data_1YTO
#
_model_server_result.job_id            u7XXzCMQXKktO3qP7LNqwg 
_model_server_result.datetime_utc      '2024-10-18 16:30:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1yto 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":1162}' 
#
_entry.id    1YTO 
#
_exptl.entry_id    1YTO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              46.025 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FORMIC ACID' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107.19 
_cell.angle_gamma         90 
_cell.entry_id            1YTO 
_cell.length_a            51.39 
_cell.length_b            109.17 
_cell.length_c            68.98 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1YTO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,L 1 1 
B,M 2 1 
C,H,N 3 1 
D,I,J,K,O 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 K N N 
#
_chem_comp.formula           'C H2 O2' 
_chem_comp.formula_weight    46.025 
_chem_comp.id                FMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FORMIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O1 FMT doub 83 n n 
C O2 FMT sing 84 n n 
C H FMT sing 85 n n 
O2 HO2 FMT sing 86 n n 
#
_atom_sites.entry_id                     1YTO 
_atom_sites.fract_transf_matrix[1][1]    0.019459 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00602 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00916 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015175 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SO4 A 1 200 200 SO4 SO4 . 
F 2 SO4 A 1 201 201 SO4 SO4 . 
G 3 FMT A 1 1160 1160 FMT FMT . 
H 3 FMT C 1 1161 1161 FMT FMT . 
I 2 SO4 D 1 202 202 SO4 SO4 . 
J 2 SO4 D 1 203 203 SO4 SO4 . 
K 3 FMT D 1 1162 1162 FMT FMT . 
L 4 HOH A 1 501 501 HOH HOH . 
L 4 HOH A 2 502 502 HOH HOH . 
L 4 HOH A 3 507 507 HOH HOH . 
L 4 HOH A 4 510 510 HOH HOH . 
L 4 HOH A 5 511 511 HOH HOH . 
L 4 HOH A 6 512 512 HOH HOH . 
L 4 HOH A 7 514 514 HOH HOH . 
L 4 HOH A 8 520 520 HOH HOH . 
L 4 HOH A 9 526 526 HOH HOH . 
L 4 HOH A 10 529 529 HOH HOH . 
L 4 HOH A 11 531 531 HOH HOH . 
L 4 HOH A 12 537 537 HOH HOH . 
L 4 HOH A 13 538 538 HOH HOH . 
L 4 HOH A 14 539 539 HOH HOH . 
L 4 HOH A 15 550 550 HOH HOH . 
L 4 HOH A 16 551 551 HOH HOH . 
L 4 HOH A 17 552 552 HOH HOH . 
L 4 HOH A 18 553 553 HOH HOH . 
L 4 HOH A 19 559 559 HOH HOH . 
L 4 HOH A 20 562 562 HOH HOH . 
L 4 HOH A 21 564 564 HOH HOH . 
L 4 HOH A 22 569 569 HOH HOH . 
L 4 HOH A 23 573 573 HOH HOH . 
L 4 HOH A 24 580 580 HOH HOH . 
L 4 HOH A 25 582 582 HOH HOH . 
L 4 HOH A 26 584 584 HOH HOH . 
L 4 HOH A 27 586 586 HOH HOH . 
L 4 HOH A 28 590 590 HOH HOH . 
L 4 HOH A 29 591 591 HOH HOH . 
L 4 HOH A 30 592 592 HOH HOH . 
L 4 HOH A 31 598 598 HOH HOH . 
L 4 HOH A 32 599 599 HOH HOH . 
L 4 HOH A 33 604 604 HOH HOH . 
L 4 HOH A 34 607 607 HOH HOH . 
L 4 HOH A 35 610 610 HOH HOH . 
L 4 HOH A 36 611 611 HOH HOH . 
L 4 HOH A 37 620 620 HOH HOH . 
L 4 HOH A 38 622 622 HOH HOH . 
L 4 HOH A 39 624 624 HOH HOH . 
L 4 HOH A 40 627 627 HOH HOH . 
L 4 HOH A 41 628 628 HOH HOH . 
L 4 HOH A 42 632 632 HOH HOH . 
L 4 HOH A 43 638 638 HOH HOH . 
L 4 HOH A 44 642 642 HOH HOH . 
L 4 HOH A 45 644 644 HOH HOH . 
L 4 HOH A 46 645 645 HOH HOH . 
L 4 HOH A 47 650 650 HOH HOH . 
L 4 HOH A 48 653 653 HOH HOH . 
L 4 HOH A 49 658 658 HOH HOH . 
L 4 HOH A 50 659 659 HOH HOH . 
L 4 HOH A 51 660 660 HOH HOH . 
L 4 HOH A 52 661 661 HOH HOH . 
L 4 HOH A 53 662 662 HOH HOH . 
L 4 HOH A 54 663 663 HOH HOH . 
L 4 HOH A 55 671 671 HOH HOH . 
L 4 HOH A 56 675 675 HOH HOH . 
L 4 HOH A 57 682 682 HOH HOH . 
L 4 HOH A 58 683 683 HOH HOH . 
L 4 HOH A 59 685 685 HOH HOH . 
L 4 HOH A 60 686 686 HOH HOH . 
L 4 HOH A 61 697 697 HOH HOH . 
L 4 HOH A 62 700 700 HOH HOH . 
L 4 HOH A 63 702 702 HOH HOH . 
L 4 HOH A 64 703 703 HOH HOH . 
L 4 HOH A 65 706 706 HOH HOH . 
L 4 HOH A 66 711 711 HOH HOH . 
L 4 HOH A 67 713 713 HOH HOH . 
L 4 HOH A 68 719 719 HOH HOH . 
L 4 HOH A 69 724 724 HOH HOH . 
L 4 HOH A 70 730 730 HOH HOH . 
L 4 HOH A 71 731 731 HOH HOH . 
L 4 HOH A 72 732 732 HOH HOH . 
M 4 HOH B 1 500 500 HOH HOH . 
M 4 HOH B 2 504 504 HOH HOH . 
M 4 HOH B 3 517 517 HOH HOH . 
M 4 HOH B 4 518 518 HOH HOH . 
M 4 HOH B 5 521 521 HOH HOH . 
M 4 HOH B 6 522 522 HOH HOH . 
M 4 HOH B 7 523 523 HOH HOH . 
M 4 HOH B 8 524 524 HOH HOH . 
M 4 HOH B 9 528 528 HOH HOH . 
M 4 HOH B 10 533 533 HOH HOH . 
M 4 HOH B 11 540 540 HOH HOH . 
M 4 HOH B 12 541 541 HOH HOH . 
M 4 HOH B 13 544 544 HOH HOH . 
M 4 HOH B 14 546 546 HOH HOH . 
M 4 HOH B 15 554 554 HOH HOH . 
M 4 HOH B 16 568 568 HOH HOH . 
M 4 HOH B 17 571 571 HOH HOH . 
M 4 HOH B 18 577 577 HOH HOH . 
M 4 HOH B 19 578 578 HOH HOH . 
M 4 HOH B 20 585 585 HOH HOH . 
M 4 HOH B 21 587 587 HOH HOH . 
M 4 HOH B 22 595 595 HOH HOH . 
M 4 HOH B 23 606 606 HOH HOH . 
M 4 HOH B 24 608 608 HOH HOH . 
M 4 HOH B 25 612 612 HOH HOH . 
M 4 HOH B 26 614 614 HOH HOH . 
M 4 HOH B 27 616 616 HOH HOH . 
M 4 HOH B 28 617 617 HOH HOH . 
M 4 HOH B 29 618 618 HOH HOH . 
M 4 HOH B 30 625 625 HOH HOH . 
M 4 HOH B 31 634 634 HOH HOH . 
M 4 HOH B 32 639 639 HOH HOH . 
M 4 HOH B 33 640 640 HOH HOH . 
M 4 HOH B 34 646 646 HOH HOH . 
M 4 HOH B 35 647 647 HOH HOH . 
M 4 HOH B 36 652 652 HOH HOH . 
M 4 HOH B 37 665 665 HOH HOH . 
M 4 HOH B 38 666 666 HOH HOH . 
M 4 HOH B 39 669 669 HOH HOH . 
M 4 HOH B 40 670 670 HOH HOH . 
M 4 HOH B 41 673 673 HOH HOH . 
M 4 HOH B 42 674 674 HOH HOH . 
M 4 HOH B 43 687 687 HOH HOH . 
M 4 HOH B 44 694 694 HOH HOH . 
M 4 HOH B 45 696 696 HOH HOH . 
M 4 HOH B 46 704 704 HOH HOH . 
M 4 HOH B 47 708 708 HOH HOH . 
M 4 HOH B 48 709 709 HOH HOH . 
M 4 HOH B 49 714 714 HOH HOH . 
M 4 HOH B 50 720 720 HOH HOH . 
M 4 HOH B 51 726 726 HOH HOH . 
N 4 HOH C 1 505 505 HOH HOH . 
N 4 HOH C 2 508 508 HOH HOH . 
N 4 HOH C 3 515 515 HOH HOH . 
N 4 HOH C 4 516 516 HOH HOH . 
N 4 HOH C 5 519 519 HOH HOH . 
N 4 HOH C 6 527 527 HOH HOH . 
N 4 HOH C 7 543 543 HOH HOH . 
N 4 HOH C 8 548 548 HOH HOH . 
N 4 HOH C 9 549 549 HOH HOH . 
N 4 HOH C 10 556 556 HOH HOH . 
N 4 HOH C 11 557 557 HOH HOH . 
N 4 HOH C 12 561 561 HOH HOH . 
N 4 HOH C 13 563 563 HOH HOH . 
N 4 HOH C 14 565 565 HOH HOH . 
N 4 HOH C 15 566 566 HOH HOH . 
N 4 HOH C 16 567 567 HOH HOH . 
N 4 HOH C 17 572 572 HOH HOH . 
N 4 HOH C 18 574 574 HOH HOH . 
N 4 HOH C 19 575 575 HOH HOH . 
N 4 HOH C 20 581 581 HOH HOH . 
N 4 HOH C 21 593 593 HOH HOH . 
N 4 HOH C 22 600 600 HOH HOH . 
N 4 HOH C 23 601 601 HOH HOH . 
N 4 HOH C 24 609 609 HOH HOH . 
N 4 HOH C 25 613 613 HOH HOH . 
N 4 HOH C 26 615 615 HOH HOH . 
N 4 HOH C 27 621 621 HOH HOH . 
N 4 HOH C 28 631 631 HOH HOH . 
N 4 HOH C 29 637 637 HOH HOH . 
N 4 HOH C 30 643 643 HOH HOH . 
N 4 HOH C 31 654 654 HOH HOH . 
N 4 HOH C 32 656 656 HOH HOH . 
N 4 HOH C 33 657 657 HOH HOH . 
N 4 HOH C 34 664 664 HOH HOH . 
N 4 HOH C 35 676 676 HOH HOH . 
N 4 HOH C 36 677 677 HOH HOH . 
N 4 HOH C 37 684 684 HOH HOH . 
N 4 HOH C 38 688 688 HOH HOH . 
N 4 HOH C 39 689 689 HOH HOH . 
N 4 HOH C 40 691 691 HOH HOH . 
N 4 HOH C 41 693 693 HOH HOH . 
N 4 HOH C 42 699 699 HOH HOH . 
N 4 HOH C 43 701 701 HOH HOH . 
N 4 HOH C 44 707 707 HOH HOH . 
N 4 HOH C 45 710 710 HOH HOH . 
N 4 HOH C 46 712 712 HOH HOH . 
N 4 HOH C 47 715 715 HOH HOH . 
N 4 HOH C 48 718 718 HOH HOH . 
N 4 HOH C 49 721 721 HOH HOH . 
N 4 HOH C 50 722 722 HOH HOH . 
N 4 HOH C 51 723 723 HOH HOH . 
N 4 HOH C 52 725 725 HOH HOH . 
N 4 HOH C 53 729 729 HOH HOH . 
O 4 HOH D 1 503 503 HOH HOH . 
O 4 HOH D 2 506 506 HOH HOH . 
O 4 HOH D 3 509 509 HOH HOH . 
O 4 HOH D 4 513 513 HOH HOH . 
O 4 HOH D 5 525 525 HOH HOH . 
O 4 HOH D 6 530 530 HOH HOH . 
O 4 HOH D 7 532 532 HOH HOH . 
O 4 HOH D 8 534 534 HOH HOH . 
O 4 HOH D 9 535 535 HOH HOH . 
O 4 HOH D 10 536 536 HOH HOH . 
O 4 HOH D 11 542 542 HOH HOH . 
O 4 HOH D 12 545 545 HOH HOH . 
O 4 HOH D 13 547 547 HOH HOH . 
O 4 HOH D 14 555 555 HOH HOH . 
O 4 HOH D 15 558 558 HOH HOH . 
O 4 HOH D 16 560 560 HOH HOH . 
O 4 HOH D 17 570 570 HOH HOH . 
O 4 HOH D 18 576 576 HOH HOH . 
O 4 HOH D 19 579 579 HOH HOH . 
O 4 HOH D 20 583 583 HOH HOH . 
O 4 HOH D 21 588 588 HOH HOH . 
O 4 HOH D 22 589 589 HOH HOH . 
O 4 HOH D 23 594 594 HOH HOH . 
O 4 HOH D 24 596 596 HOH HOH . 
O 4 HOH D 25 602 602 HOH HOH . 
O 4 HOH D 26 603 603 HOH HOH . 
O 4 HOH D 27 605 605 HOH HOH . 
O 4 HOH D 28 619 619 HOH HOH . 
O 4 HOH D 29 623 623 HOH HOH . 
O 4 HOH D 30 626 626 HOH HOH . 
O 4 HOH D 31 629 629 HOH HOH . 
O 4 HOH D 32 630 630 HOH HOH . 
O 4 HOH D 33 633 633 HOH HOH . 
O 4 HOH D 34 635 635 HOH HOH . 
O 4 HOH D 35 636 636 HOH HOH . 
O 4 HOH D 36 641 641 HOH HOH . 
O 4 HOH D 37 648 648 HOH HOH . 
O 4 HOH D 38 649 649 HOH HOH . 
O 4 HOH D 39 651 651 HOH HOH . 
O 4 HOH D 40 655 655 HOH HOH . 
O 4 HOH D 41 667 667 HOH HOH . 
O 4 HOH D 42 668 668 HOH HOH . 
O 4 HOH D 43 672 672 HOH HOH . 
O 4 HOH D 44 678 678 HOH HOH . 
O 4 HOH D 45 679 679 HOH HOH . 
O 4 HOH D 46 680 680 HOH HOH . 
O 4 HOH D 47 681 681 HOH HOH . 
O 4 HOH D 48 690 690 HOH HOH . 
O 4 HOH D 49 692 692 HOH HOH . 
O 4 HOH D 50 695 695 HOH HOH . 
O 4 HOH D 51 698 698 HOH HOH . 
O 4 HOH D 52 716 716 HOH HOH . 
O 4 HOH D 53 727 727 HOH HOH . 
O 4 HOH D 54 728 728 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C FMT . . . K 3 40.004 -10.22 36.041 1 47.74 ? C FMT 1162 D 1 
HETATM 2 O O1 FMT . . . K 3 39.546 -11.371 36.931 1 45.98 ? O1 FMT 1162 D 1 
HETATM 3 O O2 FMT . . . K 3 41 -10.669 34.935 1 33.89 ? O2 FMT 1162 D 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           335 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           3 
#