data_1YV4
#
_model_server_result.job_id            CtCwNqQn-KOBId_kb9VevQ 
_model_server_result.datetime_utc      '2025-03-03 00:18:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1yv4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    1YV4 
#
_exptl.entry_id    1YV4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1YV4 
_cell.length_a            32.29 
_cell.length_b            38.544 
_cell.length_c            69.096 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1YV4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 19 A CYS 19 1_555 A SG CYS 68 A CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 75 A CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf3 A SG CYS 48 A CYS 48 1_555 A SG CYS 90 A CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf4 A SG CYS 87 A CYS 87 1_555 A SG CYS 104 A CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
covale ? covale1 A C PCA 1 A PCA 1 1_555 A N ASP 2 A ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.363 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 306 n n 
S O2 SO4 doub 307 n n 
S O3 SO4 sing 308 n n 
S O4 SO4 sing 309 n n 
#
_atom_sites.entry_id                     1YV4 
_atom_sites.fract_transf_matrix[1][1]    0.03097 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02594 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01447 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 501 501 SO4 SO4 . 
C 2 SO4 A 1 701 701 SO4 SO4 . 
D 2 SO4 A 1 901 901 SO4 SO4 . 
E 3 HOH A 1 503 503 HOH WAT . 
E 3 HOH A 2 504 504 HOH WAT . 
E 3 HOH A 3 505 505 HOH WAT . 
E 3 HOH A 4 506 506 HOH WAT . 
E 3 HOH A 5 507 507 HOH WAT . 
E 3 HOH A 6 508 508 HOH WAT . 
E 3 HOH A 7 509 509 HOH WAT . 
E 3 HOH A 8 510 510 HOH WAT . 
E 3 HOH A 9 511 511 HOH WAT . 
E 3 HOH A 10 512 512 HOH WAT . 
E 3 HOH A 11 513 513 HOH WAT . 
E 3 HOH A 12 514 514 HOH WAT . 
E 3 HOH A 13 515 515 HOH WAT . 
E 3 HOH A 14 516 516 HOH WAT . 
E 3 HOH A 15 517 517 HOH WAT . 
E 3 HOH A 16 518 518 HOH WAT . 
E 3 HOH A 17 519 519 HOH WAT . 
E 3 HOH A 18 520 520 HOH WAT . 
E 3 HOH A 19 521 521 HOH WAT . 
E 3 HOH A 20 522 522 HOH WAT . 
E 3 HOH A 21 523 523 HOH WAT . 
E 3 HOH A 22 524 524 HOH WAT . 
E 3 HOH A 23 525 525 HOH WAT . 
E 3 HOH A 24 526 526 HOH WAT . 
E 3 HOH A 25 527 527 HOH WAT . 
E 3 HOH A 26 529 529 HOH WAT . 
E 3 HOH A 27 530 530 HOH WAT . 
E 3 HOH A 28 531 531 HOH WAT . 
E 3 HOH A 29 532 532 HOH WAT . 
E 3 HOH A 30 533 533 HOH WAT . 
E 3 HOH A 31 534 534 HOH WAT . 
E 3 HOH A 32 535 535 HOH WAT . 
E 3 HOH A 33 536 536 HOH WAT . 
E 3 HOH A 34 537 537 HOH WAT . 
E 3 HOH A 35 538 538 HOH WAT . 
E 3 HOH A 36 539 539 HOH WAT . 
E 3 HOH A 37 540 540 HOH WAT . 
E 3 HOH A 38 541 541 HOH WAT . 
E 3 HOH A 39 542 542 HOH WAT . 
E 3 HOH A 40 543 543 HOH WAT . 
E 3 HOH A 41 544 544 HOH WAT . 
E 3 HOH A 42 545 545 HOH WAT . 
E 3 HOH A 43 546 546 HOH WAT . 
E 3 HOH A 44 547 547 HOH WAT . 
E 3 HOH A 45 548 548 HOH WAT . 
E 3 HOH A 46 549 549 HOH WAT . 
E 3 HOH A 47 550 550 HOH WAT . 
E 3 HOH A 48 552 552 HOH WAT . 
E 3 HOH A 49 553 553 HOH WAT . 
E 3 HOH A 50 554 554 HOH WAT . 
E 3 HOH A 51 555 555 HOH WAT . 
E 3 HOH A 52 556 556 HOH WAT . 
E 3 HOH A 53 557 557 HOH WAT . 
E 3 HOH A 54 558 558 HOH WAT . 
E 3 HOH A 55 559 559 HOH WAT . 
E 3 HOH A 56 560 560 HOH WAT . 
E 3 HOH A 57 561 561 HOH WAT . 
E 3 HOH A 58 562 562 HOH WAT . 
E 3 HOH A 59 563 563 HOH WAT . 
E 3 HOH A 60 564 564 HOH WAT . 
E 3 HOH A 61 565 565 HOH WAT . 
E 3 HOH A 62 566 566 HOH WAT . 
E 3 HOH A 63 567 567 HOH WAT . 
E 3 HOH A 64 568 568 HOH WAT . 
E 3 HOH A 65 569 569 HOH WAT . 
E 3 HOH A 66 570 570 HOH WAT . 
E 3 HOH A 67 571 571 HOH WAT . 
E 3 HOH A 68 572 572 HOH WAT . 
E 3 HOH A 69 573 573 HOH WAT . 
E 3 HOH A 70 574 574 HOH WAT . 
E 3 HOH A 71 576 576 HOH WAT . 
E 3 HOH A 72 577 577 HOH WAT . 
E 3 HOH A 73 578 578 HOH WAT . 
E 3 HOH A 74 579 579 HOH WAT . 
E 3 HOH A 75 580 580 HOH WAT . 
E 3 HOH A 76 581 581 HOH WAT . 
E 3 HOH A 77 582 582 HOH WAT . 
E 3 HOH A 78 583 583 HOH WAT . 
E 3 HOH A 79 584 584 HOH WAT . 
E 3 HOH A 80 586 586 HOH WAT . 
E 3 HOH A 81 587 587 HOH WAT . 
E 3 HOH A 82 588 588 HOH WAT . 
E 3 HOH A 83 589 589 HOH WAT . 
E 3 HOH A 84 590 590 HOH WAT . 
E 3 HOH A 85 591 591 HOH WAT . 
E 3 HOH A 86 592 592 HOH WAT . 
E 3 HOH A 87 593 593 HOH WAT . 
E 3 HOH A 88 594 594 HOH WAT . 
E 3 HOH A 89 595 595 HOH WAT . 
E 3 HOH A 90 596 596 HOH WAT . 
E 3 HOH A 91 597 597 HOH WAT . 
E 3 HOH A 92 598 598 HOH WAT . 
E 3 HOH A 93 599 599 HOH WAT . 
E 3 HOH A 94 600 600 HOH WAT . 
E 3 HOH A 95 601 601 HOH WAT . 
E 3 HOH A 96 602 602 HOH WAT . 
E 3 HOH A 97 603 603 HOH WAT . 
E 3 HOH A 98 604 604 HOH WAT . 
E 3 HOH A 99 605 605 HOH WAT . 
E 3 HOH A 100 606 606 HOH WAT . 
E 3 HOH A 101 607 607 HOH WAT . 
E 3 HOH A 102 608 608 HOH WAT . 
E 3 HOH A 103 609 609 HOH WAT . 
E 3 HOH A 104 610 610 HOH WAT . 
E 3 HOH A 105 611 611 HOH WAT . 
E 3 HOH A 106 612 612 HOH WAT . 
E 3 HOH A 107 613 613 HOH WAT . 
E 3 HOH A 108 614 614 HOH WAT . 
E 3 HOH A 109 615 615 HOH WAT . 
E 3 HOH A 110 616 616 HOH WAT . 
E 3 HOH A 111 617 617 HOH WAT . 
E 3 HOH A 112 618 618 HOH WAT . 
E 3 HOH A 113 619 619 HOH WAT . 
E 3 HOH A 114 620 620 HOH WAT . 
E 3 HOH A 115 621 621 HOH WAT . 
E 3 HOH A 116 622 622 HOH WAT . 
E 3 HOH A 117 623 623 HOH WAT . 
E 3 HOH A 118 624 624 HOH WAT . 
E 3 HOH A 119 625 625 HOH WAT . 
E 3 HOH A 120 626 626 HOH WAT . 
E 3 HOH A 121 627 627 HOH WAT . 
E 3 HOH A 122 628 628 HOH WAT . 
E 3 HOH A 123 629 629 HOH WAT . 
E 3 HOH A 124 630 630 HOH WAT . 
E 3 HOH A 125 631 631 HOH WAT . 
E 3 HOH A 126 632 632 HOH WAT . 
E 3 HOH A 127 633 633 HOH WAT . 
E 3 HOH A 128 634 634 HOH WAT . 
E 3 HOH A 129 635 635 HOH WAT . 
E 3 HOH A 130 636 636 HOH WAT . 
E 3 HOH A 131 637 637 HOH WAT . 
E 3 HOH A 132 638 638 HOH WAT . 
E 3 HOH A 133 639 639 HOH WAT . 
E 3 HOH A 134 640 640 HOH WAT . 
E 3 HOH A 135 641 641 HOH WAT . 
E 3 HOH A 136 642 642 HOH WAT . 
E 3 HOH A 137 643 643 HOH WAT . 
E 3 HOH A 138 644 644 HOH WAT . 
E 3 HOH A 139 645 645 HOH WAT . 
E 3 HOH A 140 646 646 HOH WAT . 
E 3 HOH A 141 647 647 HOH WAT . 
E 3 HOH A 142 649 649 HOH WAT . 
E 3 HOH A 143 650 650 HOH WAT . 
E 3 HOH A 144 652 652 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . B 2 1.315 15.726 3.465 1 13.48 ? S SO4 501 A 1 
HETATM 2 O O1 SO4 . . . B 2 2.605 16.45 3.713 1 14.62 ? O1 SO4 501 A 1 
HETATM 3 O O2 SO4 . . . B 2 0.431 16.472 2.651 1 18.87 ? O2 SO4 501 A 1 
HETATM 4 O O3 SO4 . . . B 2 0.699 15.304 4.711 1 18.14 ? O3 SO4 501 A 1 
HETATM 5 O O4 SO4 . . . B 2 1.536 14.446 2.682 1 15.6 ? O4 SO4 501 A 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           403 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           5 
#