data_1YWV # _model_server_result.job_id fhwSFp2aQ1O223P8vLqPcw _model_server_result.datetime_utc '2024-10-18 00:34:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ywv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 1YWV # _exptl.entry_id 1YWV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1YWV _cell.length_a 99.253 _cell.length_b 99.253 _cell.length_c 80.304 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YWV _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 173 n y N1 C5 IMD sing 174 n y N1 HN1 IMD sing 175 n n C2 N3 IMD doub 176 n y C2 H2 IMD sing 177 n n N3 C4 IMD sing 178 n y N3 HN3 IMD sing 179 n n C4 C5 IMD doub 180 n y C4 H4 IMD sing 181 n n C5 H5 IMD sing 182 n n # _atom_sites.entry_id 1YWV _atom_sites.fract_transf_matrix[1][1] 0.010075 _atom_sites.fract_transf_matrix[1][2] 0.005817 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011634 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012453 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IMD A 1 1001 1 IMD IMD . C 3 HOH A 1 1002 1 HOH HOH . C 3 HOH A 2 1003 2 HOH HOH . C 3 HOH A 3 1004 3 HOH HOH . C 3 HOH A 4 1005 4 HOH HOH . C 3 HOH A 5 1006 5 HOH HOH . C 3 HOH A 6 1007 6 HOH HOH . C 3 HOH A 7 1008 7 HOH HOH . C 3 HOH A 8 1009 8 HOH HOH . C 3 HOH A 9 1010 9 HOH HOH . C 3 HOH A 10 1011 10 HOH HOH . C 3 HOH A 11 1012 11 HOH HOH . C 3 HOH A 12 1013 12 HOH HOH . C 3 HOH A 13 1014 13 HOH HOH . C 3 HOH A 14 1015 14 HOH HOH . C 3 HOH A 15 1016 15 HOH HOH . C 3 HOH A 16 1017 16 HOH HOH . C 3 HOH A 17 1018 17 HOH HOH . C 3 HOH A 18 1019 18 HOH HOH . C 3 HOH A 19 1020 19 HOH HOH . C 3 HOH A 20 1021 20 HOH HOH . C 3 HOH A 21 1022 21 HOH HOH . C 3 HOH A 22 1023 22 HOH HOH . C 3 HOH A 23 1024 23 HOH HOH . C 3 HOH A 24 1025 24 HOH HOH . C 3 HOH A 25 1026 25 HOH HOH . C 3 HOH A 26 1027 26 HOH HOH . C 3 HOH A 27 1028 27 HOH HOH . C 3 HOH A 28 1029 28 HOH HOH . C 3 HOH A 29 1030 29 HOH HOH . C 3 HOH A 30 1031 30 HOH HOH . C 3 HOH A 31 1032 31 HOH HOH . C 3 HOH A 32 1033 32 HOH HOH . C 3 HOH A 33 1034 33 HOH HOH . C 3 HOH A 34 1035 34 HOH HOH . C 3 HOH A 35 1036 35 HOH HOH . C 3 HOH A 36 1037 36 HOH HOH . C 3 HOH A 37 1038 37 HOH HOH . C 3 HOH A 38 1039 38 HOH HOH . C 3 HOH A 39 1040 39 HOH HOH . C 3 HOH A 40 1041 40 HOH HOH . C 3 HOH A 41 1042 41 HOH HOH . C 3 HOH A 42 1043 42 HOH HOH . C 3 HOH A 43 1044 43 HOH HOH . C 3 HOH A 44 1045 44 HOH HOH . C 3 HOH A 45 1046 45 HOH HOH . C 3 HOH A 46 1047 46 HOH HOH . C 3 HOH A 47 1048 47 HOH HOH . C 3 HOH A 48 1049 48 HOH HOH . C 3 HOH A 49 1050 49 HOH HOH . C 3 HOH A 50 1051 50 HOH HOH . C 3 HOH A 51 1052 51 HOH HOH . C 3 HOH A 52 1053 52 HOH HOH . C 3 HOH A 53 1054 53 HOH HOH . C 3 HOH A 54 1055 54 HOH HOH . C 3 HOH A 55 1056 55 HOH HOH . C 3 HOH A 56 1057 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . B 2 65.962 29.16 12.925 1 56.38 ? N1 IMD 1001 A 1 HETATM 2 C C2 IMD . . . B 2 66.473 30.325 13.401 1 56.67 ? C2 IMD 1001 A 1 HETATM 3 N N3 IMD . . . B 2 66.769 30.17 14.718 1 56.89 ? N3 IMD 1001 A 1 HETATM 4 C C4 IMD . . . B 2 66.446 28.908 15.085 1 57.1 ? C4 IMD 1001 A 1 HETATM 5 C C5 IMD . . . B 2 65.935 28.277 13.951 1 57.15 ? C5 IMD 1001 A 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 5 #