data_1YU9
#
_model_server_result.job_id            HLvuyj6cCEM-s6swuIFZew 
_model_server_result.datetime_utc      '2024-11-16 07:34:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1yu9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":701}' 
#
_entry.id    1YU9 
#
_exptl.entry_id    1YU9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1YU9 
_cell.length_a            68.808 
_cell.length_b            68.808 
_cell.length_c            90.92 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1YU9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PQS monomeric 1 author_and_software_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1 
A,B,C,D,E,F 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 68.808 68.808 45.46 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 25 A SER 22 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
metalc ? metalc2 A OG1 THR 43 A THR 40 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
metalc ? metalc3 E O2G GNP . A GNP 700 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? 
metalc ? metalc4 E O2B GNP . A GNP 700 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
metalc ? metalc5 B MG MG . A MG 701 1_555 F O HOH . A HOH 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? 
metalc ? metalc6 B MG MG . A MG 701 1_555 F O HOH . A HOH 716 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1YU9 
_atom_sites.fract_transf_matrix[1][1]    0.014533 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014533 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010999 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 701 701 MG MG . 
C 3 SO4 A 1 601 601 SO4 SO4 . 
D 3 SO4 A 1 602 602 SO4 SO4 . 
E 4 GNP A 1 700 700 GNP GNP . 
F 5 HOH A 1 702 2 HOH HOH . 
F 5 HOH A 2 703 3 HOH HOH . 
F 5 HOH A 3 704 4 HOH HOH . 
F 5 HOH A 4 705 5 HOH HOH . 
F 5 HOH A 5 706 6 HOH HOH . 
F 5 HOH A 6 707 8 HOH HOH . 
F 5 HOH A 7 708 10 HOH HOH . 
F 5 HOH A 8 709 11 HOH HOH . 
F 5 HOH A 9 710 12 HOH HOH . 
F 5 HOH A 10 711 13 HOH HOH . 
F 5 HOH A 11 712 14 HOH HOH . 
F 5 HOH A 12 713 16 HOH HOH . 
F 5 HOH A 13 714 17 HOH HOH . 
F 5 HOH A 14 715 18 HOH HOH . 
F 5 HOH A 15 716 19 HOH HOH . 
F 5 HOH A 16 717 20 HOH HOH . 
F 5 HOH A 17 718 21 HOH HOH . 
F 5 HOH A 18 719 22 HOH HOH . 
F 5 HOH A 19 720 23 HOH HOH . 
F 5 HOH A 20 721 24 HOH HOH . 
F 5 HOH A 21 722 25 HOH HOH . 
F 5 HOH A 22 723 26 HOH HOH . 
F 5 HOH A 23 724 28 HOH HOH . 
F 5 HOH A 24 725 29 HOH HOH . 
F 5 HOH A 25 726 30 HOH HOH . 
F 5 HOH A 26 727 31 HOH HOH . 
F 5 HOH A 27 728 32 HOH HOH . 
F 5 HOH A 28 729 33 HOH HOH . 
F 5 HOH A 29 730 34 HOH HOH . 
F 5 HOH A 30 731 35 HOH HOH . 
F 5 HOH A 31 732 37 HOH HOH . 
F 5 HOH A 32 733 38 HOH HOH . 
F 5 HOH A 33 734 39 HOH HOH . 
F 5 HOH A 34 735 40 HOH HOH . 
F 5 HOH A 35 736 44 HOH HOH . 
F 5 HOH A 36 737 45 HOH HOH . 
F 5 HOH A 37 738 47 HOH HOH . 
F 5 HOH A 38 739 48 HOH HOH . 
F 5 HOH A 39 740 49 HOH HOH . 
F 5 HOH A 40 741 50 HOH HOH . 
F 5 HOH A 41 742 51 HOH HOH . 
F 5 HOH A 42 743 53 HOH HOH . 
F 5 HOH A 43 744 54 HOH HOH . 
F 5 HOH A 44 745 55 HOH HOH . 
F 5 HOH A 45 746 56 HOH HOH . 
F 5 HOH A 46 747 57 HOH HOH . 
F 5 HOH A 47 748 58 HOH HOH . 
F 5 HOH A 48 749 60 HOH HOH . 
F 5 HOH A 49 750 61 HOH HOH . 
F 5 HOH A 50 751 62 HOH HOH . 
F 5 HOH A 51 752 63 HOH HOH . 
F 5 HOH A 52 753 64 HOH HOH . 
F 5 HOH A 53 754 65 HOH HOH . 
F 5 HOH A 54 755 67 HOH HOH . 
F 5 HOH A 55 756 69 HOH HOH . 
F 5 HOH A 56 757 70 HOH HOH . 
F 5 HOH A 57 758 71 HOH HOH . 
F 5 HOH A 58 759 73 HOH HOH . 
F 5 HOH A 59 760 74 HOH HOH . 
F 5 HOH A 60 761 75 HOH HOH . 
F 5 HOH A 61 762 76 HOH HOH . 
F 5 HOH A 62 763 78 HOH HOH . 
F 5 HOH A 63 764 79 HOH HOH . 
F 5 HOH A 64 765 80 HOH HOH . 
F 5 HOH A 65 766 82 HOH HOH . 
F 5 HOH A 66 767 83 HOH HOH . 
F 5 HOH A 67 768 84 HOH HOH . 
F 5 HOH A 68 769 86 HOH HOH . 
F 5 HOH A 69 770 87 HOH HOH . 
F 5 HOH A 70 771 88 HOH HOH . 
F 5 HOH A 71 772 89 HOH HOH . 
F 5 HOH A 72 773 90 HOH HOH . 
F 5 HOH A 73 774 91 HOH HOH . 
F 5 HOH A 74 775 92 HOH HOH . 
F 5 HOH A 75 776 94 HOH HOH . 
F 5 HOH A 76 777 96 HOH HOH . 
F 5 HOH A 77 778 98 HOH HOH . 
F 5 HOH A 78 779 99 HOH HOH . 
F 5 HOH A 79 780 101 HOH HOH . 
F 5 HOH A 80 781 102 HOH HOH . 
F 5 HOH A 81 782 105 HOH HOH . 
F 5 HOH A 82 783 106 HOH HOH . 
F 5 HOH A 83 784 107 HOH HOH . 
F 5 HOH A 84 785 108 HOH HOH . 
F 5 HOH A 85 786 109 HOH HOH . 
F 5 HOH A 86 787 110 HOH HOH . 
F 5 HOH A 87 788 111 HOH HOH . 
F 5 HOH A 88 789 112 HOH HOH . 
F 5 HOH A 89 790 113 HOH HOH . 
F 5 HOH A 90 791 114 HOH HOH . 
F 5 HOH A 91 792 116 HOH HOH . 
F 5 HOH A 92 793 117 HOH HOH . 
F 5 HOH A 93 794 119 HOH HOH . 
F 5 HOH A 94 795 120 HOH HOH . 
F 5 HOH A 95 796 121 HOH HOH . 
F 5 HOH A 96 797 122 HOH HOH . 
F 5 HOH A 97 798 123 HOH HOH . 
F 5 HOH A 98 799 125 HOH HOH . 
F 5 HOH A 99 800 127 HOH HOH . 
F 5 HOH A 100 801 129 HOH HOH . 
F 5 HOH A 101 802 131 HOH HOH . 
F 5 HOH A 102 803 133 HOH HOH . 
F 5 HOH A 103 804 134 HOH HOH . 
F 5 HOH A 104 805 135 HOH HOH . 
F 5 HOH A 105 806 136 HOH HOH . 
F 5 HOH A 106 807 137 HOH HOH . 
F 5 HOH A 107 808 138 HOH HOH . 
F 5 HOH A 108 809 139 HOH HOH . 
F 5 HOH A 109 810 140 HOH HOH . 
F 5 HOH A 110 811 141 HOH HOH . 
F 5 HOH A 111 812 145 HOH HOH . 
F 5 HOH A 112 813 146 HOH HOH . 
F 5 HOH A 113 814 147 HOH HOH . 
F 5 HOH A 114 815 149 HOH HOH . 
F 5 HOH A 115 816 150 HOH HOH . 
F 5 HOH A 116 817 151 HOH HOH . 
F 5 HOH A 117 818 152 HOH HOH . 
F 5 HOH A 118 819 154 HOH HOH . 
F 5 HOH A 119 820 155 HOH HOH . 
F 5 HOH A 120 821 156 HOH HOH . 
F 5 HOH A 121 822 157 HOH HOH . 
F 5 HOH A 122 823 158 HOH HOH . 
F 5 HOH A 123 824 159 HOH HOH . 
F 5 HOH A 124 825 161 HOH HOH . 
F 5 HOH A 125 826 162 HOH HOH . 
F 5 HOH A 126 827 164 HOH HOH . 
F 5 HOH A 127 828 165 HOH HOH . 
F 5 HOH A 128 829 166 HOH HOH . 
F 5 HOH A 129 830 167 HOH HOH . 
F 5 HOH A 130 831 168 HOH HOH . 
F 5 HOH A 131 832 169 HOH HOH . 
F 5 HOH A 132 833 170 HOH HOH . 
F 5 HOH A 133 834 171 HOH HOH . 
F 5 HOH A 134 835 172 HOH HOH . 
F 5 HOH A 135 836 173 HOH HOH . 
F 5 HOH A 136 837 174 HOH HOH . 
F 5 HOH A 137 838 175 HOH HOH . 
F 5 HOH A 138 839 176 HOH HOH . 
F 5 HOH A 139 840 177 HOH HOH . 
F 5 HOH A 140 841 179 HOH HOH . 
F 5 HOH A 141 842 180 HOH HOH . 
F 5 HOH A 142 843 181 HOH HOH . 
F 5 HOH A 143 844 183 HOH HOH . 
F 5 HOH A 144 845 184 HOH HOH . 
F 5 HOH A 145 846 186 HOH HOH . 
F 5 HOH A 146 847 187 HOH HOH . 
F 5 HOH A 147 848 188 HOH HOH . 
F 5 HOH A 148 849 189 HOH HOH . 
F 5 HOH A 149 850 190 HOH HOH . 
F 5 HOH A 150 851 191 HOH HOH . 
F 5 HOH A 151 852 192 HOH HOH . 
F 5 HOH A 152 853 194 HOH HOH . 
F 5 HOH A 153 854 195 HOH HOH . 
F 5 HOH A 154 855 196 HOH HOH . 
F 5 HOH A 155 856 197 HOH HOH . 
F 5 HOH A 156 857 198 HOH HOH . 
F 5 HOH A 157 858 199 HOH HOH . 
F 5 HOH A 158 859 200 HOH HOH . 
F 5 HOH A 159 860 201 HOH HOH . 
F 5 HOH A 160 861 202 HOH HOH . 
F 5 HOH A 161 862 203 HOH HOH . 
F 5 HOH A 162 863 205 HOH HOH . 
F 5 HOH A 163 864 207 HOH HOH . 
F 5 HOH A 164 865 208 HOH HOH . 
F 5 HOH A 165 866 209 HOH HOH . 
F 5 HOH A 166 867 211 HOH HOH . 
F 5 HOH A 167 868 213 HOH HOH . 
F 5 HOH A 168 869 215 HOH HOH . 
F 5 HOH A 169 870 216 HOH HOH . 
F 5 HOH A 170 871 220 HOH HOH . 
F 5 HOH A 171 872 221 HOH HOH . 
F 5 HOH A 172 873 222 HOH HOH . 
F 5 HOH A 173 874 224 HOH HOH . 
F 5 HOH A 174 875 226 HOH HOH . 
F 5 HOH A 175 876 232 HOH HOH . 
F 5 HOH A 176 877 233 HOH HOH . 
F 5 HOH A 177 878 235 HOH HOH . 
F 5 HOH A 178 879 236 HOH HOH . 
F 5 HOH A 179 880 237 HOH HOH . 
F 5 HOH A 180 881 238 HOH HOH . 
F 5 HOH A 181 882 239 HOH HOH . 
F 5 HOH A 182 883 245 HOH HOH . 
F 5 HOH A 183 884 251 HOH HOH . 
F 5 HOH A 184 885 252 HOH HOH . 
F 5 HOH A 185 886 253 HOH HOH . 
F 5 HOH A 186 887 255 HOH HOH . 
F 5 HOH A 187 888 265 HOH HOH . 
F 5 HOH A 188 889 266 HOH HOH . 
F 5 HOH A 189 890 267 HOH HOH . 
F 5 HOH A 190 891 269 HOH HOH . 
F 5 HOH A 191 892 273 HOH HOH . 
F 5 HOH A 192 893 274 HOH HOH . 
F 5 HOH A 193 894 276 HOH HOH . 
F 5 HOH A 194 895 277 HOH HOH . 
F 5 HOH A 195 896 281 HOH HOH . 
F 5 HOH A 196 897 283 HOH HOH . 
F 5 HOH A 197 898 284 HOH HOH . 
F 5 HOH A 198 899 285 HOH HOH . 
F 5 HOH A 199 900 289 HOH HOH . 
F 5 HOH A 200 901 291 HOH HOH . 
F 5 HOH A 201 902 292 HOH HOH . 
F 5 HOH A 202 903 293 HOH HOH . 
F 5 HOH A 203 904 294 HOH HOH . 
F 5 HOH A 204 905 296 HOH HOH . 
F 5 HOH A 205 906 300 HOH HOH . 
F 5 HOH A 206 907 304 HOH HOH . 
F 5 HOH A 207 908 306 HOH HOH . 
F 5 HOH A 208 909 313 HOH HOH . 
F 5 HOH A 209 910 322 HOH HOH . 
F 5 HOH A 210 911 323 HOH HOH . 
F 5 HOH A 211 912 326 HOH HOH . 
F 5 HOH A 212 913 328 HOH HOH . 
F 5 HOH A 213 914 331 HOH HOH . 
F 5 HOH A 214 915 334 HOH HOH . 
F 5 HOH A 215 916 340 HOH HOH . 
F 5 HOH A 216 917 342 HOH HOH . 
F 5 HOH A 217 918 349 HOH HOH . 
F 5 HOH A 218 919 357 HOH HOH . 
F 5 HOH A 219 920 360 HOH HOH . 
F 5 HOH A 220 921 364 HOH HOH . 
F 5 HOH A 221 922 366 HOH HOH . 
F 5 HOH A 222 923 368 HOH HOH . 
F 5 HOH A 223 924 380 HOH HOH . 
F 5 HOH A 224 925 381 HOH HOH . 
F 5 HOH A 225 926 385 HOH HOH . 
F 5 HOH A 226 927 390 HOH HOH . 
F 5 HOH A 227 928 396 HOH HOH . 
F 5 HOH A 228 929 408 HOH HOH . 
F 5 HOH A 229 930 429 HOH HOH . 
F 5 HOH A 230 931 447 HOH HOH . 
F 5 HOH A 231 932 465 HOH HOH . 
F 5 HOH A 232 933 491 HOH HOH . 
F 5 HOH A 233 934 493 HOH HOH . 
F 5 HOH A 234 935 519 HOH HOH . 
F 5 HOH A 235 936 548 HOH HOH . 
F 5 HOH A 236 937 550 HOH HOH . 
F 5 HOH A 237 938 553 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               44.56 
_atom_site.Cartn_y               24.734 
_atom_site.Cartn_z               31.801 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        18.13 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           701 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#