data_1YW1
#
_model_server_result.job_id            UnCPlC98erwNgJGKa7ZMbw 
_model_server_result.datetime_utc      '2024-12-18 22:38:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1yw1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":2605}' 
#
_entry.id    1YW1 
#
_exptl.entry_id    1YW1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              180.156 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            alpha-D-glucopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1YW1 
_cell.length_a            86.254 
_cell.length_b            86.254 
_cell.length_c            194.64 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1YW1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_465 y-1,x+1,-z 0 1 0 1 0 0 0 0 -1 -86.254 86.254 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ALA 11 A ALA 11 1_555 A N MSE 12 A MSE 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? 
covale ? covale2 A C MSE 12 A MSE 12 1_555 A N ILE 13 A ILE 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale3 A C TYR 39 A TYR 39 1_555 A N MSE 40 A MSE 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale4 A C MSE 40 A MSE 40 1_555 A N LYS 41 A LYS 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale5 A C LEU 110 A LEU 110 1_555 A N MSE 111 A MSE 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale6 A C MSE 111 A MSE 111 1_555 A N SER 112 A SER 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale7 A C GLU 355 A GLU 355 1_555 A N MSE 356 A MSE 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale8 A C MSE 356 A MSE 356 1_555 A N ALA 357 A ALA 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
#
_chem_comp.formula           'C6 H12 O6' 
_chem_comp.formula_weight    180.156 
_chem_comp.id                GLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              alpha-D-glucopyranose 
_chem_comp.type              'd-saccharide, alpha linking' 
_chem_comp.pdbx_synonyms     alpha-D-glucose;D-glucose;glucose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 GLC sing 124 n n 
C1 O1 GLC sing 125 n n 
C1 O5 GLC sing 126 n n 
C1 H1 GLC sing 127 n n 
C2 C3 GLC sing 128 n n 
C2 O2 GLC sing 129 n n 
C2 H2 GLC sing 130 n n 
C3 C4 GLC sing 131 n n 
C3 O3 GLC sing 132 n n 
C3 H3 GLC sing 133 n n 
C4 C5 GLC sing 134 n n 
C4 O4 GLC sing 135 n n 
C4 H4 GLC sing 136 n n 
C5 C6 GLC sing 137 n n 
C5 O5 GLC sing 138 n n 
C5 H5 GLC sing 139 n n 
C6 O6 GLC sing 140 n n 
C6 H61 GLC sing 141 n n 
C6 H62 GLC sing 142 n n 
O1 HO1 GLC sing 143 n n 
O2 HO2 GLC sing 144 n n 
O3 HO3 GLC sing 145 n n 
O4 HO4 GLC sing 146 n n 
O6 HO6 GLC sing 147 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
GLC DGlcpa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
GLC a-D-glucopyranose 'COMMON NAME' GMML 1 
GLC a-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
GLC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     1YW1 
_atom_sites.fract_transf_matrix[1][1]    0.011594 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011594 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005138 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GLC A 1 2605 2605 GLC GLC . 
C 3 FMN A 1 2606 404 FMN FMN . 
D 4 HOH A 1 2607 1 HOH HOH . 
D 4 HOH A 2 2608 2 HOH HOH . 
D 4 HOH A 3 2609 3 HOH HOH . 
D 4 HOH A 4 2610 4 HOH HOH . 
D 4 HOH A 5 2611 5 HOH HOH . 
D 4 HOH A 6 2612 6 HOH HOH . 
D 4 HOH A 7 2613 7 HOH HOH . 
D 4 HOH A 8 2614 8 HOH HOH . 
D 4 HOH A 9 2615 9 HOH HOH . 
D 4 HOH A 10 2616 10 HOH HOH . 
D 4 HOH A 11 2617 11 HOH HOH . 
D 4 HOH A 12 2618 12 HOH HOH . 
D 4 HOH A 13 2619 13 HOH HOH . 
D 4 HOH A 14 2620 14 HOH HOH . 
D 4 HOH A 15 2621 15 HOH HOH . 
D 4 HOH A 16 2622 16 HOH HOH . 
D 4 HOH A 17 2623 17 HOH HOH . 
D 4 HOH A 18 2624 18 HOH HOH . 
D 4 HOH A 19 2625 19 HOH HOH . 
D 4 HOH A 20 2626 20 HOH HOH . 
D 4 HOH A 21 2627 21 HOH HOH . 
D 4 HOH A 22 2628 22 HOH HOH . 
D 4 HOH A 23 2629 23 HOH HOH . 
D 4 HOH A 24 2630 24 HOH HOH . 
D 4 HOH A 25 2631 25 HOH HOH . 
D 4 HOH A 26 2632 26 HOH HOH . 
D 4 HOH A 27 2633 27 HOH HOH . 
D 4 HOH A 28 2634 28 HOH HOH . 
D 4 HOH A 29 2635 29 HOH HOH . 
D 4 HOH A 30 2636 30 HOH HOH . 
D 4 HOH A 31 2637 31 HOH HOH . 
D 4 HOH A 32 2638 32 HOH HOH . 
D 4 HOH A 33 2639 33 HOH HOH . 
D 4 HOH A 34 2640 34 HOH HOH . 
D 4 HOH A 35 2641 35 HOH HOH . 
D 4 HOH A 36 2642 36 HOH HOH . 
D 4 HOH A 37 2643 37 HOH HOH . 
D 4 HOH A 38 2644 38 HOH HOH . 
D 4 HOH A 39 2645 39 HOH HOH . 
D 4 HOH A 40 2646 40 HOH HOH . 
D 4 HOH A 41 2647 41 HOH HOH . 
D 4 HOH A 42 2648 42 HOH HOH . 
D 4 HOH A 43 2649 43 HOH HOH . 
D 4 HOH A 44 2650 44 HOH HOH . 
D 4 HOH A 45 2651 45 HOH HOH . 
D 4 HOH A 46 2652 46 HOH HOH . 
D 4 HOH A 47 2653 47 HOH HOH . 
D 4 HOH A 48 2654 48 HOH HOH . 
D 4 HOH A 49 2655 49 HOH HOH . 
D 4 HOH A 50 2656 50 HOH HOH . 
D 4 HOH A 51 2657 51 HOH HOH . 
D 4 HOH A 52 2658 52 HOH HOH . 
D 4 HOH A 53 2659 53 HOH HOH . 
D 4 HOH A 54 2660 54 HOH HOH . 
D 4 HOH A 55 2661 55 HOH HOH . 
D 4 HOH A 56 2662 56 HOH HOH . 
D 4 HOH A 57 2663 57 HOH HOH . 
D 4 HOH A 58 2664 58 HOH HOH . 
D 4 HOH A 59 2665 59 HOH HOH . 
D 4 HOH A 60 2666 60 HOH HOH . 
D 4 HOH A 61 2667 61 HOH HOH . 
D 4 HOH A 62 2668 62 HOH HOH . 
D 4 HOH A 63 2669 63 HOH HOH . 
D 4 HOH A 64 2670 64 HOH HOH . 
D 4 HOH A 65 2671 65 HOH HOH . 
D 4 HOH A 66 2672 66 HOH HOH . 
D 4 HOH A 67 2673 67 HOH HOH . 
D 4 HOH A 68 2674 68 HOH HOH . 
D 4 HOH A 69 2675 69 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GLC . . . B 2 -11.781 68.999 17.357 1 57.75 ? C1 GLC 2605 A 1 
HETATM 2 C C2 GLC . . . B 2 -10.981 67.924 18.128 1 54.76 ? C2 GLC 2605 A 1 
HETATM 3 C C3 GLC . . . B 2 -11.607 66.532 18.155 1 59.69 ? C3 GLC 2605 A 1 
HETATM 4 C C4 GLC . . . B 2 -13.099 66.687 18.441 1 60.36 ? C4 GLC 2605 A 1 
HETATM 5 C C5 GLC . . . B 2 -13.778 67.541 17.368 1 59.22 ? C5 GLC 2605 A 1 
HETATM 6 C C6 GLC . . . B 2 -15.183 68.046 17.693 1 62.58 ? C6 GLC 2605 A 1 
HETATM 7 O O1 GLC . . . B 2 -11.139 69.729 16.33 1 51.6 ? O1 GLC 2605 A 1 
HETATM 8 O O2 GLC . . . B 2 -9.592 67.815 17.939 1 47.9 ? O2 GLC 2605 A 1 
HETATM 9 O O3 GLC . . . B 2 -10.967 65.625 19.041 1 54.32 ? O3 GLC 2605 A 1 
HETATM 10 O O4 GLC . . . B 2 -13.613 65.381 18.321 1 69.1 ? O4 GLC 2605 A 1 
HETATM 11 O O5 GLC . . . B 2 -13.046 68.628 16.824 1 56.48 ? O5 GLC 2605 A 1 
HETATM 12 O O6 GLC . . . B 2 -15.39 69.207 16.908 1 58.83 ? O6 GLC 2605 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           12 
#