data_1YYV # _model_server_result.job_id RTvfPddxgBiUfdWfWRrTxg _model_server_result.datetime_utc '2024-11-05 04:40:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1yyv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 1YYV # _exptl.entry_id 1YYV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1YYV _cell.length_a 79.285 _cell.length_b 79.285 _cell.length_c 105.115 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YYV _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 56 A ARG 53 1_555 A N MLY 57 A MLY 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale2 A C MLY 57 A MLY 54 1_555 A N MSE 58 A MSE 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale3 A C MSE 58 A MSE 55 1_555 A N GLY 59 A GLY 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C GLU 63 A GLU 60 1_555 A N MLY 64 A MLY 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale5 A C MLY 64 A MLY 61 1_555 A N MSE 65 A MSE 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 A C MSE 65 A MSE 62 1_555 A N LEU 66 A LEU 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale7 A C ASP 104 A ASP 101 1_555 A N MLY 105 A MLY 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale8 A C MLY 105 A MLY 102 1_555 A N VAL 106 A VAL 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale9 B C ARG 56 B ARG 53 1_555 B N MLY 57 B MLY 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale10 B C MLY 57 B MLY 54 1_555 B N MSE 58 B MSE 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale11 B C MSE 58 B MSE 55 1_555 B N GLY 59 B GLY 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale12 B C GLU 63 B GLU 60 1_555 B N MLY 64 B MLY 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale13 B C MLY 64 B MLY 61 1_555 B N MSE 65 B MSE 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale14 B C MSE 65 B MSE 62 1_555 B N LEU 66 B LEU 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale15 B C ASP 104 B ASP 101 1_555 B N MLY 105 B MLY 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale16 B C MLY 105 B MLY 102 1_555 B N VAL 106 B VAL 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1YYV _atom_sites.fract_transf_matrix[1][1] 0.012613 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012613 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009513 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 202 202 CL CL . D 2 CL B 1 201 201 CL CL . E 3 HOH A 1 203 6 HOH HOH . E 3 HOH A 2 204 9 HOH HOH . E 3 HOH A 3 205 10 HOH HOH . E 3 HOH A 4 206 14 HOH HOH . E 3 HOH A 5 207 24 HOH HOH . E 3 HOH A 6 208 25 HOH HOH . E 3 HOH A 7 209 26 HOH HOH . E 3 HOH A 8 210 27 HOH HOH . E 3 HOH A 9 211 29 HOH HOH . E 3 HOH A 10 212 30 HOH HOH . E 3 HOH A 11 213 33 HOH HOH . E 3 HOH A 12 214 34 HOH HOH . E 3 HOH A 13 215 36 HOH HOH . E 3 HOH A 14 216 37 HOH HOH . E 3 HOH A 15 217 39 HOH HOH . E 3 HOH A 16 218 40 HOH HOH . E 3 HOH A 17 219 41 HOH HOH . E 3 HOH A 18 220 44 HOH HOH . E 3 HOH A 19 221 48 HOH HOH . E 3 HOH A 20 222 49 HOH HOH . E 3 HOH A 21 223 50 HOH HOH . E 3 HOH A 22 224 51 HOH HOH . E 3 HOH A 23 225 53 HOH HOH . E 3 HOH A 24 226 54 HOH HOH . E 3 HOH A 25 227 56 HOH HOH . E 3 HOH A 26 228 57 HOH HOH . E 3 HOH A 27 229 58 HOH HOH . E 3 HOH A 28 230 59 HOH HOH . E 3 HOH A 29 231 60 HOH HOH . E 3 HOH A 30 232 62 HOH HOH . E 3 HOH A 31 233 63 HOH HOH . E 3 HOH A 32 234 67 HOH HOH . E 3 HOH A 33 235 68 HOH HOH . E 3 HOH A 34 236 70 HOH HOH . E 3 HOH A 35 237 71 HOH HOH . F 3 HOH B 1 202 1 HOH HOH . F 3 HOH B 2 203 2 HOH HOH . F 3 HOH B 3 204 3 HOH HOH . F 3 HOH B 4 205 4 HOH HOH . F 3 HOH B 5 206 5 HOH HOH . F 3 HOH B 6 207 7 HOH HOH . F 3 HOH B 7 208 8 HOH HOH . F 3 HOH B 8 209 11 HOH HOH . F 3 HOH B 9 210 12 HOH HOH . F 3 HOH B 10 211 13 HOH HOH . F 3 HOH B 11 212 15 HOH HOH . F 3 HOH B 12 213 16 HOH HOH . F 3 HOH B 13 214 17 HOH HOH . F 3 HOH B 14 215 18 HOH HOH . F 3 HOH B 15 216 19 HOH HOH . F 3 HOH B 16 217 20 HOH HOH . F 3 HOH B 17 218 21 HOH HOH . F 3 HOH B 18 219 22 HOH HOH . F 3 HOH B 19 220 23 HOH HOH . F 3 HOH B 20 221 28 HOH HOH . F 3 HOH B 21 222 31 HOH HOH . F 3 HOH B 22 223 32 HOH HOH . F 3 HOH B 23 224 35 HOH HOH . F 3 HOH B 24 225 38 HOH HOH . F 3 HOH B 25 226 42 HOH HOH . F 3 HOH B 26 227 43 HOH HOH . F 3 HOH B 27 228 45 HOH HOH . F 3 HOH B 28 229 46 HOH HOH . F 3 HOH B 29 230 47 HOH HOH . F 3 HOH B 30 231 52 HOH HOH . F 3 HOH B 31 232 55 HOH HOH . F 3 HOH B 32 233 61 HOH HOH . F 3 HOH B 33 234 64 HOH HOH . F 3 HOH B 34 235 65 HOH HOH . F 3 HOH B 35 236 66 HOH HOH . F 3 HOH B 36 237 69 HOH HOH . F 3 HOH B 37 238 72 HOH HOH . F 3 HOH B 38 239 73 HOH HOH . F 3 HOH B 39 240 75 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 27.328 _atom_site.Cartn_y 19.472 _atom_site.Cartn_z 29.412 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 54.85 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #