 HOH TIP . C 3 HOH A 182 1183 182 HOH TIP . C 3 HOH A 183 1184 183 HOH TIP . C 3 HOH A 184 1185 184 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAP RRC . . . B 2 -4.076 46.746 8.922 1 47.72 ? OAP RRC 1001 A 1 HETATM 2 C CAQ RRC . . . B 2 -5.106 47.494 9.508 1 43.47 ? CAQ RRC 1001 A 1 HETATM 3 C CAR RRC . . . B 2 -5.753 46.587 10.552 1 41.71 ? CAR RRC 1001 A 1 HETATM 4 C CAK RRC . . . B 2 -5.676 47.338 11.911 1 40.6 ? CAK RRC 1001 A 1 HETATM 5 C CAI RRC . . . B 2 -6.802 48.299 12.257 1 40.58 ? CAI RRC 1001 A 1 HETATM 6 N NAS RRC . . . B 2 -7.1 46.36 9.985 1 41.09 ? NAS RRC 1001 A 1 HETATM 7 C CAT RRC . . . B 2 -8.127 45.595 10.484 1 37.85 ? CAT RRC 1001 A 1 HETATM 8 N NAU RRC . . . B 2 -7.864 44.758 11.539 1 37.02 ? NAU RRC 1001 A 1 HETATM 9 C CAV RRC . . . B 2 -8.852 43.978 12.07 1 37.3 ? CAV RRC 1001 A 1 HETATM 10 N NAW RRC . . . B 2 -8.732 43.132 13.077 1 37.04 ? NAW RRC 1001 A 1 HETATM 11 C CAZ RRC . . . B 2 -7.361 43.046 13.674 1 37.47 ? CAZ RRC 1001 A 1 HETATM 12 C CAY RRC . . . B 2 -7.35 43.525 15.122 1 37.06 ? CAY RRC 1001 A 1 HETATM 13 C CBA RRC . . . B 2 -6.853 41.631 13.621 1 38.2 ? CBA RRC 1001 A 1 HETATM 14 C CAX RRC . . . B 2 -9.973 42.564 13.276 1 34.48 ? CAX RRC 1001 A 1 HETATM 15 C CAN RRC . . . B 2 -10.144 43.971 11.605 1 35.24 ? CAN RRC 1001 A 1 HETATM 16 N NAO RRC . . . B 2 -10.904 43.067 12.358 1 35.96 ? NAO RRC 1001 A 1 HETATM 17 N NAL RRC . . . B 2 -9.409 45.611 9.989 1 36.91 ? NAL RRC 1001 A 1 HETATM 18 C CAM RRC . . . B 2 -10.418 44.834 10.505 1 35.63 ? CAM RRC 1001 A 1 HETATM 19 N NAJ RRC . . . B 2 -11.67 44.879 9.977 1 35.32 ? NAJ RRC 1001 A 1 HETATM 20 C CAD RRC . . . B 2 -12.913 45 10.748 1 36.47 ? CAD RRC 1001 A 1 HETATM 21 C CAE RRC . . . B 2 -13.263 46.392 11.246 1 37.2 ? CAE RRC 1001 A 1 HETATM 22 C CAG RRC . . . B 2 -13.466 46.604 12.642 1 36.12 ? CAG RRC 1001 A 1 HETATM 23 C CAH RRC . . . B 2 -13.799 47.896 13.133 1 36.49 ? CAH RRC 1001 A 1 HETATM 24 C CAF RRC . . . B 2 -13.934 48.984 12.228 1 38.5 ? CAF RRC 1001 A 1 HETATM 25 C CAC RRC . . . B 2 -13.731 48.781 10.833 1 38.9 ? CAC RRC 1001 A 1 HETATM 26 C CAB RRC . . . B 2 -13.397 47.481 10.34 1 37.47 ? CAB RRC 1001 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 26 #