data_1YKY
#
_model_server_result.job_id            Pyhhlkkq4suMPg8f61MunA 
_model_server_result.datetime_utc      '2024-11-22 04:40:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1yky 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":209}' 
#
_entry.id    1YKY 
#
_exptl.entry_id    1YKY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              74.122 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-BUTANOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1YKY 
_cell.length_a            79.294 
_cell.length_b            79.294 
_cell.length_c            37.93 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1YKY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 X CYS 6 1_555 A SG CYS 127 X CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf2 A SG CYS 30 X CYS 30 1_555 A SG CYS 115 X CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 A SG CYS 64 X CYS 64 1_555 A SG CYS 80 X CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 A SG CYS 76 X CYS 76 1_555 A SG CYS 94 X CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc1 A O SER 60 X SER 60 1_555 B NA NA . X NA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? 
metalc ? metalc2 A O CYS 64 X CYS 64 1_555 B NA NA . X NA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? 
metalc ? metalc3 A OG SER 72 X SER 72 1_555 B NA NA . X NA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? 
metalc ? metalc4 A O ARG 73 X ARG 73 1_555 B NA NA . X NA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? 
metalc ? metalc5 B NA NA . X NA 130 1_555 F O HOH . X HOH 1046 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.712 ? 
metalc ? metalc6 B NA NA . X NA 130 1_555 F O HOH . X HOH 1075 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? 
#
_chem_comp.formula           'C4 H10 O' 
_chem_comp.formula_weight    74.122 
_chem_comp.id                1BO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-BUTANOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     BUTAN-1-OL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 1BO sing 1 n n 
C1 H11 1BO sing 2 n n 
C1 H12 1BO sing 3 n n 
C1 H13 1BO sing 4 n n 
C2 C3 1BO sing 5 n n 
C2 H21 1BO sing 6 n n 
C2 H22 1BO sing 7 n n 
C3 C4 1BO sing 8 n n 
C3 H31 1BO sing 9 n n 
C3 H32 1BO sing 10 n n 
C4 OH 1BO sing 11 n n 
C4 H41 1BO sing 12 n n 
C4 H42 1BO sing 13 n n 
OH HO 1BO sing 14 n n 
#
_atom_sites.entry_id                     1YKY 
_atom_sites.fract_transf_matrix[1][1]    0.012611 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012611 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026364 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA X 1 130 76 NA NA . 
C 3 CL X 1 1036 36 CL CL . 
D 4 1BO X 1 208 208 1BO 1BO . 
E 4 1BO X 1 209 209 1BO 1BO . 
F 5 HOH X 1 1037 2 HOH WAT . 
F 5 HOH X 2 1038 3 HOH WAT . 
F 5 HOH X 3 1039 4 HOH WAT . 
F 5 HOH X 4 1040 5 HOH WAT . 
F 5 HOH X 5 1041 6 HOH WAT . 
F 5 HOH X 6 1042 8 HOH WAT . 
F 5 HOH X 7 1043 9 HOH WAT . 
F 5 HOH X 8 1044 10 HOH WAT . 
F 5 HOH X 9 1045 11 HOH WAT . 
F 5 HOH X 10 1046 12 HOH WAT . 
F 5 HOH X 11 1047 14 HOH WAT . 
F 5 HOH X 12 1048 15 HOH WAT . 
F 5 HOH X 13 1049 16 HOH WAT . 
F 5 HOH X 14 1050 17 HOH WAT . 
F 5 HOH X 15 1051 18 HOH WAT . 
F 5 HOH X 16 1052 20 HOH WAT . 
F 5 HOH X 17 1053 21 HOH WAT . 
F 5 HOH X 18 1054 23 HOH WAT . 
F 5 HOH X 19 1055 24 HOH WAT . 
F 5 HOH X 20 1056 25 HOH WAT . 
F 5 HOH X 21 1057 26 HOH WAT . 
F 5 HOH X 22 1058 27 HOH WAT . 
F 5 HOH X 23 1059 28 HOH WAT . 
F 5 HOH X 24 1060 29 HOH WAT . 
F 5 HOH X 25 1061 30 HOH WAT . 
F 5 HOH X 26 1062 31 HOH WAT . 
F 5 HOH X 27 1063 32 HOH WAT . 
F 5 HOH X 28 1064 33 HOH WAT . 
F 5 HOH X 29 1065 35 HOH WAT . 
F 5 HOH X 30 1066 36 HOH WAT . 
F 5 HOH X 31 1067 37 HOH WAT . 
F 5 HOH X 32 1068 38 HOH WAT . 
F 5 HOH X 33 1069 39 HOH WAT . 
F 5 HOH X 34 1070 40 HOH WAT . 
F 5 HOH X 35 1071 41 HOH WAT . 
F 5 HOH X 36 1072 42 HOH WAT . 
F 5 HOH X 37 1073 44 HOH WAT . 
F 5 HOH X 38 1074 46 HOH WAT . 
F 5 HOH X 39 1075 47 HOH WAT . 
F 5 HOH X 40 1076 49 HOH WAT . 
F 5 HOH X 41 1077 50 HOH WAT . 
F 5 HOH X 42 1078 51 HOH WAT . 
F 5 HOH X 43 1079 53 HOH WAT . 
F 5 HOH X 44 1080 55 HOH WAT . 
F 5 HOH X 45 1081 57 HOH WAT . 
F 5 HOH X 46 1082 58 HOH WAT . 
F 5 HOH X 47 1083 60 HOH WAT . 
F 5 HOH X 48 1084 61 HOH WAT . 
F 5 HOH X 49 1085 62 HOH WAT . 
F 5 HOH X 50 1086 63 HOH WAT . 
F 5 HOH X 51 1087 64 HOH WAT . 
F 5 HOH X 52 1088 65 HOH WAT . 
F 5 HOH X 53 1089 66 HOH WAT . 
F 5 HOH X 54 1090 68 HOH WAT . 
F 5 HOH X 55 1091 69 HOH WAT . 
F 5 HOH X 56 1092 70 HOH WAT . 
F 5 HOH X 57 1093 71 HOH WAT . 
F 5 HOH X 58 1094 73 HOH WAT . 
F 5 HOH X 59 1095 77 HOH WAT . 
F 5 HOH X 60 1096 78 HOH WAT . 
F 5 HOH X 61 1097 81 HOH WAT . 
F 5 HOH X 62 1098 83 HOH WAT . 
F 5 HOH X 63 1099 85 HOH WAT . 
F 5 HOH X 64 1100 86 HOH WAT . 
F 5 HOH X 65 1101 88 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 1BO . . . E 4 6.336 23.548 23.689 1 48.69 ? C1 1BO 209 X 1 
HETATM 2 C C2 1BO . . . E 4 4.893 23.638 23.255 1 49.6 ? C2 1BO 209 X 1 
HETATM 3 C C3 1BO . . . E 4 3.933 23.807 24.422 1 48.36 ? C3 1BO 209 X 1 
HETATM 4 C C4 1BO . . . E 4 3.188 22.513 24.716 1 48.13 ? C4 1BO 209 X 1 
HETATM 5 O OH 1BO . . . E 4 3.941 21.685 25.609 1 43.34 ? OH 1BO 209 X 1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#