data_1YOG # _model_server_result.job_id IxJNWcW1On5l1FXBzu2huw _model_server_result.datetime_utc '2024-11-14 05:56:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1yog # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":200}' # _entry.id 1YOG # _exptl.entry_id 1YOG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.08 _cell.angle_gamma 90 _cell.entry_id 1YOG _cell.length_a 64.71 _cell.length_b 30.78 _cell.length_c 34.87 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YOG _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NE2 _struct_conn.ptnr1_label_comp_id HIS _struct_conn.ptnr1_label_seq_id 93 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id HIS _struct_conn.ptnr1_auth_seq_id 93 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id CO _struct_conn.ptnr2_label_comp_id COH _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id COH _struct_conn.ptnr2_auth_seq_id 154 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.184 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 359 n n S O2 SO4 doub 360 n n S O3 SO4 sing 361 n n S O4 SO4 sing 362 n n # _atom_sites.entry_id 1YOG _atom_sites.fract_transf_matrix[1][1] 0.015454 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004455 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.032489 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029846 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 200 200 SO4 SO4 . C 3 COH A 1 154 154 COH COH . D 4 HOH A 1 155 155 HOH HOH . D 4 HOH A 2 156 156 HOH HOH . D 4 HOH A 3 201 201 HOH HOH . D 4 HOH A 4 202 202 HOH HOH . D 4 HOH A 5 203 203 HOH HOH . D 4 HOH A 6 204 204 HOH HOH . D 4 HOH A 7 205 205 HOH HOH . D 4 HOH A 8 206 206 HOH HOH . D 4 HOH A 9 207 207 HOH HOH . D 4 HOH A 10 208 208 HOH HOH . D 4 HOH A 11 209 209 HOH HOH . D 4 HOH A 12 210 210 HOH HOH . D 4 HOH A 13 211 211 HOH HOH . D 4 HOH A 14 212 212 HOH HOH . D 4 HOH A 15 213 213 HOH HOH . D 4 HOH A 16 214 214 HOH HOH . D 4 HOH A 17 215 215 HOH HOH . D 4 HOH A 18 216 216 HOH HOH . D 4 HOH A 19 217 217 HOH HOH . D 4 HOH A 20 218 218 HOH HOH . D 4 HOH A 21 219 219 HOH HOH . D 4 HOH A 22 220 220 HOH HOH . D 4 HOH A 23 221 221 HOH HOH . D 4 HOH A 24 222 222 HOH HOH . D 4 HOH A 25 223 223 HOH HOH . D 4 HOH A 26 224 224 HOH HOH . D 4 HOH A 27 225 225 HOH HOH . D 4 HOH A 28 226 226 HOH HOH . D 4 HOH A 29 227 227 HOH HOH . D 4 HOH A 30 228 228 HOH HOH . D 4 HOH A 31 229 229 HOH HOH . D 4 HOH A 32 230 230 HOH HOH . D 4 HOH A 33 231 231 HOH HOH . D 4 HOH A 34 232 232 HOH HOH . D 4 HOH A 35 233 233 HOH HOH . D 4 HOH A 36 234 234 HOH HOH . D 4 HOH A 37 235 235 HOH HOH . D 4 HOH A 38 236 236 HOH HOH . D 4 HOH A 39 237 237 HOH HOH . D 4 HOH A 40 238 238 HOH HOH . D 4 HOH A 41 239 239 HOH HOH . D 4 HOH A 42 240 240 HOH HOH . D 4 HOH A 43 241 241 HOH HOH . D 4 HOH A 44 242 242 HOH HOH . D 4 HOH A 45 243 243 HOH HOH . D 4 HOH A 46 244 244 HOH HOH . D 4 HOH A 47 245 245 HOH HOH . D 4 HOH A 48 246 246 HOH HOH . D 4 HOH A 49 247 247 HOH HOH . D 4 HOH A 50 248 248 HOH HOH . D 4 HOH A 51 249 249 HOH HOH . D 4 HOH A 52 250 250 HOH HOH . D 4 HOH A 53 251 251 HOH HOH . D 4 HOH A 54 252 252 HOH HOH . D 4 HOH A 55 253 253 HOH HOH . D 4 HOH A 56 254 254 HOH HOH . D 4 HOH A 57 255 255 HOH HOH . D 4 HOH A 58 256 256 HOH HOH . D 4 HOH A 59 257 257 HOH HOH . D 4 HOH A 60 258 258 HOH HOH . D 4 HOH A 61 259 259 HOH HOH . D 4 HOH A 62 260 260 HOH HOH . D 4 HOH A 63 261 261 HOH HOH . D 4 HOH A 64 262 262 HOH HOH . D 4 HOH A 65 263 263 HOH HOH . D 4 HOH A 66 264 264 HOH HOH . D 4 HOH A 67 265 265 HOH HOH . D 4 HOH A 68 266 266 HOH HOH . D 4 HOH A 69 267 267 HOH HOH . D 4 HOH A 70 268 268 HOH HOH . D 4 HOH A 71 269 269 HOH HOH . D 4 HOH A 72 270 270 HOH HOH . D 4 HOH A 73 271 271 HOH HOH . D 4 HOH A 74 272 272 HOH HOH . D 4 HOH A 75 273 273 HOH HOH . D 4 HOH A 76 274 274 HOH HOH . D 4 HOH A 77 275 275 HOH HOH . D 4 HOH A 78 276 276 HOH HOH . D 4 HOH A 79 277 277 HOH HOH . D 4 HOH A 80 278 278 HOH HOH . D 4 HOH A 81 279 279 HOH HOH . D 4 HOH A 82 280 280 HOH HOH . D 4 HOH A 83 281 281 HOH HOH . D 4 HOH A 84 282 282 HOH HOH . D 4 HOH A 85 283 283 HOH HOH . D 4 HOH A 86 284 284 HOH HOH . D 4 HOH A 87 285 285 HOH HOH . D 4 HOH A 88 286 286 HOH HOH . D 4 HOH A 89 287 287 HOH HOH . D 4 HOH A 90 288 288 HOH HOH . D 4 HOH A 91 289 289 HOH HOH . D 4 HOH A 92 290 290 HOH HOH . D 4 HOH A 93 291 291 HOH HOH . D 4 HOH A 94 292 292 HOH HOH . D 4 HOH A 95 293 293 HOH HOH . D 4 HOH A 96 294 294 HOH HOH . D 4 HOH A 97 295 295 HOH HOH . D 4 HOH A 98 296 296 HOH HOH . D 4 HOH A 99 297 297 HOH HOH . D 4 HOH A 100 298 298 HOH HOH . D 4 HOH A 101 299 299 HOH HOH . D 4 HOH A 102 300 300 HOH HOH . D 4 HOH A 103 301 301 HOH HOH . D 4 HOH A 104 302 302 HOH HOH . D 4 HOH A 105 303 303 HOH HOH . D 4 HOH A 106 304 304 HOH HOH . D 4 HOH A 107 305 305 HOH HOH . D 4 HOH A 108 306 306 HOH HOH . D 4 HOH A 109 307 307 HOH HOH . D 4 HOH A 110 308 308 HOH HOH . D 4 HOH A 111 309 309 HOH HOH . D 4 HOH A 112 310 310 HOH HOH . D 4 HOH A 113 311 311 HOH HOH . D 4 HOH A 114 312 312 HOH HOH . D 4 HOH A 115 313 313 HOH HOH . D 4 HOH A 116 314 314 HOH HOH . D 4 HOH A 117 315 315 HOH HOH . D 4 HOH A 118 316 316 HOH HOH . D 4 HOH A 119 317 317 HOH HOH . D 4 HOH A 120 318 318 HOH HOH . D 4 HOH A 121 319 319 HOH HOH . D 4 HOH A 122 320 320 HOH HOH . D 4 HOH A 123 321 321 HOH HOH . D 4 HOH A 124 322 322 HOH HOH . D 4 HOH A 125 323 323 HOH HOH . D 4 HOH A 126 324 324 HOH HOH . D 4 HOH A 127 325 325 HOH HOH . D 4 HOH A 128 326 326 HOH HOH . D 4 HOH A 129 327 327 HOH HOH . D 4 HOH A 130 328 328 HOH HOH . D 4 HOH A 131 329 329 HOH HOH . D 4 HOH A 132 330 330 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 32.806 29.678 4.374 1 18.2 ? S SO4 200 A 1 HETATM 2 O O1 SO4 . . . B 2 32.08 30.158 5.483 1 16.7 ? O1 SO4 200 A 1 HETATM 3 O O2 SO4 . . . B 2 33.633 30.462 3.487 1 19.4 ? O2 SO4 200 A 1 HETATM 4 O O3 SO4 . . . B 2 31.857 29.075 3.368 1 21.4 ? O3 SO4 200 A 1 HETATM 5 O O4 SO4 . . . B 2 33.652 28.659 5.033 1 21.1 ? O4 SO4 200 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #