data_1YIV # _model_server_result.job_id 57_rLSrgXZNj537hFgwLKA _model_server_result.datetime_utc '2024-11-24 08:21:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1yiv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2001}' # _entry.id 1YIV # _exptl.entry_id 1YIV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 229.402 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LAURYL DIMETHYLAMINE-N-OXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1YIV _cell.length_a 45.846 _cell.length_b 45.846 _cell.length_c 125.778 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YIV _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H31 N O' _chem_comp.formula_weight 229.402 _chem_comp.id LDA _chem_comp.mon_nstd_flag . _chem_comp.name 'LAURYL DIMETHYLAMINE-N-OXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 O1 LDA sing 185 n n N1 CM1 LDA sing 186 n n N1 CM2 LDA sing 187 n n N1 C1 LDA sing 188 n n CM1 HM11 LDA sing 189 n n CM1 HM12 LDA sing 190 n n CM1 HM13 LDA sing 191 n n CM2 HM21 LDA sing 192 n n CM2 HM22 LDA sing 193 n n CM2 HM23 LDA sing 194 n n C1 C2 LDA sing 195 n n C1 H11 LDA sing 196 n n C1 H12 LDA sing 197 n n C2 C3 LDA sing 198 n n C2 H21 LDA sing 199 n n C2 H22 LDA sing 200 n n C3 C4 LDA sing 201 n n C3 H31 LDA sing 202 n n C3 H32 LDA sing 203 n n C4 C5 LDA sing 204 n n C4 H41 LDA sing 205 n n C4 H42 LDA sing 206 n n C5 C6 LDA sing 207 n n C5 H51 LDA sing 208 n n C5 H52 LDA sing 209 n n C6 C7 LDA sing 210 n n C6 H61 LDA sing 211 n n C6 H62 LDA sing 212 n n C7 C8 LDA sing 213 n n C7 H71 LDA sing 214 n n C7 H72 LDA sing 215 n n C8 C9 LDA sing 216 n n C8 H81 LDA sing 217 n n C8 H82 LDA sing 218 n n C9 C10 LDA sing 219 n n C9 H91 LDA sing 220 n n C9 H92 LDA sing 221 n n C10 C11 LDA sing 222 n n C10 H101 LDA sing 223 n n C10 H102 LDA sing 224 n n C11 C12 LDA sing 225 n n C11 H111 LDA sing 226 n n C11 H112 LDA sing 227 n n C12 H121 LDA sing 228 n n C12 H122 LDA sing 229 n n C12 H123 LDA sing 230 n n # _atom_sites.entry_id 1YIV _atom_sites.fract_transf_matrix[1][1] 0.021812 _atom_sites.fract_transf_matrix[1][2] 0.012593 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025187 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007951 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EPE A 1 1001 1 EPE EPE . C 3 LDA A 1 2001 1 LDA LDA . D 4 HOH A 1 2002 1 HOH HOH . D 4 HOH A 2 2003 2 HOH HOH . D 4 HOH A 3 2004 3 HOH HOH . D 4 HOH A 4 2005 4 HOH HOH . D 4 HOH A 5 2006 5 HOH HOH . D 4 HOH A 6 2007 6 HOH HOH . D 4 HOH A 7 2008 7 HOH HOH . D 4 HOH A 8 2009 8 HOH HOH . D 4 HOH A 9 2010 9 HOH HOH . D 4 HOH A 10 2011 10 HOH HOH . D 4 HOH A 11 2012 11 HOH HOH . D 4 HOH A 12 2013 12 HOH HOH . D 4 HOH A 13 2014 13 HOH HOH . D 4 HOH A 14 2015 14 HOH HOH . D 4 HOH A 15 2016 16 HOH HOH . D 4 HOH A 16 2017 17 HOH HOH . D 4 HOH A 17 2018 18 HOH HOH . D 4 HOH A 18 2019 20 HOH HOH . D 4 HOH A 19 2020 21 HOH HOH . D 4 HOH A 20 2021 22 HOH HOH . D 4 HOH A 21 2022 23 HOH HOH . D 4 HOH A 22 2023 24 HOH HOH . D 4 HOH A 23 2024 25 HOH HOH . D 4 HOH A 24 2025 26 HOH HOH . D 4 HOH A 25 2026 27 HOH HOH . D 4 HOH A 26 2027 28 HOH HOH . D 4 HOH A 27 2028 29 HOH HOH . D 4 HOH A 28 2029 30 HOH HOH . D 4 HOH A 29 2030 31 HOH HOH . D 4 HOH A 30 2031 32 HOH HOH . D 4 HOH A 31 2032 33 HOH HOH . D 4 HOH A 32 2033 34 HOH HOH . D 4 HOH A 33 2034 35 HOH HOH . D 4 HOH A 34 2035 36 HOH HOH . D 4 HOH A 35 2036 37 HOH HOH . D 4 HOH A 36 2037 38 HOH HOH . D 4 HOH A 37 2038 39 HOH HOH . D 4 HOH A 38 2039 40 HOH HOH . D 4 HOH A 39 2040 41 HOH HOH . D 4 HOH A 40 2041 43 HOH HOH . D 4 HOH A 41 2042 44 HOH HOH . D 4 HOH A 42 2043 45 HOH HOH . D 4 HOH A 43 2044 46 HOH HOH . D 4 HOH A 44 2045 47 HOH HOH . D 4 HOH A 45 2046 48 HOH HOH . D 4 HOH A 46 2047 49 HOH HOH . D 4 HOH A 47 2048 51 HOH HOH . D 4 HOH A 48 2049 52 HOH HOH . D 4 HOH A 49 2050 53 HOH HOH . D 4 HOH A 50 2051 55 HOH HOH . D 4 HOH A 51 2052 56 HOH HOH . D 4 HOH A 52 2053 57 HOH HOH . D 4 HOH A 53 2054 58 HOH HOH . D 4 HOH A 54 2055 59 HOH HOH . D 4 HOH A 55 2056 61 HOH HOH . D 4 HOH A 56 2057 63 HOH HOH . D 4 HOH A 57 2058 64 HOH HOH . D 4 HOH A 58 2059 65 HOH HOH . D 4 HOH A 59 2060 66 HOH HOH . D 4 HOH A 60 2061 68 HOH HOH . D 4 HOH A 61 2062 69 HOH HOH . D 4 HOH A 62 2063 70 HOH HOH . D 4 HOH A 63 2064 71 HOH HOH . D 4 HOH A 64 2065 72 HOH HOH . D 4 HOH A 65 2066 73 HOH HOH . D 4 HOH A 66 2067 74 HOH HOH . D 4 HOH A 67 2068 75 HOH HOH . D 4 HOH A 68 2069 76 HOH HOH . D 4 HOH A 69 2070 77 HOH HOH . D 4 HOH A 70 2071 78 HOH HOH . D 4 HOH A 71 2072 79 HOH HOH . D 4 HOH A 72 2073 80 HOH HOH . D 4 HOH A 73 2074 81 HOH HOH . D 4 HOH A 74 2075 82 HOH HOH . D 4 HOH A 75 2076 83 HOH HOH . D 4 HOH A 76 2077 84 HOH HOH . D 4 HOH A 77 2078 85 HOH HOH . D 4 HOH A 78 2079 86 HOH HOH . D 4 HOH A 79 2080 87 HOH HOH . D 4 HOH A 80 2081 89 HOH HOH . D 4 HOH A 81 2082 90 HOH HOH . D 4 HOH A 82 2083 91 HOH HOH . D 4 HOH A 83 2084 93 HOH HOH . D 4 HOH A 84 2085 94 HOH HOH . D 4 HOH A 85 2086 95 HOH HOH . D 4 HOH A 86 2087 97 HOH HOH . D 4 HOH A 87 2088 98 HOH HOH . D 4 HOH A 88 2089 99 HOH HOH . D 4 HOH A 89 2090 100 HOH HOH . D 4 HOH A 90 2091 101 HOH HOH . D 4 HOH A 91 2092 103 HOH HOH . D 4 HOH A 92 2093 104 HOH HOH . D 4 HOH A 93 2094 105 HOH HOH . D 4 HOH A 94 2095 106 HOH HOH . D 4 HOH A 95 2096 107 HOH HOH . D 4 HOH A 96 2097 108 HOH HOH . D 4 HOH A 97 2098 109 HOH HOH . D 4 HOH A 98 2099 110 HOH HOH . D 4 HOH A 99 2100 111 HOH HOH . D 4 HOH A 100 2101 112 HOH HOH . D 4 HOH A 101 2102 113 HOH HOH . D 4 HOH A 102 2103 115 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 LDA . . . C 3 -6.918 21.293 9.904 1 82.08 ? N1 LDA 2001 A 1 HETATM 2 O O1 LDA . . . C 3 -6.767 20.443 10.811 1 83.63 ? O1 LDA 2001 A 1 HETATM 3 C CM1 LDA . . . C 3 -5.582 21.529 9.348 1 82.8 ? CM1 LDA 2001 A 1 HETATM 4 C CM2 LDA . . . C 3 -7.727 20.675 8.833 1 83.52 ? CM2 LDA 2001 A 1 HETATM 5 C C1 LDA . . . C 3 -7.509 22.557 10.392 1 78.27 ? C1 LDA 2001 A 1 HETATM 6 C C2 LDA . . . C 3 -8.68 22.252 11.311 1 74.89 ? C2 LDA 2001 A 1 HETATM 7 C C3 LDA . . . C 3 -9.633 23.433 11.417 1 73.94 ? C3 LDA 2001 A 1 HETATM 8 C C4 LDA . . . C 3 -10.849 23.069 12.271 1 72.66 ? C4 LDA 2001 A 1 HETATM 9 C C5 LDA . . . C 3 -12.043 23.978 12.017 1 70.15 ? C5 LDA 2001 A 1 HETATM 10 C C6 LDA . . . C 3 -13.336 23.324 12.467 1 70.65 ? C6 LDA 2001 A 1 HETATM 11 C C7 LDA . . . C 3 -14.545 24.26 12.49 1 72.22 ? C7 LDA 2001 A 1 HETATM 12 C C8 LDA . . . C 3 -15.497 24.07 11.3 1 74.35 ? C8 LDA 2001 A 1 HETATM 13 C C9 LDA . . . C 3 -16.677 25.048 11.371 1 77.07 ? C9 LDA 2001 A 1 HETATM 14 C C10 LDA . . . C 3 -17.615 25.022 10.151 1 78.6 ? C10 LDA 2001 A 1 HETATM 15 C C11 LDA . . . C 3 -18.779 24.023 10.278 1 78.86 ? C11 LDA 2001 A 1 HETATM 16 C C12 LDA . . . C 3 -19.926 24.333 9.314 1 78.69 ? C12 LDA 2001 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 16 #